Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17695

Experiment: pH4.8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.8
3,877,479	+				-0.3
3,877,479	+				-2.1
3,877,479	+				+1.1
3,877,479	+				+0.2
3,877,479	+				-0.2
3,877,479	+				+0.4
3,877,483	+				+0.4
3,877,483	+				+0.4
3,877,483	+				-0.8
3,877,483	+				-1.2
3,877,483	+				-2.0
3,877,483	+				-0.0
3,877,483	+				+0.1
3,877,483	+				+0.3
3,877,483	+				-0.5
3,877,483	+				-1.0
3,877,483	+				+1.1
3,877,483	+				-1.8
3,877,483	+				-1.5
3,877,483	+				-0.2
3,877,483	+				-1.7
3,877,483	+				-0.8
3,877,483	+				-1.9
3,877,483	+				-1.2
3,877,579	+		LRK53_RS17690	0.18	-1.6
3,877,579	+		LRK53_RS17690	0.18	-1.1
3,877,579	+		LRK53_RS17690	0.18	+0.1
3,877,579	+		LRK53_RS17690	0.18	+2.1
3,877,579	+		LRK53_RS17690	0.18	+1.1
3,877,579	+		LRK53_RS17690	0.18	-0.7
3,877,579	+		LRK53_RS17690	0.18	-1.0
3,877,579	+		LRK53_RS17690	0.18	+2.1
3,877,579	+		LRK53_RS17690	0.18	-0.7
3,877,579	+		LRK53_RS17690	0.18	-0.5
3,877,579	+		LRK53_RS17690	0.18	-0.5
3,877,580	-		LRK53_RS17690	0.19	-0.3
3,877,580	-		LRK53_RS17690	0.19	-1.2
3,877,580	-		LRK53_RS17690	0.19	+0.1
3,877,580	-		LRK53_RS17690	0.19	-0.1
3,877,580	-		LRK53_RS17690	0.19	-0.9
3,877,580	-		LRK53_RS17690	0.19	+1.1
3,877,580	-		LRK53_RS17690	0.19	-1.5
3,877,580	-		LRK53_RS17690	0.19	-1.2
3,877,580	-		LRK53_RS17690	0.19	+1.1
3,877,580	-		LRK53_RS17690	0.19	-0.3
3,877,580	-		LRK53_RS17690	0.19	+1.1
3,877,589	+		LRK53_RS17690	0.21	-1.7
3,877,589	+		LRK53_RS17690	0.21	+0.1
3,877,589	+		LRK53_RS17690	0.21	-0.3
3,877,590	-		LRK53_RS17690	0.21	-0.6
3,877,590	-		LRK53_RS17690	0.21	-2.5
3,877,646	+		LRK53_RS17690	0.34	-0.8
3,877,646	+		LRK53_RS17690	0.34	+0.5
3,877,646	+		LRK53_RS17690	0.34	-0.2
3,877,646	+		LRK53_RS17690	0.34	-0.6
3,877,646	+		LRK53_RS17690	0.34	-0.6
3,877,647	-		LRK53_RS17690	0.34	+0.5
3,877,647	-		LRK53_RS17690	0.34	+0.5
3,877,647	-		LRK53_RS17690	0.34	+0.1
3,877,647	-		LRK53_RS17690	0.34	+0.5
3,877,647	-		LRK53_RS17690	0.34	-1.5
3,877,647	-		LRK53_RS17690	0.34	-0.7
3,877,647	-		LRK53_RS17690	0.34	-0.5
3,877,685	+		LRK53_RS17690	0.43	-0.6
3,877,685	+		LRK53_RS17690	0.43	-2.2
3,877,685	+		LRK53_RS17690	0.43	+0.4
3,877,685	+		LRK53_RS17690	0.43	-0.7
3,877,685	+		LRK53_RS17690	0.43	-1.1
3,877,685	+		LRK53_RS17690	0.43	-2.4
3,877,685	+		LRK53_RS17690	0.43	-0.9
3,877,685	+		LRK53_RS17690	0.43	-0.2
3,877,685	+		LRK53_RS17690	0.43	+0.1
3,877,685	+		LRK53_RS17690	0.43	+0.5
3,877,685	+		LRK53_RS17690	0.43	-0.9
3,877,685	+		LRK53_RS17690	0.43	-1.2
3,877,685	+		LRK53_RS17690	0.43	-0.7
3,877,685	+		LRK53_RS17690	0.43	-1.5
3,877,685	+		LRK53_RS17690	0.43	+1.1
3,877,685	+		LRK53_RS17690	0.43	+1.1
3,877,685	+		LRK53_RS17690	0.43	-1.0
3,877,685	+		LRK53_RS17690	0.43	-0.7
3,877,685	+		LRK53_RS17690	0.43	-0.5
3,877,685	+		LRK53_RS17690	0.43	-2.2
3,877,685	+		LRK53_RS17690	0.43	-0.5
