Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15905

Experiment: pH4.8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.8
3,483,343	+		LRK53_RS15900	0.52	+0.0
3,483,344	-		LRK53_RS15900	0.52	+0.4
3,483,378	+		LRK53_RS15900	0.54	+0.0
3,483,378	+		LRK53_RS15900	0.54	+0.1
3,483,378	+		LRK53_RS15900	0.54	+0.0
3,483,378	+		LRK53_RS15900	0.54	-0.5
3,483,378	+		LRK53_RS15900	0.54	-1.8
3,483,379	-		LRK53_RS15900	0.54	-0.5
3,483,414	+		LRK53_RS15900	0.56	+0.5
3,483,414	+		LRK53_RS15900	0.56	+1.0
3,483,414	+		LRK53_RS15900	0.56	+0.0
3,483,414	+		LRK53_RS15900	0.56	-1.0
3,483,415	-		LRK53_RS15900	0.56	-0.5
3,483,415	-		LRK53_RS15900	0.56	+3.0
3,483,415	-		LRK53_RS15900	0.56	-0.5
3,483,535	+		LRK53_RS15900	0.63	-0.5
3,483,535	+		LRK53_RS15900	0.63	-1.5
3,483,535	+		LRK53_RS15900	0.63	-1.0
3,483,535	+		LRK53_RS15900	0.63	-1.0
3,483,535	+		LRK53_RS15900	0.63	-0.3
3,483,535	+		LRK53_RS15900	0.63	-1.0
3,483,535	+		LRK53_RS15900	0.63	-0.2
3,483,535	+		LRK53_RS15900	0.63	-0.4
3,483,535	+		LRK53_RS15900	0.63	-0.1
3,483,535	+		LRK53_RS15900	0.63	-1.5
3,483,535	+		LRK53_RS15900	0.63	-0.7
3,483,536	-		LRK53_RS15900	0.63	-0.7
3,483,536	-		LRK53_RS15900	0.63	-1.3
3,483,536	-		LRK53_RS15900	0.63	+1.0
3,483,536	-		LRK53_RS15900	0.63	-2.1
3,483,536	-		LRK53_RS15900	0.63	-1.5
3,483,536	-		LRK53_RS15900	0.63	-2.2
3,483,987	+		LRK53_RS15900	0.88	-2.1
3,483,987	+		LRK53_RS15900	0.88	-0.5
3,483,987	+		LRK53_RS15900	0.88	+0.3
3,483,987	+		LRK53_RS15900	0.88	-0.4
3,483,987	+		LRK53_RS15900	0.88	-1.3
3,483,987	+		LRK53_RS15900	0.88	-1.3
3,483,987	+		LRK53_RS15900	0.88	-1.7
3,483,988	-		LRK53_RS15900	0.88	+1.0
3,483,988	-		LRK53_RS15900	0.88	-1.3
3,483,988	-		LRK53_RS15900	0.88	-1.1
3,483,988	-		LRK53_RS15900	0.88	-0.9
3,483,988	-		LRK53_RS15900	0.88	-0.5
3,483,988	-		LRK53_RS15900	0.88	-2.9
3,484,276	+				-1.2
3,484,276	+				-0.5
3,484,276	+				-0.4
3,484,276	+				-0.9
3,484,277	-				+0.5
3,484,762	+		LRK53_RS15905	0.11	-1.0
3,484,762	+		LRK53_RS15905	0.11	-0.8
3,484,762	+		LRK53_RS15905	0.11	-1.0
3,484,762	+		LRK53_RS15905	0.11	-1.4
3,484,762	+		LRK53_RS15905	0.11	-0.7
3,484,762	+		LRK53_RS15905	0.11	-2.4
3,484,763	-		LRK53_RS15905	0.11	+0.2
3,484,763	-		LRK53_RS15905	0.11	-1.3
3,484,763	-		LRK53_RS15905	0.11	+0.5
3,484,763	-		LRK53_RS15905	0.11	+0.5
3,484,763	-		LRK53_RS15905	0.11	+1.0
3,484,763	-		LRK53_RS15905	0.11	-0.8
3,484,763	-		LRK53_RS15905	0.11	-1.5
3,484,962	+		LRK53_RS15905	0.17	+0.0
