Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08115

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
1,821,910	+		LRK53_RS08110	0.42	+0.7
1,821,910	+		LRK53_RS08110	0.42	-0.3
1,821,925	-		LRK53_RS08110	0.43	-0.6
1,822,066	+		LRK53_RS08110	0.51	-2.2
1,822,066	+		LRK53_RS08110	0.51	+1.0
1,822,066	+		LRK53_RS08110	0.51	-0.9
1,822,066	+		LRK53_RS08110	0.51	-1.6
1,822,066	+		LRK53_RS08110	0.51	+1.0
1,822,259	-		LRK53_RS08110	0.62	-0.0
1,822,259	-		LRK53_RS08110	0.62	-0.9
1,822,375	+		LRK53_RS08110	0.69	-0.3
1,822,376	+		LRK53_RS08110	0.69	-1.3
1,822,376	+		LRK53_RS08110	0.69	-1.5
1,822,376	+		LRK53_RS08110	0.69	+0.4
1,822,376	+		LRK53_RS08110	0.69	-1.8
1,822,376	+		LRK53_RS08110	0.69	-1.6
1,822,376	+		LRK53_RS08110	0.69	-1.4
1,822,377	-		LRK53_RS08110	0.69	-0.8
1,822,377	-		LRK53_RS08110	0.69	+0.1
1,822,380	+		LRK53_RS08110	0.70	-0.8
1,822,380	+		LRK53_RS08110	0.70	-1.1
1,822,380	+		LRK53_RS08110	0.70	-1.0
1,822,380	+		LRK53_RS08110	0.70	+0.7
1,822,380	+		LRK53_RS08110	0.70	-0.8
1,822,380	+		LRK53_RS08110	0.70	-1.6
1,822,380	+		LRK53_RS08110	0.70	+0.4
1,822,380	+		LRK53_RS08110	0.70	-1.0
1,822,381	-		LRK53_RS08110	0.70	-1.1
1,822,381	-		LRK53_RS08110	0.70	-1.0
1,822,381	-		LRK53_RS08110	0.70	+1.0
1,822,381	-		LRK53_RS08110	0.70	-1.8
1,822,381	-		LRK53_RS08110	0.70	-1.2
1,822,381	-		LRK53_RS08110	0.70	+2.6
1,822,381	-		LRK53_RS08110	0.70	-1.4
1,822,381	-		LRK53_RS08110	0.70	-0.6
1,822,381	-		LRK53_RS08110	0.70	-1.0
1,822,381	-		LRK53_RS08110	0.70	+0.6
1,822,409	-		LRK53_RS08110	0.71	-1.3
1,822,409	-		LRK53_RS08110	0.71	-0.2
1,822,409	-		LRK53_RS08110	0.71	-0.3
1,822,409	-		LRK53_RS08110	0.71	-0.6
1,822,409	-		LRK53_RS08110	0.71	-0.6
1,822,409	-		LRK53_RS08110	0.71	-0.4
1,822,441	+		LRK53_RS08110	0.73	-0.4
1,822,441	+		LRK53_RS08110	0.73	-0.8
1,822,441	+		LRK53_RS08110	0.73	-1.5
1,822,441	+		LRK53_RS08110	0.73	+2.0
1,822,441	+		LRK53_RS08110	0.73	-0.6
1,822,442	-		LRK53_RS08110	0.73	-1.8
1,822,442	-		LRK53_RS08110	0.73	+1.0
1,822,442	-		LRK53_RS08110	0.73	+1.0
1,822,442	-		LRK53_RS08110	0.73	+0.7
1,822,442	-		LRK53_RS08110	0.73	-1.3
1,822,474	+		LRK53_RS08110	0.75	-1.0
1,822,474	+		LRK53_RS08110	0.75	-0.0
1,822,474	+		LRK53_RS08110	0.75	-0.3
1,822,474	+		LRK53_RS08110	0.75	+1.0
1,822,474	+		LRK53_RS08110	0.75	-1.3
1,822,474	+		LRK53_RS08110	0.75	-1.3
