Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16415

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
3,614,864	+		LRK53_RS16410	0.66	+1.0
3,614,864	+		LRK53_RS16410	0.66	-1.0
3,614,864	+		LRK53_RS16410	0.66	-1.0
3,614,865	-		LRK53_RS16410	0.66	-1.2
3,614,865	-		LRK53_RS16410	0.66	-1.0
3,615,020	+		LRK53_RS16410	0.72	+0.5
3,615,020	+		LRK53_RS16410	0.72	-1.2
3,615,020	+		LRK53_RS16410	0.72	-1.4
3,615,021	-		LRK53_RS16410	0.72	+0.0
3,615,021	-		LRK53_RS16410	0.72	-2.0
3,615,021	-		LRK53_RS16410	0.72	-2.0
3,615,021	-		LRK53_RS16410	0.72	-0.5
3,615,021	-		LRK53_RS16410	0.72	-1.5
3,615,131	+		LRK53_RS16410	0.77	-2.4
3,615,131	+		LRK53_RS16410	0.77	+1.0
3,615,132	-		LRK53_RS16410	0.77	-0.8
3,615,132	-		LRK53_RS16410	0.77	+0.6
3,615,132	-		LRK53_RS16410	0.77	-1.0
3,615,132	-		LRK53_RS16410	0.77	-2.0
3,615,149	+		LRK53_RS16410	0.78	-0.8
3,615,149	+		LRK53_RS16410	0.78	-1.4
3,615,150	-		LRK53_RS16410	0.78	+0.6
3,615,150	-		LRK53_RS16410	0.78	-0.8
3,615,163	+		LRK53_RS16410	0.78	+1.0
3,615,163	+		LRK53_RS16410	0.78	+0.0
3,615,163	+		LRK53_RS16410	0.78	-1.4
3,615,163	+		LRK53_RS16410	0.78	+1.0
3,615,163	+		LRK53_RS16410	0.78	+0.5
3,615,164	-		LRK53_RS16410	0.78	+1.8
3,615,164	-		LRK53_RS16410	0.78	+0.0
3,615,164	-		LRK53_RS16410	0.78	-0.5
3,615,194	+		LRK53_RS16410	0.80	-0.8
3,615,194	+		LRK53_RS16410	0.80	-0.5
3,615,194	+		LRK53_RS16410	0.80	+0.2
3,615,194	+		LRK53_RS16410	0.80	-0.5
3,615,194	+		LRK53_RS16410	0.80	-0.3
3,615,194	+		LRK53_RS16410	0.80	-0.5
3,615,194	+		LRK53_RS16410	0.80	-0.8
3,615,194	+		LRK53_RS16410	0.80	+0.0
3,615,195	-		LRK53_RS16410	0.80	+1.0
3,615,195	-		LRK53_RS16410	0.80	-1.0
3,615,195	-		LRK53_RS16410	0.80	+0.7
3,615,195	-		LRK53_RS16410	0.80	-0.3
3,615,195	-		LRK53_RS16410	0.80	-0.5
3,615,195	-		LRK53_RS16410	0.80	-0.8
3,615,195	-		LRK53_RS16410	0.80	+1.4
3,615,195	-		LRK53_RS16410	0.80	-1.2
3,615,203	+		LRK53_RS16410	0.80	+1.0
3,615,203	+		LRK53_RS16410	0.80	-1.5
3,615,203	+		LRK53_RS16410	0.80	-0.5
3,615,203	+		LRK53_RS16410	0.80	+1.0
3,615,203	+		LRK53_RS16410	0.80	+0.1
3,615,203	+		LRK53_RS16410	0.80	-0.5
3,615,203	+		LRK53_RS16410	0.80	-1.2
3,615,203	+		LRK53_RS16410	0.80	-0.5
3,615,204	-		LRK53_RS16410	0.80	+0.0
3,615,204	-		LRK53_RS16410	0.80	-1.0
3,615,204	-		LRK53_RS16410	0.80	-0.8
3,615,204	-		LRK53_RS16410	0.80	-1.1
3,615,204	-		LRK53_RS16410	0.80	-0.1
3,615,204	-		LRK53_RS16410	0.80	-2.5
3,615,204	-		LRK53_RS16410	0.80	+0.6