3,484,962	+		LRK53_RS15905	0.17	-0.3
3,484,962	+		LRK53_RS15905	0.17	-1.4
3,484,962	+		LRK53_RS15905	0.17	+0.2
3,484,962	+		LRK53_RS15905	0.17	+1.0
3,484,963	-		LRK53_RS15905	0.17	-1.3
3,484,963	-		LRK53_RS15905	0.17	-0.8
3,485,074	-		LRK53_RS15905	0.20	-2.1
3,485,074	-		LRK53_RS15905	0.20	-1.0
3,485,265	+		LRK53_RS15905	0.25	-1.0
3,485,266	-		LRK53_RS15905	0.25	-0.3
3,485,866	+		LRK53_RS15905	0.41	-1.8
3,485,866	+		LRK53_RS15905	0.41	-2.3
3,485,866	+		LRK53_RS15905	0.41	-0.5
3,485,867	-		LRK53_RS15905	0.41	-1.0
3,485,867	-		LRK53_RS15905	0.41	+0.8
3,485,867	-		LRK53_RS15905	0.41	+0.0
3,486,375	+		LRK53_RS15905	0.54	-1.2
3,486,375	+		LRK53_RS15905	0.54	-0.5
3,486,375	+		LRK53_RS15905	0.54	+2.0
3,486,375	+		LRK53_RS15905	0.54	+2.0
3,486,375	+		LRK53_RS15905	0.54	-1.5
3,486,375	+		LRK53_RS15905	0.54	+0.0
3,486,376	-		LRK53_RS15905	0.54	+1.0
3,486,376	-		LRK53_RS15905	0.54	-1.3
3,486,376	-		LRK53_RS15905	0.54	-0.5
3,486,376	-		LRK53_RS15905	0.54	+0.5
3,486,376	-		LRK53_RS15905	0.54	-0.8
3,486,376	-		LRK53_RS15905	0.54	-1.0
3,486,480	+		LRK53_RS15905	0.57	-1.5
3,486,648	+		LRK53_RS15905	0.62	-0.5
3,486,648	+		LRK53_RS15905	0.62	-0.1
3,486,648	+		LRK53_RS15905	0.62	-1.9
3,486,648	+		LRK53_RS15905	0.62	+0.0
3,486,648	+		LRK53_RS15905	0.62	-1.0
3,486,649	-		LRK53_RS15905	0.62	-0.2
3,486,649	-		LRK53_RS15905	0.62	-0.3
3,486,649	-		LRK53_RS15905	0.62	-2.1
3,486,649	-		LRK53_RS15905	0.62	-1.1
3,486,649	-		LRK53_RS15905	0.62	+2.0
3,486,660	-		LRK53_RS15905	0.62	-1.0
3,486,660	-		LRK53_RS15905	0.62	+1.6
3,486,861	-		LRK53_RS15905	0.67	-0.8
3,487,273	+		LRK53_RS15905	0.78	-1.8
3,487,273	+		LRK53_RS15905	0.78	+0.6
3,487,273	+		LRK53_RS15905	0.78	-0.8
3,487,273	+		LRK53_RS15905	0.78	-1.5
3,487,273	+		LRK53_RS15905	0.78	+1.8
3,487,273	+		LRK53_RS15905	0.78	-1.5
3,487,273	+		LRK53_RS15905	0.78	+1.0
3,487,273	+		LRK53_RS15905	0.78	-1.1
3,487,273	+		LRK53_RS15905	0.78	-1.9
3,487,273	+		LRK53_RS15905	0.78	-1.7
3,487,273	+		LRK53_RS15905	0.78	-1.8
3,487,273	+		LRK53_RS15905	0.78	-0.8
3,487,273	+		LRK53_RS15905	0.78	-0.5
3,487,273	+		LRK53_RS15905	0.78	-1.3
3,487,273	+		LRK53_RS15905	0.78	-1.0
3,487,273	+		LRK53_RS15905	0.78	+2.0
3,487,273	+		LRK53_RS15905	0.78	-0.9
3,487,273	+		LRK53_RS15905	0.78	-1.0
3,487,273	+		LRK53_RS15905	0.78	-0.7
3,487,273	+		LRK53_RS15905	0.78	+0.0
3,487,273	+		LRK53_RS15905	0.78	-1.4
3,487,273	+		LRK53_RS15905	0.78	-0.2
3,487,273	+		LRK53_RS15905	0.78	-1.1