1,822,474	+		LRK53_RS08110	0.75	-2.2
1,822,474	+		LRK53_RS08110	0.75	+1.0
1,822,474	+		LRK53_RS08110	0.75	-0.0
1,822,475	-		LRK53_RS08110	0.75	+1.0
1,822,475	-		LRK53_RS08110	0.75	-1.6
1,822,475	-		LRK53_RS08110	0.75	-0.2
1,822,475	-		LRK53_RS08110	0.75	-2.0
1,822,475	-		LRK53_RS08110	0.75	+2.0
1,822,475	-		LRK53_RS08110	0.75	+0.6
1,822,475	-		LRK53_RS08110	0.75	-0.5
1,822,475	-		LRK53_RS08110	0.75	+1.0
1,822,475	-		LRK53_RS08110	0.75	+1.0
1,822,504	+		LRK53_RS08110	0.77	-0.6
1,822,504	+		LRK53_RS08110	0.77	-1.0
1,822,504	+		LRK53_RS08110	0.77	-1.2
1,822,504	+		LRK53_RS08110	0.77	+0.4
1,822,504	+		LRK53_RS08110	0.77	-1.0
1,822,504	+		LRK53_RS08110	0.77	+2.0
1,822,504	+		LRK53_RS08110	0.77	+0.4
1,822,504	+		LRK53_RS08110	0.77	-1.0
1,822,504	+		LRK53_RS08110	0.77	-0.0
1,822,504	+		LRK53_RS08110	0.77	-0.0
1,822,504	+		LRK53_RS08110	0.77	-1.5
1,822,504	+		LRK53_RS08110	0.77	-0.4
1,822,504	+		LRK53_RS08110	0.77	-1.4
1,822,504	+		LRK53_RS08110	0.77	-0.6
1,822,504	+		LRK53_RS08110	0.77	-0.6
1,822,504	+		LRK53_RS08110	0.77	-0.3
1,822,504	+		LRK53_RS08110	0.77	+1.0
1,822,504	+		LRK53_RS08110	0.77	+0.6
1,822,505	-		LRK53_RS08110	0.77	-1.3
1,822,505	-		LRK53_RS08110	0.77	-1.7
1,822,505	-		LRK53_RS08110	0.77	+1.0
1,822,505	-		LRK53_RS08110	0.77	-1.2
1,822,505	-		LRK53_RS08110	0.77	-1.2
1,822,505	-		LRK53_RS08110	0.77	-0.3
1,822,505	-		LRK53_RS08110	0.77	-1.0
1,822,505	-		LRK53_RS08110	0.77	+0.4
1,822,505	-		LRK53_RS08110	0.77	+1.0
1,822,505	-		LRK53_RS08110	0.77	-0.0
1,822,505	-		LRK53_RS08110	0.77	-1.0
1,822,505	-		LRK53_RS08110	0.77	-1.6
1,822,505	-		LRK53_RS08110	0.77	-1.2
1,822,505	-		LRK53_RS08110	0.77	+1.0
1,822,505	-		LRK53_RS08110	0.77	-0.4
1,822,505	-		LRK53_RS08110	0.77	-1.3
1,822,505	-		LRK53_RS08110	0.77	-0.0
1,822,505	-		LRK53_RS08110	0.77	-1.8
1,822,505	-		LRK53_RS08110	0.77	+1.0
1,822,505	-		LRK53_RS08110	0.77	-0.3
1,822,505	-		LRK53_RS08110	0.77	-0.3
1,822,505	-		LRK53_RS08110	0.77	-0.0
1,822,550	+		LRK53_RS08110	0.80	+2.0
1,822,564	-		LRK53_RS08110	0.80	+1.0
1,822,889	+				-0.0
1,822,889	+				-0.6
1,822,889	+				+1.0
1,822,968	+				-1.0
1,822,968	+				-0.7
1,822,968	+				-1.5
1,822,969	-				+2.0
1,822,983	+		LRK53_RS08115	0.10	-1.1
1,822,983	+		LRK53_RS08115	0.10	-0.6
1,822,983	+		LRK53_RS08115	0.10	-0.2
1,822,983	+		LRK53_RS08115	0.10	+0.2
1,822,983	+		LRK53_RS08115	0.10	-0.1
