Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17340

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
3,809,496	+				-0.5
3,809,496	+				+0.2
3,809,496	+				+1.0
3,809,496	+				+0.2
3,809,497	-				+0.0
3,809,497	-				-1.0
3,809,497	-				-0.2
3,809,497	-				-1.5
3,809,497	-				-0.5
3,809,564	+				-0.5
3,809,565	-				-1.2
3,809,565	-				+0.6
3,809,652	+		LRK53_RS17335	0.14	-0.8
3,809,652	+		LRK53_RS17335	0.14	+0.7
3,809,652	+		LRK53_RS17335	0.14	+0.5
3,809,652	+		LRK53_RS17335	0.14	+0.6
3,809,652	+		LRK53_RS17335	0.14	-0.5
3,809,652	+		LRK53_RS17335	0.14	+1.0
3,809,652	+		LRK53_RS17335	0.14	-0.5
3,809,652	+		LRK53_RS17335	0.14	-0.8
3,809,652	+		LRK53_RS17335	0.14	-0.2
3,809,652	+		LRK53_RS17335	0.14	+2.6
3,809,652	+		LRK53_RS17335	0.14	+0.2
3,809,652	+		LRK53_RS17335	0.14	-0.5
3,809,653	-		LRK53_RS17335	0.14	-1.0
3,809,653	-		LRK53_RS17335	0.14	-0.3
3,809,653	-		LRK53_RS17335	0.14	-1.0
3,809,653	-		LRK53_RS17335	0.14	-1.0
3,809,653	-		LRK53_RS17335	0.14	-0.1
3,809,653	-		LRK53_RS17335	0.14	+0.6
3,809,653	-		LRK53_RS17335	0.14	+0.0
3,809,653	-		LRK53_RS17335	0.14	-1.0
3,809,653	-		LRK53_RS17335	0.14	-0.3
3,809,653	-		LRK53_RS17335	0.14	-0.5
3,809,653	-		LRK53_RS17335	0.14	-2.2
3,809,653	-		LRK53_RS17335	0.14	-0.5
3,809,653	-		LRK53_RS17335	0.14	-2.1
3,809,653	-		LRK53_RS17335	0.14	-0.5
3,809,653	-		LRK53_RS17335	0.14	+0.6
3,809,653	-		LRK53_RS17335	0.14	-0.2
3,809,653	-		LRK53_RS17335	0.14	+2.6
3,809,653	-		LRK53_RS17335	0.14	-0.1
3,809,653	-		LRK53_RS17335	0.14	-1.0
3,809,653	-		LRK53_RS17335	0.14	+1.4
3,809,653	-		LRK53_RS17335	0.14	-0.4
3,809,653	-		LRK53_RS17335	0.14	-0.1
3,809,703	+		LRK53_RS17335	0.29	-0.8
3,809,703	+		LRK53_RS17335	0.29	-0.4
3,809,703	+		LRK53_RS17335	0.29	+1.6
3,809,703	+		LRK53_RS17335	0.29	+1.0
3,809,704	-		LRK53_RS17335	0.29	-0.1
3,809,704	-		LRK53_RS17335	0.29	-0.5
3,809,704	-		LRK53_RS17335	0.29	-0.5
3,809,704	-		LRK53_RS17335	0.29	-1.4
3,809,704	-		LRK53_RS17335	0.29	-1.1
3,809,704	-		LRK53_RS17335	0.29	-0.5
3,809,704	-		LRK53_RS17335	0.29	-1.2
3,809,704	-		LRK53_RS17335	0.29	+2.0
3,809,704	-		LRK53_RS17335	0.29	+1.6
3,809,704	-		LRK53_RS17335	0.29	+0.6
3,809,704	-		LRK53_RS17335	0.29	-1.3
3,809,704	-		LRK53_RS17335	0.29	+0.0
3,809,856	+		LRK53_RS17335	0.75	+0.0
3,809,856	+		LRK53_RS17335	0.75	+0.0
3,809,856	+		LRK53_RS17335	0.75	-0.4
3,809,856	+		LRK53_RS17335	0.75	-0.5
3,809,856	+		LRK53_RS17335	0.75	-1.8
3,809,856	+		LRK53_RS17335	0.75	+0.3
3,809,856	+		LRK53_RS17335	0.75	+1.0
3,809,856	+		LRK53_RS17335	0.75	-1.2
3,809,856	+		LRK53_RS17335	0.75	-0.5
3,809,856	+		LRK53_RS17335	0.75	+0.0
3,809,856	+		LRK53_RS17335	0.75	+0.0
3,809,856	+		LRK53_RS17335	0.75	+1.8
3,809,856	+		LRK53_RS17335	0.75	-1.2