3,877,685	+		LRK53_RS17690	0.43	-0.5
3,877,686	-		LRK53_RS17690	0.43	+1.1
3,877,686	-		LRK53_RS17690	0.43	+0.1
3,877,686	-		LRK53_RS17690	0.43	-0.1
3,877,686	-		LRK53_RS17690	0.43	-0.8
3,877,686	-		LRK53_RS17690	0.43	-1.0
3,877,686	-		LRK53_RS17690	0.43	-2.3
3,877,686	-		LRK53_RS17690	0.43	-0.5
3,877,686	-		LRK53_RS17690	0.43	+1.1
3,877,686	-		LRK53_RS17690	0.43	-0.9
3,877,686	-		LRK53_RS17690	0.43	-0.7
3,877,686	-		LRK53_RS17690	0.43	+1.1
3,877,686	-		LRK53_RS17690	0.43	-0.7
3,877,686	-		LRK53_RS17690	0.43	-1.1
3,877,686	-		LRK53_RS17690	0.43	+0.5
3,877,686	-		LRK53_RS17690	0.43	+0.7
3,877,686	-		LRK53_RS17690	0.43	-0.7
3,877,686	-		LRK53_RS17690	0.43	+0.2
3,877,686	-		LRK53_RS17690	0.43	-0.9
3,877,686	-		LRK53_RS17690	0.43	+0.4
3,877,686	-		LRK53_RS17690	0.43	+1.1
3,877,686	-		LRK53_RS17690	0.43	-0.2
3,877,686	-		LRK53_RS17690	0.43	+1.1
3,877,686	-		LRK53_RS17690	0.43	-1.7
3,877,686	-		LRK53_RS17690	0.43	-0.2
3,877,774	+		LRK53_RS17690	0.64	-0.8
3,877,774	+		LRK53_RS17690	0.64	-2.5
3,877,774	+		LRK53_RS17690	0.64	-1.2
3,877,774	+		LRK53_RS17690	0.64	-1.7
3,877,774	+		LRK53_RS17690	0.64	+0.1
3,877,774	+		LRK53_RS17690	0.64	-0.1
3,877,774	+		LRK53_RS17690	0.64	+1.1
3,877,878	-		LRK53_RS17690	0.88	+0.1
3,877,878	-		LRK53_RS17690	0.88	+2.1
3,877,878	-		LRK53_RS17690	0.88	-2.3
3,877,878	-		LRK53_RS17690	0.88	-0.6
3,877,907	-				-0.2
3,877,937	+				+1.1
3,877,937	+				+0.1
3,877,937	+				+0.1
3,877,937	+				-1.2
3,877,937	+				-0.5
3,877,937	+				+0.4
3,877,937	+				+0.1
3,877,937	+				+0.3
3,877,937	+				-1.7
3,877,937	+				-2.2
3,877,937	+				+0.1
3,877,937	+				+0.1
3,877,937	+				-1.0
3,877,937	+				+0.1
3,877,937	+				-1.2
3,877,937	+				-1.2
3,877,937	+				-0.6
3,877,938	-				-1.5
3,877,938	-				-0.8
3,877,938	-				-1.3
3,877,938	-				+0.1
3,877,938	-				-1.9
3,877,938	-				-1.5
3,877,938	-				-1.3
3,877,938	-				+1.1
3,877,938	-				-1.3
3,877,938	-				-2.2
3,877,938	-				-1.2
3,877,938	-				-1.2
3,877,941	+				-0.5
3,877,941	+				-0.7
3,877,941	+				+1.7
3,877,941	+				-1.6
3,877,941	+				+0.5
3,877,941	+				-1.9
3,877,941	+				+1.1
3,877,941	+				+1.4
3,877,941	+				-0.4
3,877,941	+				-1.7
3,877,941	+				-0.2
3,877,941	+				-1.7
3,877,941	+				-0.9
3,877,941	+				-1.5
3,877,941	+				+0.1
3,877,941	+				-0.1
3,877,941	+				-1.7
3,877,941	+				-1.0
3,877,941	+				-1.9
3,877,941	+				-1.0
3,877,941	+				-0.4
3,877,941	+				+0.1
3,877,941	+				+1.5
3,877,942	-				+0.1
3,877,942	-				-0.5
3,877,942	-				-1.1
3,877,942	-				-0.3
3,877,942	-				-1.9
3,877,942	-				-1.2
3,877,942	-				-1.5
3,877,942	-				-1.7
3,877,942	-				-0.9
3,877,942	-				-2.1
3,877,942	-				-0.4
3,877,942	-				+1.1
3,877,942	-				+0.5
3,877,942	-				+1.1
3,877,942	-				-0.8
3,877,942	-				-1.5
3,878,030	+				+0.1
3,878,030	+				-1.1
3,878,030	+				-1.7
3,878,030	+				-0.9
3,878,030	+				-0.3
3,878,030	+				-0.5