1,822,983	+		LRK53_RS08115	0.10	-0.3
1,822,983	+		LRK53_RS08115	0.10	-0.2
1,822,983	+		LRK53_RS08115	0.10	-1.1
1,822,983	+		LRK53_RS08115	0.10	-0.5
1,822,983	+		LRK53_RS08115	0.10	-1.2
1,822,983	+		LRK53_RS08115	0.10	-0.8
1,822,984	-		LRK53_RS08115	0.11	+1.0
1,822,984	-		LRK53_RS08115	0.11	+0.0
1,822,984	-		LRK53_RS08115	0.11	+1.0
1,822,984	-		LRK53_RS08115	0.11	-1.2
1,822,984	-		LRK53_RS08115	0.11	-1.3
1,822,984	-		LRK53_RS08115	0.11	-0.9
1,822,984	-		LRK53_RS08115	0.11	-1.2
1,822,984	-		LRK53_RS08115	0.11	+0.3
1,822,984	-		LRK53_RS08115	0.11	+1.0
1,822,984	-		LRK53_RS08115	0.11	-0.2
1,822,984	-		LRK53_RS08115	0.11	-0.3
1,822,984	-		LRK53_RS08115	0.11	-0.0
1,822,984	-		LRK53_RS08115	0.11	-1.7
1,823,136	+		LRK53_RS08115	0.32	-2.2
1,823,136	+		LRK53_RS08115	0.32	-1.3
1,823,136	+		LRK53_RS08115	0.32	-0.9
1,823,136	+		LRK53_RS08115	0.32	-0.4
1,823,136	+		LRK53_RS08115	0.32	-0.2
1,823,136	+		LRK53_RS08115	0.32	-0.8
1,823,136	+		LRK53_RS08115	0.32	-1.2
1,823,136	+		LRK53_RS08115	0.32	-1.0
1,823,136	+		LRK53_RS08115	0.32	+0.4
1,823,137	-		LRK53_RS08115	0.32	-1.0
1,823,137	-		LRK53_RS08115	0.32	+0.1
1,823,137	-		LRK53_RS08115	0.32	-0.7
1,823,137	-		LRK53_RS08115	0.32	-0.6
1,823,137	-		LRK53_RS08115	0.32	-0.3
1,823,137	-		LRK53_RS08115	0.32	-0.7
1,823,137	-		LRK53_RS08115	0.32	-0.3
1,823,137	-		LRK53_RS08115	0.32	-1.0
1,823,137	-		LRK53_RS08115	0.32	-0.3
1,823,157	+		LRK53_RS08115	0.34	-0.6
1,823,157	+		LRK53_RS08115	0.34	+0.0
1,823,157	+		LRK53_RS08115	0.34	-0.0
1,823,158	-		LRK53_RS08115	0.35	+2.0
1,823,158	-		LRK53_RS08115	0.35	-0.0
1,823,158	-		LRK53_RS08115	0.35	-0.9
1,823,158	-		LRK53_RS08115	0.35	-0.0
1,823,158	-		LRK53_RS08115	0.35	-1.6
1,823,158	-		LRK53_RS08115	0.35	+1.0
1,823,175	+		LRK53_RS08115	0.37	-0.0
1,823,175	+		LRK53_RS08115	0.37	-1.3
1,823,175	+		LRK53_RS08115	0.37	-1.0
1,823,175	+		LRK53_RS08115	0.37	+0.7
1,823,175	+		LRK53_RS08115	0.37	-0.9
1,823,176	-		LRK53_RS08115	0.37	-0.6
1,823,259	+		LRK53_RS08115	0.48	-0.2
1,823,259	+		LRK53_RS08115	0.48	+1.0
1,823,259	+		LRK53_RS08115	0.48	+0.4
1,823,259	+		LRK53_RS08115	0.48	+2.0
1,823,260	-		LRK53_RS08115	0.49	+1.0
1,823,260	-		LRK53_RS08115	0.49	-1.0
1,823,260	-		LRK53_RS08115	0.49	-0.8
1,823,333	+		LRK53_RS08115	0.59	-0.8
1,823,333	+		LRK53_RS08115	0.59	-1.6
1,823,333	+		LRK53_RS08115	0.59	-0.8
1,823,333	+		LRK53_RS08115	0.59	-1.4