3,615,204	-		LRK53_RS16410	0.80	-0.3
3,615,204	-		LRK53_RS16410	0.80	-0.5
3,615,204	-		LRK53_RS16410	0.80	-0.8
3,615,319	-		LRK53_RS16410	0.85	-1.5
3,615,494	+				+0.0
3,615,495	-				+0.0
3,615,504	-				-0.4
3,615,505	+				+0.3
3,615,506	-				+0.0
3,615,506	-				-0.7
3,615,515	+				-0.5
3,615,594	+				-0.5
3,615,616	+				-0.4
3,615,617	-				-0.5
3,615,656	-				+0.6
3,615,709	+				-1.5
3,615,726	+				-0.5
3,615,727	-				-1.2
3,615,735	+				+0.0
3,615,787	+		LRK53_RS16415	0.11	+0.7
3,615,787	+		LRK53_RS16415	0.11	-0.4
3,615,787	+		LRK53_RS16415	0.11	-0.4
3,615,787	+		LRK53_RS16415	0.11	-1.5
3,615,787	+		LRK53_RS16415	0.11	-1.8
3,615,788	-		LRK53_RS16415	0.11	-1.3
3,615,788	-		LRK53_RS16415	0.11	+0.0
3,615,788	-		LRK53_RS16415	0.11	-0.3
3,615,788	-		LRK53_RS16415	0.11	+1.0
3,615,788	-		LRK53_RS16415	0.11	+0.0
3,615,788	-		LRK53_RS16415	0.11	+2.0
3,615,788	-		LRK53_RS16415	0.11	-0.3
3,615,790	+		LRK53_RS16415	0.11	+0.5
3,615,791	-		LRK53_RS16415	0.11	-0.5
3,615,791	-		LRK53_RS16415	0.11	-0.5
3,615,910	+		LRK53_RS16415	0.24	-1.3
3,615,910	+		LRK53_RS16415	0.24	-1.8
3,615,911	-		LRK53_RS16415	0.24	-0.7
3,615,911	-		LRK53_RS16415	0.24	-0.6
3,615,911	-		LRK53_RS16415	0.24	-1.1
3,615,911	-		LRK53_RS16415	0.24	+1.0
3,615,973	+		LRK53_RS16415	0.30	-0.2
3,615,973	+		LRK53_RS16415	0.30	+1.0
3,615,974	-		LRK53_RS16415	0.30	-0.7
3,615,977	+		LRK53_RS16415	0.30	-1.0
3,615,977	+		LRK53_RS16415	0.30	-1.0
3,615,977	+		LRK53_RS16415	0.30	-1.0
3,615,977	+		LRK53_RS16415	0.30	+0.0
3,615,977	+		LRK53_RS16415	0.30	+0.2
3,615,977	+		LRK53_RS16415	0.30	-0.5
3,615,977	+		LRK53_RS16415	0.30	+0.0
3,615,977	+		LRK53_RS16415	0.30	-0.7
3,615,977	+		LRK53_RS16415	0.30	-0.2
3,615,977	+		LRK53_RS16415	0.30	-0.5
3,615,977	+		LRK53_RS16415	0.30	-3.1
3,615,977	+		LRK53_RS16415	0.30	+0.0
3,615,977	+		LRK53_RS16415	0.30	-1.3
3,615,977	+		LRK53_RS16415	0.30	-1.0
3,615,977	+		LRK53_RS16415	0.30	+0.6
3,615,977	+		LRK53_RS16415	0.30	+1.5
3,615,977	+		LRK53_RS16415	0.30	-0.1
3,615,977	+		LRK53_RS16415	0.30	-1.1
3,615,978	-		LRK53_RS16415	0.30	-1.2
3,615,978	-		LRK53_RS16415	0.30	-1.1
3,615,978	-		LRK53_RS16415	0.30	-1.6
3,615,978	-		LRK53_RS16415	0.30	-1.5
3,615,978	-		LRK53_RS16415	0.30	-0.3
3,615,978	-		LRK53_RS16415	0.30	+1.0
3,615,978	-		LRK53_RS16415	0.30	-1.3
3,615,978	-		LRK53_RS16415	0.30	-0.5
3,615,978	-		LRK53_RS16415	0.30	+0.0
3,615,978	-		LRK53_RS16415	0.30	-2.0
3,615,978	-		LRK53_RS16415	0.30	-1.3