3,878,030	+				-0.7
3,878,030	+				-1.1
3,878,030	+				+0.0
3,878,030	+				-0.9
3,878,030	+				+0.1
3,878,030	+				-0.7
3,878,030	+				-1.2
3,878,030	+				-0.7
3,878,030	+				-0.7
3,878,030	+				+0.1
3,878,030	+				+1.7
3,878,031	-				-1.5
3,878,031	-				-1.1
3,878,031	-				+0.1
3,878,031	-				-1.2
3,878,031	-				+0.5
3,878,031	-				+0.4
3,878,031	-				-0.8
3,878,143	+				-1.0
3,878,143	+				+0.1
3,878,143	+				-3.2
3,878,143	+				-1.2
3,878,143	+				+1.1
3,878,143	+				-0.9
3,878,143	+				-3.0
3,878,143	+				+0.0
3,878,143	+				+1.1
3,878,143	+				+0.1
3,878,143	+				+0.5
3,878,143	+				-1.2
3,878,143	+				-1.3
3,878,143	+				-1.2
3,878,143	+				+1.1
3,878,143	+				-1.4
3,878,143	+				+0.4
3,878,143	+				-2.2
3,878,143	+				+0.7
3,878,143	+				-0.9
3,878,143	+				-0.3
3,878,143	+				+0.1
3,878,145	+				-1.6
3,878,145	+				-0.5
3,878,216	+				+0.5
3,878,217	-				+0.4
3,878,217	-				-1.0
3,878,217	-				+1.1
3,878,239	+				-0.9
3,878,261	+				-1.2
3,878,333	+				+0.1
3,878,333	+				+0.1
3,878,333	+				-0.7
3,878,334	-				-1.3
3,878,334	-				+0.1
3,878,334	-				-0.1
3,878,334	-				-0.3
3,878,334	-				-0.9
3,878,378	+		LRK53_RS17695	0.12	-1.2
3,878,378	+		LRK53_RS17695	0.12	+0.1
3,878,379	-		LRK53_RS17695	0.12	-0.5
3,878,379	-		LRK53_RS17695	0.12	-0.2
3,878,403	+		LRK53_RS17695	0.15	+0.7
3,878,403	+		LRK53_RS17695	0.15	-0.2
3,878,403	+		LRK53_RS17695	0.15	-0.2
3,878,403	+		LRK53_RS17695	0.15	-1.2
3,878,403	+		LRK53_RS17695	0.15	-1.7
3,878,403	+		LRK53_RS17695	0.15	+1.1
3,878,403	+		LRK53_RS17695	0.15	-2.2
3,878,403	+		LRK53_RS17695	0.15	-0.6
3,878,403	+		LRK53_RS17695	0.15	-1.3
3,878,403	+		LRK53_RS17695	0.15	+0.8
3,878,403	+		LRK53_RS17695	0.15	-0.0
3,878,403	+		LRK53_RS17695	0.15	-3.1
3,878,403	+		LRK53_RS17695	0.15	-0.5
3,878,403	+		LRK53_RS17695	0.15	-2.5
3,878,403	+		LRK53_RS17695	0.15	+0.4
3,878,403	+		LRK53_RS17695	0.15	-0.5
3,878,403	+		LRK53_RS17695	0.15	-0.9
3,878,403	+		LRK53_RS17695	0.15	-0.8
3,878,403	+		LRK53_RS17695	0.15	-1.2
3,878,404	-		LRK53_RS17695	0.15	+1.1
3,878,404	-		LRK53_RS17695	0.15	-1.2
3,878,404	-		LRK53_RS17695	0.15	+1.1
3,878,404	-		LRK53_RS17695	0.15	-2.2
3,878,404	-		LRK53_RS17695	0.15	-0.5
3,878,404	-		LRK53_RS17695	0.15	+1.1
3,878,404	-		LRK53_RS17695	0.15	-1.3
3,878,404	-		LRK53_RS17695	0.15	-1.0
3,878,404	-		LRK53_RS17695	0.15	+0.5
3,878,404	-		LRK53_RS17695	0.15	-0.5
3,878,404	-		LRK53_RS17695	0.15	+1.1
3,878,405	+		LRK53_RS17695	0.15	+0.5
3,878,405	+		LRK53_RS17695	0.15	+0.1
3,878,405	+		LRK53_RS17695	0.15	+1.1
3,878,405	+		LRK53_RS17695	0.15	-0.5
3,878,405	+		LRK53_RS17695	0.15	-1.2
3,878,405	+		LRK53_RS17695	0.15	-2.1
3,878,405	+		LRK53_RS17695	0.15	+0.1
3,878,405	+		LRK53_RS17695	0.15	-1.7
3,878,405	+		LRK53_RS17695	0.15	-1.5
3,878,405	+		LRK53_RS17695	0.15	-2.2
3,878,405	+		LRK53_RS17695	0.15	-0.9
3,878,405	+		LRK53_RS17695	0.15	-0.5
3,878,405	+		LRK53_RS17695	0.15	+1.1