1,823,333	+		LRK53_RS08115	0.59	-0.0
1,823,333	+		LRK53_RS08115	0.59	-0.1
1,823,333	+		LRK53_RS08115	0.59	+0.2
1,823,333	+		LRK53_RS08115	0.59	-1.0
1,823,333	+		LRK53_RS08115	0.59	-0.5
1,823,333	+		LRK53_RS08115	0.59	-0.7
1,823,333	+		LRK53_RS08115	0.59	-1.6
1,823,333	+		LRK53_RS08115	0.59	+1.0
1,823,333	+		LRK53_RS08115	0.59	+0.5
1,823,334	-		LRK53_RS08115	0.59	-0.6
1,823,334	-		LRK53_RS08115	0.59	-0.0
1,823,334	-		LRK53_RS08115	0.59	-0.1
1,823,334	-		LRK53_RS08115	0.59	-2.0
1,823,334	-		LRK53_RS08115	0.59	-1.1
1,823,334	-		LRK53_RS08115	0.59	-1.2
1,823,334	-		LRK53_RS08115	0.59	-1.1
1,823,334	-		LRK53_RS08115	0.59	-0.3
1,823,334	-		LRK53_RS08115	0.59	-0.8
1,823,334	-		LRK53_RS08115	0.59	-1.3
1,823,334	-		LRK53_RS08115	0.59	-1.0
1,823,344	+		LRK53_RS08115	0.60	-0.5
1,823,344	+		LRK53_RS08115	0.60	-0.6
1,823,344	+		LRK53_RS08115	0.60	-0.8
1,823,345	-		LRK53_RS08115	0.60	-0.0
1,823,543	+		LRK53_RS08115	0.88	-1.2
1,823,543	+		LRK53_RS08115	0.88	-0.5
1,823,543	+		LRK53_RS08115	0.88	-0.6
1,823,544	-		LRK53_RS08115	0.88	-0.2
1,823,544	-		LRK53_RS08115	0.88	-2.0
1,823,590	+				-1.0
1,823,610	+				+2.0
1,823,611	-				-0.0
1,823,611	-				-1.6
1,823,611	-				-0.3
1,823,652	+				+0.7
1,823,652	+				-0.2
1,823,652	+				+0.4
1,823,652	+				-0.6
1,823,653	-				-1.0
1,823,653	-				+0.2
1,823,653	-				-0.0
1,823,654	+				-0.8
1,823,654	+				+1.0
1,823,654	+				+2.0
1,823,654	+				+1.2
1,823,654	+				+1.0
1,823,654	+				-0.7
1,823,654	+				-0.3
1,823,654	+				+0.4
1,823,655	-				-0.4
1,823,655	-				+1.0
1,823,655	-				+1.0
1,823,655	-				+1.0
1,823,655	-				-0.0
1,823,655	-				-0.3
1,823,655	-				+1.0
1,823,655	-				-0.3
1,823,655	-				-2.1
1,823,731	+				-1.0
1,823,731	+				-0.6
1,823,731	+				-0.5
1,823,731	+				-0.0
1,823,731	+				-2.3
1,823,732	-				-1.2
1,823,732	-				+1.0
1,823,732	-				-1.5
1,823,732	-				-1.0
1,823,734	+				-0.0
1,823,734	+				-1.0
1,823,734	+				-0.6
1,823,734	+				-1.8
1,823,735	-				-1.5
1,823,735	-				-2.2
1,823,735	-				-0.3
1,823,735	-				-1.0
1,823,735	-				-1.3
1,823,735	-				-1.3
1,823,741	+				-1.6
1,823,741	+				-0.3
1,823,741	+				-0.9
1,823,741	+				-0.0
1,823,741	+				-0.0
1,823,741	+				-0.0
1,823,742	-				-1.0
1,823,742	-				-1.7
1,823,742	-				+0.1
1,823,742	-				-2.1
1,823,742	-				+0.4
1,823,742	-				-0.0
1,823,742	-				-0.6
