Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15090

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
3,295,442	-		LRK53_RS15080	0.86	+0.0
3,295,507	+		LRK53_RS15080	0.90	+0.3
3,295,508	-		LRK53_RS15080	0.90	-0.6
3,295,519	+				+2.0
3,295,519	+				+0.0
3,295,519	+				-0.3
3,295,519	+				-0.6
3,295,519	+				-2.3
3,295,520	-				-0.2
3,295,520	-				-0.7
3,295,520	-				+2.6
3,295,520	-				-0.2
3,295,646	+				-3.1
3,295,761	+				-1.6
3,295,761	+				-0.6
3,295,761	+				-0.6
3,295,762	-				-0.6
3,295,762	-				-0.4
3,295,762	-				+2.0
3,295,762	-				+0.0
3,296,000	+		LRK53_RS15085	0.82	-0.7
3,296,000	+		LRK53_RS15085	0.82	+2.0
3,296,000	+		LRK53_RS15085	0.82	-1.2
3,296,000	+		LRK53_RS15085	0.82	-0.3
3,296,000	+		LRK53_RS15085	0.82	-0.6
3,296,001	-		LRK53_RS15085	0.82	-1.0
3,296,001	-		LRK53_RS15085	0.82	+0.0
3,296,001	-		LRK53_RS15085	0.82	+0.4
3,296,001	-		LRK53_RS15085	0.82	+0.0
3,296,001	-		LRK53_RS15085	0.82	-2.1
3,296,001	-		LRK53_RS15085	0.82	+0.0
3,296,001	-		LRK53_RS15085	0.82	+0.6
3,296,001	-		LRK53_RS15085	0.82	-0.4
3,296,001	-		LRK53_RS15085	0.82	-1.3
3,296,001	-		LRK53_RS15085	0.82	-1.3
3,296,204	+				-0.7
3,296,204	+				+0.0
3,296,204	+				+0.3
3,296,204	+				-1.3
3,296,205	-				+0.4
3,296,269	+				-0.6
3,296,269	+				+0.0
3,296,269	+				+0.6
3,296,269	+				-0.3
3,296,269	+				-1.6
3,296,269	+				+0.0
3,296,270	-				-0.5
3,296,270	-				-1.1
3,296,539	+		LRK53_RS15090	0.21	+0.0
3,296,539	+		LRK53_RS15090	0.21	-0.6
3,296,539	+		LRK53_RS15090	0.21	+0.0
3,296,795	-		LRK53_RS15090	0.39	-1.0
3,296,908	+		LRK53_RS15090	0.47	-1.0
3,296,909	-		LRK53_RS15090	0.47	-2.0
3,296,909	-		LRK53_RS15090	0.47	+0.7
3,296,909	-		LRK53_RS15090	0.47	-0.1
3,297,310	+		LRK53_RS15090	0.75	+0.0
3,297,310	+		LRK53_RS15090	0.75	-0.6
3,297,310	+		LRK53_RS15090	0.75	-0.5
3,297,310	+		LRK53_RS15090	0.75	-1.0
3,297,310	+		LRK53_RS15090	0.75	-1.0
3,297,310	+		LRK53_RS15090	0.75	-2.0
3,297,310	+		LRK53_RS15090	0.75	+0.4
3,297,310	+		LRK53_RS15090	0.75	+0.7
3,297,310	+		LRK53_RS15090	0.75	-0.6
3,297,310	+		LRK53_RS15090	0.75	+1.0
3,297,310	+		LRK53_RS15090	0.75	+0.0
3,297,310	+		LRK53_RS15090	0.75	-0.6
3,297,311	-		LRK53_RS15090	0.75	-1.0
3,297,311	-		LRK53_RS15090	0.75	-2.1
3,297,311	-		LRK53_RS15090	0.75	-0.6
3,297,311	-		LRK53_RS15090	0.75	-1.6
3,297,311	-		LRK53_RS15090	0.75	-1.3
3,297,311	-		LRK53_RS15090	0.75	-2.0
3,297,311	-		LRK53_RS15090	0.75	+1.0
3,297,311	-		LRK53_RS15090	0.75	-0.6
3,297,311	-		LRK53_RS15090	0.75	-0.7
3,297,311	-		LRK53_RS15090	0.75	+0.6
3,297,311	-		LRK53_RS15090	0.75	-1.7
3,297,311	-		LRK53_RS15090	0.75	-1.7
3,297,311	-		LRK53_RS15090	0.75	-1.6
3,297,311	-		LRK53_RS15090	0.75	+0.6
3,297,679	+				-1.4
3,297,679	+				-1.0
3,297,679	+				-0.6
3,297,680	-				-1.0
3,297,776	+				-1.2
3,297,776	+				-1.3
3,297,776	+				-0.6
3,297,776	+				-0.6
3,297,776	+				+0.4
3,297,777	-				-0.6
3,297,777	-				+0.0
3,297,807	+				+0.6
3,297,808	-				-1.0
3,297,808	-				+0.0
3,297,872	-				+2.0
3,297,991	+				-1.1
3,297,991	+				-1.0
3,297,991	+				-0.9
3,297,991	+				-2.2
3,297,991	+				-1.0
3,297,991	+				-0.7
3,297,991	+				-0.3
3,297,991	+				+0.4
3,297,991	+				-1.2
3,297,991	+				+1.4
3,297,991	+				-0.4
3,297,991	+				-1.0
3,297,991	+				-1.0
3,297,991	+				+1.0
3,297,992	-				+1.0
3,297,992	-				-0.6
3,297,992	-				+1.6
3,297,992	-				-1.2
3,297,992	-				-1.0
3,297,992	-				-1.0
3,297,992	-				-0.7
3,297,992	-				-1.6
3,297,992	-				-1.0
3,297,992	-				-1.1
3,297,992	-				-1.6
3,297,992	-				+0.0
3,298,018	-				-0.3
3,298,585	+				-0.5
3,298,585	+				+0.4