3,809,856	+		LRK53_RS17335	0.75	+0.2
3,809,856	+		LRK53_RS17335	0.75	-0.3
3,809,856	+		LRK53_RS17335	0.75	-0.2
3,809,856	+		LRK53_RS17335	0.75	-1.3
3,809,856	+		LRK53_RS17335	0.75	+0.0
3,809,857	-		LRK53_RS17335	0.76	+1.0
3,809,857	-		LRK53_RS17335	0.76	-0.1
3,809,857	-		LRK53_RS17335	0.76	+0.5
3,809,857	-		LRK53_RS17335	0.76	-0.5
3,809,857	-		LRK53_RS17335	0.76	+0.5
3,809,857	-		LRK53_RS17335	0.76	+0.0
3,809,857	-		LRK53_RS17335	0.76	-0.5
3,809,857	-		LRK53_RS17335	0.76	-0.5
3,809,857	-		LRK53_RS17335	0.76	-1.7
3,809,857	-		LRK53_RS17335	0.76	-1.3
3,809,857	-		LRK53_RS17335	0.76	+0.0
3,809,857	-		LRK53_RS17335	0.76	+2.4
3,809,857	-		LRK53_RS17335	0.76	-0.5
3,809,857	-		LRK53_RS17335	0.76	-1.0
3,809,857	-		LRK53_RS17335	0.76	+1.0
3,809,857	-		LRK53_RS17335	0.76	+2.6
3,809,857	-		LRK53_RS17335	0.76	-0.3
3,810,155	-		LRK53_RS17340	0.18	+0.0
3,810,383	-		LRK53_RS17340	0.43	-1.5
3,810,383	-		LRK53_RS17340	0.43	-1.5
3,810,521	+		LRK53_RS17340	0.58	+1.0
3,810,522	-		LRK53_RS17340	0.58	-1.0
3,810,669	-		LRK53_RS17340	0.74	-1.5
3,810,671	-		LRK53_RS17340	0.74	-1.4
3,810,671	-		LRK53_RS17340	0.74	+0.2
3,810,681	-		LRK53_RS17340	0.75	+0.0
3,810,681	-		LRK53_RS17340	0.75	+0.0
3,810,681	-		LRK53_RS17340	0.75	-1.0
3,811,136	+				-1.4
3,811,136	+				+0.0
3,811,137	-				+0.5
3,811,137	-				-2.0
3,811,137	-				-0.8
3,811,137	-				+0.0
3,811,137	-				-0.1
3,811,137	-				-1.5
3,811,321	+				-0.4
3,811,321	+				-0.5
3,811,321	+				-0.9
3,811,321	+				-1.0
3,811,322	-				-0.0
3,811,322	-				-0.5
3,811,390	+				+0.0
3,811,390	+				-1.0
3,811,390	+				-1.6
3,811,390	+				+2.0
3,811,390	+				+0.5
3,811,390	+				-1.8
3,811,390	+				-1.5
3,811,390	+				-1.3
3,811,390	+				-1.0
3,811,390	+				-0.9
3,811,391	-				+0.5
3,811,391	-				-0.2
3,811,391	-				-0.5
3,811,391	-				+0.5
3,811,391	-				-1.0
3,811,391	-				-1.4
3,811,391	-				-2.0
3,811,393	+				-1.7
3,811,393	+				+1.0
3,811,393	+				-1.4
3,811,393	+				-2.4
3,811,393	+				-0.5
3,811,393	+				-0.5
3,811,393	+				+1.0
3,811,393	+				-0.7
3,811,393	+				+0.9
3,811,393	+				+0.5
3,811,393	+				-1.3
3,811,393	+				-0.5
3,811,393	+				+0.6
3,811,393	+				+3.0
3,811,393	+				+1.0
3,811,393	+				+1.0
3,811,393	+				-0.2
3,811,393	+				-0.3
3,811,393	+				-1.0
3,811,393	+				-1.0
3,811,393	+				-0.5
3,811,393	+				-2.8
3,811,393	+				+1.0
3,811,393	+				+0.3
3,811,393	+				-0.5
3,811,393	+				-0.5
3,811,394	-				+0.6
3,811,394	-				-1.5
3,811,394	-				+1.0
3,811,394	-				-2.1
3,811,394	-				-0.4
3,811,394	-				+0.0
3,811,394	-				+0.5
3,811,394	-				-0.8
3,811,394	-				-1.0
3,811,394	-				-0.6
3,811,394	-				-0.3
3,811,394	-				+0.0
3,811,394	-				-0.5
3,811,394	-				+2.0
3,811,394	-				-0.6
3,811,394	-				+2.0
3,811,394	-				+0.4