3,615,978	-		LRK53_RS16415	0.30	-1.8
3,615,978	-		LRK53_RS16415	0.30	+0.5
3,615,978	-		LRK53_RS16415	0.30	-1.3
3,615,978	-		LRK53_RS16415	0.30	-1.0
3,615,978	-		LRK53_RS16415	0.30	+2.0
3,615,978	-		LRK53_RS16415	0.30	-0.6
3,615,978	-		LRK53_RS16415	0.30	+0.5
3,616,271	+		LRK53_RS16415	0.60	-0.8
3,616,271	+		LRK53_RS16415	0.60	-1.3
3,616,299	+		LRK53_RS16415	0.63	-0.4
3,616,299	+		LRK53_RS16415	0.63	+0.5
3,616,299	+		LRK53_RS16415	0.63	-0.8
3,616,300	-		LRK53_RS16415	0.63	+0.4
3,616,493	-		LRK53_RS16415	0.83	+0.0
3,616,519	-		LRK53_RS16415	0.85	-0.4
3,616,710	+				-0.6
3,616,710	+				-1.0
3,616,710	+				+0.5
3,616,710	+				-0.5
3,616,710	+				+0.0
3,616,710	+				+0.5
3,616,710	+				-0.5
3,616,710	+				-0.8
3,616,710	+				-0.6
3,616,710	+				-0.9
3,616,710	+				-0.4
3,616,710	+				-1.1
3,616,710	+				-1.8
3,616,710	+				-0.5
3,616,710	+				+0.5
3,616,710	+				-1.0
3,616,710	+				-0.3
3,616,711	-				-0.7
3,616,711	-				-1.3
3,616,711	-				-2.1
3,616,711	-				+0.5
3,616,711	-				-0.5
3,616,711	-				+0.7
3,616,711	-				-0.5
3,616,711	-				+3.0
3,616,711	-				-1.4
3,616,711	-				-1.0
3,616,711	-				-1.3
3,616,711	-				+0.9
3,616,711	-				-1.2
3,616,711	-				-0.8
3,616,711	-				+0.0
3,616,711	-				-1.5
3,616,907	+		LRK53_RS16420	0.27	+0.5
3,616,907	+		LRK53_RS16420	0.27	-2.0
3,616,907	+		LRK53_RS16420	0.27	-1.5
3,616,907	+		LRK53_RS16420	0.27	+0.0
3,616,908	-		LRK53_RS16420	0.27	-2.4
3,616,908	-		LRK53_RS16420	0.27	+1.0
3,616,908	-		LRK53_RS16420	0.27	-0.5
3,616,908	-		LRK53_RS16420	0.27	+0.9
3,616,908	-		LRK53_RS16420	0.27	-1.8
3,616,908	-		LRK53_RS16420	0.27	-0.9
3,616,908	-		LRK53_RS16420	0.27	-0.1
3,616,908	-		LRK53_RS16420	0.27	-1.3
3,616,931	+		LRK53_RS16420	0.29	+0.0
3,616,931	+		LRK53_RS16420	0.29	-0.5
3,616,931	+		LRK53_RS16420	0.29	-1.8
3,616,931	+		LRK53_RS16420	0.29	-2.4
3,616,931	+		LRK53_RS16420	0.29	+0.5
3,616,931	+		LRK53_RS16420	0.29	+0.5
3,616,931	+		LRK53_RS16420	0.29	+1.0
3,616,931	+		LRK53_RS16420	0.29	-0.5
3,616,932	-		LRK53_RS16420	0.29	+0.0
3,616,932	-		LRK53_RS16420	0.29	-0.3
3,616,932	-		LRK53_RS16420	0.29	-0.5
3,616,932	-		LRK53_RS16420	0.29	-2.2
3,616,932	-		LRK53_RS16420	0.29	-0.8
3,616,932	-		LRK53_RS16420	0.29	-1.8
3,616,932	-		LRK53_RS16420	0.29	+0.4
3,616,932	-		LRK53_RS16420	0.29	+1.3
3,616,932	-		LRK53_RS16420	0.29	+1.0
3,616,932	-		LRK53_RS16420	0.29	+0.5
3,616,932	-		LRK53_RS16420	0.29	+0.0
3,616,932	-		LRK53_RS16420	0.29	+1.0
3,616,932	-		LRK53_RS16420	0.29	-1.3