3,487,273	+		LRK53_RS15905	0.78	-0.5
3,487,273	+		LRK53_RS15905	0.78	-1.5
3,487,273	+		LRK53_RS15905	0.78	-1.4
3,487,273	+		LRK53_RS15905	0.78	-0.1
3,487,273	+		LRK53_RS15905	0.78	-0.5
3,487,273	+		LRK53_RS15905	0.78	+1.0
3,487,273	+		LRK53_RS15905	0.78	+0.0
3,487,273	+		LRK53_RS15905	0.78	-0.5
3,487,273	+		LRK53_RS15905	0.78	-0.5
3,487,273	+		LRK53_RS15905	0.78	-1.3
3,487,273	+		LRK53_RS15905	0.78	-0.2
3,487,273	+		LRK53_RS15905	0.78	+1.6
3,487,273	+		LRK53_RS15905	0.78	+0.0
3,487,273	+		LRK53_RS15905	0.78	+1.0
3,487,273	+		LRK53_RS15905	0.78	-1.3
3,487,273	+		LRK53_RS15905	0.78	-0.6
3,487,274	-		LRK53_RS15905	0.78	-1.3
3,487,274	-		LRK53_RS15905	0.78	-0.2
3,487,274	-		LRK53_RS15905	0.78	-0.9
3,487,274	-		LRK53_RS15905	0.78	-1.1
3,487,274	-		LRK53_RS15905	0.78	+0.5
3,487,274	-		LRK53_RS15905	0.78	-0.4
3,487,274	-		LRK53_RS15905	0.78	-2.5
3,487,274	-		LRK53_RS15905	0.78	-0.4
3,487,274	-		LRK53_RS15905	0.78	+2.6
3,487,274	-		LRK53_RS15905	0.78	-1.0
3,487,274	-		LRK53_RS15905	0.78	-0.7
3,487,274	-		LRK53_RS15905	0.78	-1.0
3,487,274	-		LRK53_RS15905	0.78	-1.8
3,487,274	-		LRK53_RS15905	0.78	+0.7
3,487,274	-		LRK53_RS15905	0.78	+0.0
3,487,274	-		LRK53_RS15905	0.78	+1.0
3,487,274	-		LRK53_RS15905	0.78	+0.0
3,487,274	-		LRK53_RS15905	0.78	-1.0
3,487,274	-		LRK53_RS15905	0.78	+2.0
3,487,274	-		LRK53_RS15905	0.78	+0.6
3,487,274	-		LRK53_RS15905	0.78	+0.0
3,487,274	-		LRK53_RS15905	0.78	-1.1
3,487,274	-		LRK53_RS15905	0.78	+0.0
3,487,274	-		LRK53_RS15905	0.78	-0.7
3,487,274	-		LRK53_RS15905	0.78	+0.0
3,487,274	-		LRK53_RS15905	0.78	+1.0
3,487,442	+		LRK53_RS15905	0.83	+0.5
3,487,442	+		LRK53_RS15905	0.83	-1.1
3,487,442	+		LRK53_RS15905	0.83	+1.0
3,487,506	+		LRK53_RS15905	0.85	-0.5
3,487,506	+		LRK53_RS15905	0.85	-0.2
3,487,506	+		LRK53_RS15905	0.85	+0.0
3,487,506	+		LRK53_RS15905	0.85	-1.7
3,487,507	-		LRK53_RS15905	0.85	-2.1
3,487,507	-		LRK53_RS15905	0.85	-2.1
3,487,507	-		LRK53_RS15905	0.85	+1.0
3,487,507	-		LRK53_RS15905	0.85	-1.2
3,487,507	-		LRK53_RS15905	0.85	-1.0
3,487,507	-		LRK53_RS15905	0.85	+0.2
3,487,507	-		LRK53_RS15905	0.85	-1.1
3,487,507	-		LRK53_RS15905	0.85	-1.9
3,487,507	-		LRK53_RS15905	0.85	+0.0
3,487,507	-		LRK53_RS15905	0.85	-1.0
3,487,507	-		LRK53_RS15905	0.85	-1.0
3,487,507	-		LRK53_RS15905	0.85	-1.7
3,487,515	+		LRK53_RS15905	0.85	+1.5
3,487,515	+		LRK53_RS15905	0.85	-0.4
3,487,516	-		LRK53_RS15905	0.85	-1.2
3,487,516	-		LRK53_RS15905	0.85	+0.3
3,487,516	-		LRK53_RS15905	0.85	-0.5