3,811,394	-				+0.4
3,811,394	-				-2.3
3,811,394	-				-1.6
3,811,394	-				+0.5
3,811,450	+				-2.4
3,811,450	+				-1.7
3,811,450	+				+0.0
3,811,450	+				+1.6
3,811,450	+				+1.6
3,811,451	-				+0.3
3,811,451	-				+0.0
3,811,451	-				+0.7
3,811,451	-				+0.0
3,811,451	-				-1.0
3,811,451	-				-0.5
3,811,451	-				+1.0
3,811,451	-				-1.5
3,811,451	-				+0.5
3,811,451	-				-1.2
3,811,451	-				-1.1
3,811,461	+				+1.0
3,811,461	+				-0.8
3,811,461	+				+1.6
3,811,462	-				-1.0
3,811,462	-				-0.7
3,811,462	-				+1.0
3,811,539	+				+0.2
3,811,539	+				-0.5
3,811,539	+				-1.4
3,811,539	+				+0.5
3,811,539	+				+0.0
3,811,539	+				-0.5
3,811,539	+				+1.0
3,811,539	+				+0.6
3,811,539	+				-1.5
3,811,539	+				+0.2
3,811,539	+				+2.0
3,811,539	+				-0.5
3,811,539	+				-0.7
3,811,539	+				+0.7
3,811,539	+				+1.0
3,811,539	+				-1.8
3,811,539	+				+0.5
3,811,539	+				-0.3
3,811,539	+				+0.0
3,811,540	-				+0.6
3,811,540	-				-0.5
3,811,540	-				+0.7
3,811,540	-				-0.3
3,811,540	-				-0.7
3,811,540	-				-0.5
3,811,540	-				+0.0
3,811,540	-				-0.0
3,811,540	-				-1.2
3,811,540	-				+1.0
3,811,540	-				-2.4
3,811,540	-				+0.5
3,811,540	-				+1.6
3,811,540	-				-1.0
3,811,540	-				+0.6
3,811,619	+		LRK53_RS17345	0.15	+1.0
3,811,619	+		LRK53_RS17345	0.15	+0.2
3,811,619	+		LRK53_RS17345	0.15	-0.5
3,811,619	+		LRK53_RS17345	0.15	-1.0
3,811,619	+		LRK53_RS17345	0.15	-1.0
3,811,619	+		LRK53_RS17345	0.15	+1.0
3,811,619	+		LRK53_RS17345	0.15	-0.2
3,811,619	+		LRK53_RS17345	0.15	-1.5
3,811,619	+		LRK53_RS17345	0.15	+1.6
3,811,620	-		LRK53_RS17345	0.16	-0.3
3,811,620	-		LRK53_RS17345	0.16	-0.5
3,811,620	-		LRK53_RS17345	0.16	-1.0
3,811,620	-		LRK53_RS17345	0.16	-2.4
3,811,620	-		LRK53_RS17345	0.16	+0.0
3,811,620	-		LRK53_RS17345	0.16	+0.0
3,811,620	-		LRK53_RS17345	0.16	+1.0
3,811,669	+		LRK53_RS17345	0.36	+0.0
3,811,670	-		LRK53_RS17345	0.37	+0.0
3,811,748	+		LRK53_RS17345	0.69	-0.5
3,811,748	+		LRK53_RS17345	0.69	-0.5
3,811,748	+		LRK53_RS17345	0.69	-0.8
3,811,748	+		LRK53_RS17345	0.69	-1.5
3,811,748	+		LRK53_RS17345	0.69	-0.5
3,811,748	+		LRK53_RS17345	0.69	+0.0
3,811,748	+		LRK53_RS17345	0.69	-0.8
3,811,748	+		LRK53_RS17345	0.69	+0.4
3,811,748	+		LRK53_RS17345	0.69	-1.3
3,811,748	+		LRK53_RS17345	0.69	+0.0
3,811,748	+		LRK53_RS17345	0.69	+0.0
3,811,748	+		LRK53_RS17345	0.69	-0.5
3,811,748	+		LRK53_RS17345	0.69	-0.7
3,811,749	-		LRK53_RS17345	0.70	-0.9
3,811,749	-		LRK53_RS17345	0.70	+0.2
3,811,749	-		LRK53_RS17345	0.70	-1.0
3,811,749	-		LRK53_RS17345	0.70	-1.0
3,811,897	+				+0.0
3,811,897	+				+1.0
3,811,897	+				-0.8
3,811,897	+				+1.0
3,811,897	+				-0.2
3,811,897	+				-0.8
3,811,898	-				+0.0
3,811,898	-				-1.3
3,811,898	-				+1.6
3,811,898	-				+0.7