3,878,406	-		LRK53_RS17695	0.15	-1.5
3,878,406	-		LRK53_RS17695	0.15	+1.1
3,878,406	-		LRK53_RS17695	0.15	-1.2
3,878,406	-		LRK53_RS17695	0.15	-0.2
3,878,406	-		LRK53_RS17695	0.15	-0.1
3,878,406	-		LRK53_RS17695	0.15	-2.1
3,878,406	-		LRK53_RS17695	0.15	+0.1
3,878,406	-		LRK53_RS17695	0.15	-0.5
3,878,406	-		LRK53_RS17695	0.15	-0.5
3,878,406	-		LRK53_RS17695	0.15	-0.5
3,878,406	-		LRK53_RS17695	0.15	-0.9
3,878,406	-		LRK53_RS17695	0.15	-0.9
3,878,459	-		LRK53_RS17695	0.20	-0.5
3,878,459	-		LRK53_RS17695	0.20	-0.9
3,878,474	+		LRK53_RS17695	0.22	-0.5
3,878,474	+		LRK53_RS17695	0.22	+0.5
3,878,474	+		LRK53_RS17695	0.22	+0.0
3,878,475	-		LRK53_RS17695	0.22	-1.5
3,878,475	-		LRK53_RS17695	0.22	-1.2
3,878,475	-		LRK53_RS17695	0.22	+0.5
3,878,475	-		LRK53_RS17695	0.22	+1.1
3,878,509	-		LRK53_RS17695	0.25	-0.9
3,879,152	+				-1.4
3,879,152	+				+1.7
3,879,153	-				-0.5
3,879,153	-				-0.2
3,879,160	+				-1.7
3,879,161	-				-0.8
3,879,214	+				-1.2
3,879,214	+				+0.4
3,879,261	+				-0.9
3,879,261	+				+0.3
3,879,261	+				-1.0
3,879,261	+				-1.2
3,879,261	+				+0.8
3,879,261	+				-0.5
3,879,261	+				-1.7
3,879,262	-				+0.5
3,879,262	-				+0.1
3,879,262	-				-0.0
3,879,262	-				-2.1
3,879,316	+				+1.1
3,879,316	+				-0.2
3,879,316	+				-1.2
3,879,316	+				-0.9
3,879,316	+				+0.1
3,879,316	+				-0.9
3,879,316	+				-1.0
3,879,316	+				-0.6
3,879,316	+				-0.9
3,879,316	+				-1.2
3,879,316	+				-1.2
3,879,316	+				-1.4
3,879,316	+				-2.4
3,879,316	+				-1.0
3,879,316	+				-1.6
3,879,316	+				-0.2
3,879,317	-				-0.0
3,879,317	-				-0.5
3,879,317	-				-0.2
3,879,317	-				-1.2
3,879,317	-				-1.1
3,879,317	-				+0.4
3,879,317	-				+0.1
3,879,317	-				-0.9
3,879,317	-				-1.5
3,879,317	-				-1.2
3,879,317	-				-1.4
3,879,322	+				+1.1
3,879,322	+				-1.0
3,879,322	+				-0.2
3,879,322	+				-0.0
3,879,322	+				-0.9
3,879,322	+				-1.5
3,879,322	+				-1.5
3,879,323	-				-1.8
3,879,323	-				-0.9
3,879,323	-				-0.2
3,879,323	-				-1.1
3,879,376	+				-0.5
3,879,376	+				+1.1
3,879,376	+				+0.1
3,879,376	+				-1.5
3,879,376	+				-1.1
3,879,376	+				+0.7
3,879,376	+				-2.4
3,879,376	+				+0.1
3,879,376	+				-0.2
3,879,377	-				-0.9
3,879,377	-				+0.5
3,879,377	-				-0.5
3,879,377	-				-0.5
3,879,386	+				-0.7
3,879,386	+				+0.1
3,879,507	+		LRK53_RS17700	0.21	+0.1
3,879,507	+		LRK53_RS17700	0.21	-2.0
3,879,507	+		LRK53_RS17700	0.21	-1.7
3,879,507	+		LRK53_RS17700	0.21	+0.5
3,879,507	+		LRK53_RS17700	0.21	+1.1
3,879,507	+		LRK53_RS17700	0.21	-0.5
3,879,507	+		LRK53_RS17700	0.21	-0.7
3,879,507	+		LRK53_RS17700	0.21	-1.5
3,879,507	+		LRK53_RS17700	0.21	+1.5
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3,879,508	-		LRK53_RS17700	0.21	+0.8
3,879,508	-		LRK53_RS17700	0.21	-0.4
3,879,508	-		LRK53_RS17700	0.21	-0.5
3,879,508	-		LRK53_RS17700	0.21	-0.6
3,879,508	-		LRK53_RS17700	0.21	-0.7