3,487,731	+				-0.9
3,487,731	+				-1.0
3,487,731	+				+0.2
3,487,731	+				-1.0
3,487,731	+				-1.7
3,487,732	-				+1.0
3,487,732	-				-1.1
3,487,762	+				+0.6
3,487,762	+				+0.0
3,487,762	+				-1.8
3,487,763	-				+0.0
3,487,763	-				-1.0
3,487,926	+				+0.0
3,487,926	+				+0.0
3,487,926	+				+2.0
3,487,926	+				-2.2
3,487,926	+				-0.5
3,487,926	+				-0.5
3,487,926	+				+1.0
3,487,926	+				-0.5
3,487,926	+				+0.2
3,487,926	+				-1.1
3,487,927	-				-1.0
3,487,927	-				-1.0
3,487,927	-				+0.0
3,487,927	-				+0.0
3,487,927	-				+1.0
3,487,927	-				+0.0
3,487,927	-				-0.4
3,487,927	-				-0.7
3,487,927	-				-2.1
3,487,927	-				-0.5
3,487,944	+				-0.5
3,487,944	+				-0.7
3,487,944	+				-0.5
3,487,944	+				-1.3
3,487,945	-				-0.5
3,487,945	-				-1.0
3,487,945	-				-1.2
3,487,945	-				-0.5
3,487,945	-				+1.5
3,487,945	-				-2.0
3,487,954	-				-1.1
3,487,954	-				-1.9
3,487,954	-				-0.9
3,487,954	-				-0.2
3,488,067	+				-0.5
3,488,068	-				+0.0
3,488,153	+				-0.4
3,488,154	-				-0.9
3,488,154	-				-0.8
3,488,206	+				-0.5
3,488,206	+				+0.0
3,488,496	+		LRK53_RS15910	0.15	+1.6
3,488,496	+		LRK53_RS15910	0.15	-1.2
3,488,497	-		LRK53_RS15910	0.15	-1.0
3,488,497	-		LRK53_RS15910	0.15	-2.0
3,488,497	-		LRK53_RS15910	0.15	-1.3
3,488,497	-		LRK53_RS15910	0.15	+0.5
3,488,497	-		LRK53_RS15910	0.15	-1.1
3,488,497	-		LRK53_RS15910	0.15	+1.0
3,488,499	+		LRK53_RS15910	0.15	-1.0
3,488,499	+		LRK53_RS15910	0.15	-0.3
3,488,500	-		LRK53_RS15910	0.15	-1.3
3,488,500	-		LRK53_RS15910	0.15	+0.0
3,488,500	-		LRK53_RS15910	0.15	-0.3
3,488,727	+		LRK53_RS15910	0.26	-0.3
3,488,727	+		LRK53_RS15910	0.26	-0.8
3,488,727	+		LRK53_RS15910	0.26	-1.0
3,488,728	-		LRK53_RS15910	0.26	-0.5
3,488,728	-		LRK53_RS15910	0.26	+2.6
3,488,766	+		LRK53_RS15910	0.28	+0.6
3,488,766	+		LRK53_RS15910	0.28	-0.6
3,488,766	+		LRK53_RS15910	0.28	-1.8
3,488,766	+		LRK53_RS15910	0.28	-0.8
3,488,766	+		LRK53_RS15910	0.28	-0.5
3,488,767	-		LRK53_RS15910	0.28	-0.3
3,488,767	-		LRK53_RS15910	0.28	-1.3
3,488,767	-		LRK53_RS15910	0.28	-1.1
3,488,767	-		LRK53_RS15910	0.28	-0.7
3,488,769	+		LRK53_RS15910	0.28	-0.3
3,488,769	+		LRK53_RS15910	0.28	-1.0
3,488,769	+		LRK53_RS15910	0.28	-0.8
3,488,769	+		LRK53_RS15910	0.28	-1.8
3,488,769	+		LRK53_RS15910	0.28	+1.0
3,488,769	+		LRK53_RS15910	0.28	+1.6
3,488,769	+		LRK53_RS15910	0.28	+3.8
3,488,769	+		LRK53_RS15910	0.28	+1.0
3,488,769	+		LRK53_RS15910	0.28	+1.0
3,488,769	+		LRK53_RS15910	0.28	+0.7