3,616,932	-		LRK53_RS16420	0.29	-0.5
3,616,932	-		LRK53_RS16420	0.29	+2.0
3,616,932	-		LRK53_RS16420	0.29	-0.8
3,616,993	-		LRK53_RS16420	0.36	-1.0
3,617,048	+		LRK53_RS16420	0.42	+2.0
3,617,048	+		LRK53_RS16420	0.42	+1.0
3,617,048	+		LRK53_RS16420	0.42	-0.5
3,617,048	+		LRK53_RS16420	0.42	-0.5
3,617,048	+		LRK53_RS16420	0.42	+0.0
3,617,048	+		LRK53_RS16420	0.42	-2.0
3,617,048	+		LRK53_RS16420	0.42	+0.5
3,617,048	+		LRK53_RS16420	0.42	-0.6
3,617,048	+		LRK53_RS16420	0.42	-0.7
3,617,048	+		LRK53_RS16420	0.42	-1.3
3,617,048	+		LRK53_RS16420	0.42	-1.3
3,617,048	+		LRK53_RS16420	0.42	-1.4
3,617,048	+		LRK53_RS16420	0.42	+0.8
3,617,048	+		LRK53_RS16420	0.42	-1.4
3,617,048	+		LRK53_RS16420	0.42	-0.5
3,617,048	+		LRK53_RS16420	0.42	+0.6
3,617,048	+		LRK53_RS16420	0.42	+0.0
3,617,048	+		LRK53_RS16420	0.42	-1.3
3,617,048	+		LRK53_RS16420	0.42	+1.0
3,617,048	+		LRK53_RS16420	0.42	+1.6
3,617,048	+		LRK53_RS16420	0.42	-0.3
3,617,048	+		LRK53_RS16420	0.42	-0.4
3,617,048	+		LRK53_RS16420	0.42	-0.5
3,617,049	-		LRK53_RS16420	0.42	-1.3
3,617,049	-		LRK53_RS16420	0.42	-1.0
3,617,049	-		LRK53_RS16420	0.42	+0.0
3,617,049	-		LRK53_RS16420	0.42	-1.0
3,617,049	-		LRK53_RS16420	0.42	-1.1
3,617,049	-		LRK53_RS16420	0.42	+0.0
3,617,049	-		LRK53_RS16420	0.42	-1.1
3,617,049	-		LRK53_RS16420	0.42	+0.3
3,617,049	-		LRK53_RS16420	0.42	-0.7
3,617,049	-		LRK53_RS16420	0.42	-0.6
3,617,049	-		LRK53_RS16420	0.42	-1.0
3,617,049	-		LRK53_RS16420	0.42	-1.8
3,617,049	-		LRK53_RS16420	0.42	-0.8
3,617,049	-		LRK53_RS16420	0.42	-1.0
3,617,049	-		LRK53_RS16420	0.42	-0.4
3,617,049	-		LRK53_RS16420	0.42	-0.3
3,617,049	-		LRK53_RS16420	0.42	+0.3
3,617,049	-		LRK53_RS16420	0.42	-1.0
3,617,151	+		LRK53_RS16420	0.53	-1.0
3,617,151	+		LRK53_RS16420	0.53	+0.0
3,617,166	+		LRK53_RS16420	0.55	-1.1
3,617,166	+		LRK53_RS16420	0.55	-1.5
3,617,166	+		LRK53_RS16420	0.55	-0.5
3,617,166	+		LRK53_RS16420	0.55	-0.3
3,617,166	+		LRK53_RS16420	0.55	+0.3
3,617,167	-		LRK53_RS16420	0.55	-0.9
3,617,276	-		LRK53_RS16420	0.67	-1.0
3,617,299	+		LRK53_RS16420	0.69	-1.5
3,617,300	-		LRK53_RS16420	0.69	-0.3
3,617,300	-		LRK53_RS16420	0.69	+0.5
3,617,300	-		LRK53_RS16420	0.69	-0.5
3,617,300	-		LRK53_RS16420	0.69	+0.6
3,617,300	-		LRK53_RS16420	0.69	-1.3
3,617,300	-		LRK53_RS16420	0.69	-1.8
3,617,300	-		LRK53_RS16420	0.69	-1.8
3,617,328	+		LRK53_RS16420	0.72	-0.3
3,617,329	-		LRK53_RS16420	0.72	-0.4
3,617,358	+		LRK53_RS16420	0.75	-0.3