Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08665

Experiment: pH4.8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.8
1,945,642	+		LRK53_RS08655	0.80	+0.6
1,945,642	+		LRK53_RS08655	0.80	+1.5
1,945,642	+		LRK53_RS08655	0.80	+0.6
1,945,642	+		LRK53_RS08655	0.80	-0.7
1,945,642	+		LRK53_RS08655	0.80	+0.5
1,945,642	+		LRK53_RS08655	0.80	-0.5
1,945,642	+		LRK53_RS08655	0.80	+0.3
1,945,642	+		LRK53_RS08655	0.80	+0.9
1,945,642	+		LRK53_RS08655	0.80	-1.4
1,945,642	+		LRK53_RS08655	0.80	-0.1
1,945,643	-		LRK53_RS08655	0.80	+0.9
1,945,643	-		LRK53_RS08655	0.80	-1.1
1,945,643	-		LRK53_RS08655	0.80	-0.9
1,945,643	-		LRK53_RS08655	0.80	+0.3
1,945,643	-		LRK53_RS08655	0.80	+1.2
1,945,643	-		LRK53_RS08655	0.80	-1.6
1,945,643	-		LRK53_RS08655	0.80	+0.2
1,945,643	-		LRK53_RS08655	0.80	-1.1
1,945,643	-		LRK53_RS08655	0.80	-0.4
1,945,643	-		LRK53_RS08655	0.80	-1.1
1,945,906	+				+0.9
1,945,906	+				-0.7
1,945,906	+				-1.1
1,945,906	+				-2.5
1,946,012	+				-0.7
1,946,013	-				-0.4
1,946,013	-				-0.8
1,946,014	+				-1.4
1,946,019	+				-1.1
1,946,020	-				-1.1
1,946,020	-				-0.1
1,946,020	-				-0.1
1,946,023	-				-1.7
1,946,023	-				-1.4
1,946,048	+				+0.9
1,946,077	+				-1.2
1,946,077	+				-1.3
1,946,077	+				-0.3
1,946,078	-				+0.3
1,946,078	-				+0.9
1,946,078	-				-1.1
1,946,078	-				-0.9
1,946,098	+				-0.7
1,946,098	+				-0.7
1,946,098	+				+0.9
1,946,099	-				+0.2
1,946,099	-				-1.2
1,946,099	-				+0.9
1,946,176	+				+1.5
1,946,176	+				-1.0
1,946,176	+				+0.3
1,946,177	-				+0.5
1,946,177	-				-0.1
1,946,177	-				-0.7
1,946,177	-				-1.0
1,946,197	+		LRK53_RS08660	0.14	-0.1
1,946,198	-		LRK53_RS08660	0.14	-1.1
1,946,198	-		LRK53_RS08660	0.14	-0.1
1,946,198	-		LRK53_RS08660	0.14	+0.2
1,946,198	-		LRK53_RS08660	0.14	+0.9
1,946,390	+		LRK53_RS08660	0.56	-0.1
1,946,391	-		LRK53_RS08660	0.56	-1.3
1,946,391	-		LRK53_RS08660	0.56	+1.5
1,946,391	-		LRK53_RS08660	0.56	-0.9
1,946,391	-		LRK53_RS08660	0.56	+0.9
1,946,391	-		LRK53_RS08660	0.56	+0.9
1,946,425	+		LRK53_RS08660	0.63	+0.4
1,946,425	+		LRK53_RS08660	0.63	+0.3
1,946,425	+		LRK53_RS08660	0.63	-0.6
1,946,425	+		LRK53_RS08660	0.63	-1.1
1,946,425	+		LRK53_RS08660	0.63	-0.7
1,946,426	-		LRK53_RS08660	0.63	-2.1
1,946,552	+				-0.9
1,946,552	+				+0.3
1,946,552	+				+0.6
1,946,552	+				-1.0
1,946,552	+				-1.4
1,946,552	+				-1.5
1,946,552	+				+0.1
1,946,552	+				-1.1
1,946,552	+				-1.7
1,946,552	+				-1.1
1,946,552	+				-0.1
1,946,552	+				-0.1
1,946,553	-				+1.4
1,946,553	-				-0.3
1,946,553	-				+0.9
1,946,553	-				-0.1
1,946,553	-				-1.7
1,946,553	-				-0.9
1,946,553	-				-0.9
1,946,553	-				-1.8
1,946,575	+				-2.4
1,946,575	+				-0.4
1,946,576	-				-0.7
1,946,576	-				-0.1
1,946,576	-				+0.9
1,946,650	+		LRK53_RS08665	0.29	-1.4
1,946,752	+		LRK53_RS08665	0.79	-1.2
1,946,752	+		LRK53_RS08665	0.79	-0.7
1,946,752	+		LRK53_RS08665	0.79	+0.6
1,946,753	-		LRK53_RS08665	0.79	-0.7
1,946,753	-		LRK53_RS08665	0.79	-0.1
1,946,794	+				-0.8
1,946,794	+				-0.1
1,946,794	+				-0.1
1,946,795	-				-1.3
1,946,795	-				-1.7
1,946,795	-				-0.8
1,946,795	-				-0.9
1,946,809	+				+1.9
1,946,928	+				+0.9
1,946,928	+				-0.7
1,946,929	-				+0.9
1,946,929	-				-0.7
1,946,929	-				+1.2
1,946,929	-				+0.6
1,947,001	+		LRK53_RS08670	0.18	-1.7
1,947,001	+		LRK53_RS08670	0.18	-1.4
1,947,001	+		LRK53_RS08670	0.18	+2.5
1,947,001	+		LRK53_RS08670	0.18	-0.5
1,947,002	-		LRK53_RS08670	0.19	-1.7
1,947,002	-		LRK53_RS08670	0.19	+0.9
1,947,002	-		LRK53_RS08670	0.19	+0.2
1,947,002	-		LRK53_RS08670	0.19	-0.7
1,947,058	+		LRK53_RS08670	0.32	+1.9
1,947,059	-		LRK53_RS08670	0.32	-0.1
1,947,059	-		LRK53_RS08670	0.32	-0.7
1,947,059	-		LRK53_RS08670	0.32	-1.1
1,947,528	+				-0.1
1,947,528	+				-0.4
1,947,528	+				-0.3
1,947,528	+				+0.1
1,947,528	+				-0.3
1,947,528	+				-1.9
1,947,528	+				+0.9
1,947,528	+				-0.7
1,947,528	+				+0.9
1,947,528	+				-0.5
1,947,528	+				+0.9
1,947,528	+				-0.1
1,947,528	+				-0.1
1,947,528	+				+0.1
1,947,528	+				-0.1
1,947,529	-				+1.9
1,947,529	-				-0.9
1,947,529	-				-0.7
1,947,529	-				-0.4
1,947,529	-				-0.7
1,947,529	-				-0.5
1,947,529	-				-1.0
1,947,529	-				+0.5
1,947,529	-				-0.1
1,947,529	-				+0.2
1,947,529	-				-1.4
1,947,786	+		LRK53_RS08675	0.16	-0.4
1,947,786	+		LRK53_RS08675	0.16	-1.1
1,947,786	+		LRK53_RS08675	0.16	-0.2
1,947,786	+		LRK53_RS08675	0.16	-1.1
1,947,786	+		LRK53_RS08675	0.16	-0.3
1,947,787	-		LRK53_RS08675	0.16	+0.2
1,947,787	-		LRK53_RS08675	0.16	-1.1
1,947,787	-		LRK53_RS08675	0.16	-0.2
1,947,787	-		LRK53_RS08675	0.16	-1.1