3,879,508	-		LRK53_RS17700	0.21	-1.3
3,879,595	+		LRK53_RS17700	0.31	+1.1
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3,879,595	+		LRK53_RS17700	0.31	-0.5
3,879,595	+		LRK53_RS17700	0.31	-0.1
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3,879,596	-		LRK53_RS17700	0.31	+1.1
3,879,596	-		LRK53_RS17700	0.31	-1.3
3,879,596	-		LRK53_RS17700	0.31	+1.1
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3,879,608	+		LRK53_RS17700	0.32	-1.1
3,879,608	+		LRK53_RS17700	0.32	-0.5
3,879,608	+		LRK53_RS17700	0.32	+0.1
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3,879,608	+		LRK53_RS17700	0.32	-1.2
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3,879,609	-		LRK53_RS17700	0.33	-0.6
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3,879,633	+		LRK53_RS17700	0.35	-2.2
3,879,633	+		LRK53_RS17700	0.35	-1.1
3,879,633	+		LRK53_RS17700	0.35	-1.2
3,879,633	+		LRK53_RS17700	0.35	-1.1
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3,879,684	+		LRK53_RS17700	0.41	+1.1
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3,879,685	-		LRK53_RS17700	0.41	+0.1
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3,879,685	-		LRK53_RS17700	0.41	-1.2
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3,879,685	-		LRK53_RS17700	0.41	-1.4
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3,879,876	+		LRK53_RS17700	0.63	-1.2
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3,879,882	+		LRK53_RS17700	0.63	-0.5
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3,879,882	+		LRK53_RS17700	0.63	+0.1
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3,879,883	-		LRK53_RS17700	0.64	-2.9
3,879,883	-		LRK53_RS17700	0.64	+1.1
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3,879,883	-		LRK53_RS17700	0.64	-1.1
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3,879,883	-		LRK53_RS17700	0.64	-1.1
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3,880,015	-		LRK53_RS17700	0.78	+2.1
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3,880,079	+		LRK53_RS17700	0.86	+1.1
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3,880,079	+		LRK53_RS17700	0.86	+0.1
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3,880,080	-		LRK53_RS17700	0.86	+1.1
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3,880,096	+		LRK53_RS17700	0.88	-1.2
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3,880,164	+				-0.3
3,880,164	+				-0.9
3,880,164	+				-1.5
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3,880,164	+				-0.8
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3,880,165	-				-1.0
3,880,165	-				-0.5
3,880,165	-				-0.9
3,880,165	-				+0.1
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3,880,165	-				-1.5
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3,880,197	-				-1.1
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3,880,214	+				-1.4