1,823,742	-				-0.0
1,823,742	-				-1.0
1,823,742	-				-1.8
1,823,742	-				-0.8
1,823,742	-				-0.6
1,823,742	-				-1.9
1,823,743	+				+1.0
1,823,743	+				+1.4
1,823,743	+				-1.1
1,823,743	+				-1.1
1,823,743	+				+1.0
1,823,743	+				+1.6
1,823,744	-				+1.0
1,823,744	-				-1.8
1,823,744	-				-0.5
1,823,744	-				-1.1
1,823,744	-				-0.7
1,823,744	-				-0.3
1,823,744	-				+1.0
1,823,791	+				-0.6
1,823,791	+				-0.3
1,823,791	+				+1.0
1,823,792	-				-0.4
1,823,792	-				-0.2
1,823,792	-				-0.0
1,823,792	-				+1.0
1,823,792	-				+2.0
1,823,792	-				-2.2
1,823,792	-				+1.0
1,823,792	-				-0.0
1,823,792	-				-1.6
1,823,913	+		LRK53_RS08120	0.38	-1.3
1,823,914	-		LRK53_RS08120	0.38	-0.0
1,823,914	-		LRK53_RS08120	0.38	+1.0
1,823,914	-		LRK53_RS08120	0.38	-0.6
1,823,914	-		LRK53_RS08120	0.38	-1.3
1,823,914	-		LRK53_RS08120	0.38	-0.6
1,823,914	-		LRK53_RS08120	0.38	-1.5
1,823,914	-		LRK53_RS08120	0.38	-1.3
1,823,975	+		LRK53_RS08120	0.55	-1.0
1,823,975	+		LRK53_RS08120	0.55	-2.7
1,823,976	-		LRK53_RS08120	0.55	-2.3
1,824,001	+		LRK53_RS08120	0.62	+0.2
1,824,059	+		LRK53_RS08120	0.78	+0.6
1,824,059	+		LRK53_RS08120	0.78	+0.7
1,824,060	-		LRK53_RS08120	0.79	-1.0
1,824,271	+				-0.9
1,824,271	+				-0.2
1,824,271	+				-1.3
1,824,271	+				-1.4
1,824,271	+				+2.0
1,824,271	+				-0.0
1,824,271	+				-1.3
1,824,271	+				+0.1
1,824,271	+				-1.6
1,824,271	+				-3.2
1,824,272	-				-1.0
1,824,272	-				-1.2
1,824,272	-				+0.4
1,824,272	-				-0.9
1,824,272	-				-0.7
1,824,272	-				-1.3
1,824,272	-				-1.3
1,824,272	-				-1.1
1,824,272	-				-1.4
1,824,272	-				-1.0
1,824,272	-				+1.0
1,824,272	-				-0.6
1,824,272	-				-0.6
1,824,272	-				-0.4
1,824,547	+		LRK53_RS08125	0.10	-1.3
1,824,547	+		LRK53_RS08125	0.10	+0.4
1,824,547	+		LRK53_RS08125	0.10	-0.6
1,824,547	+		LRK53_RS08125	0.10	+0.1
1,824,547	+		LRK53_RS08125	0.10	-1.0
1,824,547	+		LRK53_RS08125	0.10	-1.0
1,824,547	+		LRK53_RS08125	0.10	-1.2
1,824,547	+		LRK53_RS08125	0.10	-0.5
1,824,547	+		LRK53_RS08125	0.10	-1.8
1,824,548	-		LRK53_RS08125	0.10	+1.0
1,824,548	-		LRK53_RS08125	0.10	-2.4
1,824,548	-		LRK53_RS08125	0.10	-1.0
1,824,548	-		LRK53_RS08125	0.10	-1.0
1,824,548	-		LRK53_RS08125	0.10	-0.9
1,824,548	-		LRK53_RS08125	0.10	-1.3
1,824,548	-		LRK53_RS08125	0.10	-0.3
1,824,548	-		LRK53_RS08125	0.10	+1.0
1,824,565	+		LRK53_RS08125	0.11	-1.3