3,488,769	+		LRK53_RS15910	0.28	-0.3
3,488,769	+		LRK53_RS15910	0.28	+0.0
3,488,769	+		LRK53_RS15910	0.28	+0.3
3,488,769	+		LRK53_RS15910	0.28	+0.0
3,488,769	+		LRK53_RS15910	0.28	+1.0
3,488,769	+		LRK53_RS15910	0.28	-0.0
3,488,769	+		LRK53_RS15910	0.28	-0.3
3,488,769	+		LRK53_RS15910	0.28	-0.5
3,488,769	+		LRK53_RS15910	0.28	-1.5
3,488,769	+		LRK53_RS15910	0.28	-2.0
3,488,769	+		LRK53_RS15910	0.28	+0.0
3,488,770	-		LRK53_RS15910	0.28	-0.5
3,488,770	-		LRK53_RS15910	0.28	+0.5
3,488,770	-		LRK53_RS15910	0.28	-0.3
3,488,770	-		LRK53_RS15910	0.28	-0.8
3,488,770	-		LRK53_RS15910	0.28	-0.5
3,488,770	-		LRK53_RS15910	0.28	+0.5
3,488,770	-		LRK53_RS15910	0.28	+1.0
3,488,811	+		LRK53_RS15910	0.30	-0.2
3,488,811	+		LRK53_RS15910	0.30	-1.0
3,488,811	+		LRK53_RS15910	0.30	-1.3
3,488,811	+		LRK53_RS15910	0.30	+0.2
3,488,811	+		LRK53_RS15910	0.30	-1.3
3,488,811	+		LRK53_RS15910	0.30	-0.9
3,488,811	+		LRK53_RS15910	0.30	+0.4
3,488,811	+		LRK53_RS15910	0.30	+2.0
3,488,811	+		LRK53_RS15910	0.30	+1.6
3,488,812	-		LRK53_RS15910	0.30	-0.7
3,488,812	-		LRK53_RS15910	0.30	-0.4
3,488,812	-		LRK53_RS15910	0.30	+0.0
3,488,812	-		LRK53_RS15910	0.30	+0.3
3,488,812	-		LRK53_RS15910	0.30	+1.0
3,488,812	-		LRK53_RS15910	0.30	+0.6
3,488,820	+		LRK53_RS15910	0.31	+0.6
3,488,820	+		LRK53_RS15910	0.31	+0.0
3,488,820	+		LRK53_RS15910	0.31	+0.2
3,488,820	+		LRK53_RS15910	0.31	+0.0
3,488,820	+		LRK53_RS15910	0.31	-0.3
3,488,820	+		LRK53_RS15910	0.31	-0.4
3,488,820	+		LRK53_RS15910	0.31	-0.3
3,488,820	+		LRK53_RS15910	0.31	+0.0
3,488,820	+		LRK53_RS15910	0.31	+0.6
3,488,820	+		LRK53_RS15910	0.31	+1.0
3,488,820	+		LRK53_RS15910	0.31	-2.3
3,488,820	+		LRK53_RS15910	0.31	-0.7
3,488,820	+		LRK53_RS15910	0.31	-0.8
3,488,821	-		LRK53_RS15910	0.31	-1.0
3,488,821	-		LRK53_RS15910	0.31	+2.0
3,488,821	-		LRK53_RS15910	0.31	+0.7
3,488,821	-		LRK53_RS15910	0.31	+0.0
3,488,821	-		LRK53_RS15910	0.31	+2.0
3,488,821	-		LRK53_RS15910	0.31	-0.4
3,488,821	-		LRK53_RS15910	0.31	-1.0
3,488,821	-		LRK53_RS15910	0.31	-0.3
3,488,821	-		LRK53_RS15910	0.31	+0.0
3,488,939	+		LRK53_RS15910	0.37	+1.6
3,488,940	-		LRK53_RS15910	0.37	-0.5
3,489,012	+		LRK53_RS15910	0.40	+1.0
3,489,012	+		LRK53_RS15910	0.40	+1.0
3,489,012	+		LRK53_RS15910	0.40	-0.5
3,489,012	+		LRK53_RS15910	0.40	+0.2
3,489,012	+		LRK53_RS15910	0.40	+0.0
3,489,013	-		LRK53_RS15910	0.40	-0.5
3,489,013	-		LRK53_RS15910	0.40	-1.4
3,489,013	-		LRK53_RS15910	0.40	+0.2