Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05565

Experiment: pH4.8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.8
1,298,087	-		LRK53_RS05560	0.45	-0.1
1,298,147	-		LRK53_RS05560	0.50	+0.6
1,298,568	+		LRK53_RS05560	0.83	+0.9
1,298,568	+		LRK53_RS05560	0.83	-1.4
1,298,569	-		LRK53_RS05560	0.83	-0.7
1,298,569	-		LRK53_RS05560	0.83	-0.1
1,298,569	-		LRK53_RS05560	0.83	-0.1
1,298,569	-		LRK53_RS05560	0.83	-0.7
1,298,569	-		LRK53_RS05560	0.83	-0.1
1,298,569	-		LRK53_RS05560	0.83	-0.3
1,298,569	-		LRK53_RS05560	0.83	-0.8
1,298,656	+		LRK53_RS05560	0.90	-1.4
1,298,656	+		LRK53_RS05560	0.90	-0.6
1,298,679	-				+0.9
1,298,807	+				-1.1
1,298,807	+				-0.2
1,298,807	+				+0.9
1,298,807	+				-2.1
1,298,807	+				+0.5
1,298,807	+				-0.5
1,298,807	+				+0.5
1,298,807	+				-1.2
1,298,807	+				-0.6
1,298,807	+				+1.3
1,298,807	+				-1.4
1,298,807	+				+0.6
1,298,807	+				-0.5
1,298,807	+				-2.6
1,298,807	+				-1.3
1,298,807	+				+0.9
1,298,807	+				-0.3
1,298,808	-				-1.6
1,298,808	-				-1.1
1,298,808	-				-0.4
1,298,808	-				-0.7
1,298,808	-				-0.6
1,298,808	-				+0.2
1,298,808	-				-0.8
1,298,808	-				-1.8
1,298,808	-				-2.3
1,298,808	-				-0.1
1,298,808	-				-1.1
1,298,808	-				+0.9
1,298,808	-				-1.4
1,298,808	-				-1.6
1,298,808	-				+0.9
1,298,808	-				-0.6
1,298,808	-				-0.6
1,298,808	-				+0.9
1,298,808	-				-0.8
1,298,910	+				-0.3
1,298,910	+				+0.4
1,298,910	+				-1.4
1,298,910	+				-3.0
1,298,910	+				-0.1
1,298,910	+				-0.6
1,298,911	-				-1.3
1,298,927	+				-1.2
1,298,928	-				-2.2
1,298,928	-				-1.6
1,298,971	+				-2.2
1,298,971	+				-1.8
1,298,971	+				-0.4
1,298,971	+				-1.5
1,298,971	+				-0.1
1,298,971	+				-0.3
1,298,972	-				-1.3
1,298,972	-				-2.1
1,298,972	-				-1.3
1,298,972	-				-2.5
1,298,972	-				-0.1
1,298,972	-				-0.3
1,298,972	-				-2.1
1,299,174	-		LRK53_RS05565	0.34	+0.9
1,299,245	+		LRK53_RS05565	0.56	-0.1
1,299,245	+		LRK53_RS05565	0.56	+0.9
1,299,246	-		LRK53_RS05565	0.56	-1.1
1,299,246	-		LRK53_RS05565	0.56	-0.1
1,299,401	+				-0.1
1,299,402	-				+0.9
1,299,406	-				+0.1
1,299,406	-				+0.4
1,299,406	-				-1.6
1,299,406	-				+0.9
1,299,406	-				-1.2
1,299,406	-				-0.6
1,299,406	-				+0.9
1,299,406	-				-1.8
1,299,411	+				-1.1
1,299,412	-				-2.2
1,299,414	+				-1.4
1,299,415	-				-0.4
1,299,511	+				-3.1
1,299,511	+				-1.9
1,299,511	+				-1.1
1,299,512	-				-1.2
1,299,512	-				-0.4
1,299,537	+				-1.8
1,299,548	+				-1.1
1,299,548	+				-1.6
1,299,580	+				+1.9
1,299,609	+				-1.5
1,299,609	+				-1.3
1,299,612	-				-1.6
1,299,612	-				+0.3