Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14545

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
3,185,122	+		LRK53_RS14535	0.81	-1.2
3,185,122	+		LRK53_RS14535	0.81	-0.0
3,185,122	+		LRK53_RS14535	0.81	-1.1
3,185,123	-		LRK53_RS14535	0.81	-0.0
3,185,123	-		LRK53_RS14535	0.81	-2.2
3,185,123	-		LRK53_RS14535	0.81	+0.2
3,185,123	-		LRK53_RS14535	0.81	+0.1
3,185,123	-		LRK53_RS14535	0.81	-1.0
3,185,123	-		LRK53_RS14535	0.81	+0.4
3,185,123	-		LRK53_RS14535	0.81	-0.7
3,185,125	+		LRK53_RS14535	0.81	-0.3
3,185,125	+		LRK53_RS14535	0.81	+0.8
3,185,125	+		LRK53_RS14535	0.81	-1.6
3,185,125	+		LRK53_RS14535	0.81	-2.0
3,185,125	+		LRK53_RS14535	0.81	+0.7
3,185,125	+		LRK53_RS14535	0.81	-3.4
3,185,125	+		LRK53_RS14535	0.81	-0.0
3,185,125	+		LRK53_RS14535	0.81	-0.0
3,185,125	+		LRK53_RS14535	0.81	+1.0
3,185,125	+		LRK53_RS14535	0.81	+1.0
3,185,125	+		LRK53_RS14535	0.81	-1.0
3,185,125	+		LRK53_RS14535	0.81	-0.2
3,185,125	+		LRK53_RS14535	0.81	+1.0
3,185,125	+		LRK53_RS14535	0.81	+0.6
3,185,125	+		LRK53_RS14535	0.81	-0.6
3,185,125	+		LRK53_RS14535	0.81	+1.0
3,185,125	+		LRK53_RS14535	0.81	-0.0
3,185,125	+		LRK53_RS14535	0.81	+1.0
3,185,126	-		LRK53_RS14535	0.81	-0.0
3,185,126	-		LRK53_RS14535	0.81	-0.3
3,185,126	-		LRK53_RS14535	0.81	-0.3
3,185,126	-		LRK53_RS14535	0.81	+1.0
3,185,126	-		LRK53_RS14535	0.81	-0.4
3,185,126	-		LRK53_RS14535	0.81	-1.0
3,185,126	-		LRK53_RS14535	0.81	-0.0
3,185,126	-		LRK53_RS14535	0.81	-0.0
3,185,126	-		LRK53_RS14535	0.81	+1.0
3,185,126	-		LRK53_RS14535	0.81	+1.0
3,185,126	-		LRK53_RS14535	0.81	-0.8
3,185,126	-		LRK53_RS14535	0.81	-1.3
3,185,126	-		LRK53_RS14535	0.81	+0.4
3,185,126	-		LRK53_RS14535	0.81	+0.4
3,185,126	-		LRK53_RS14535	0.81	-0.0
3,185,126	-		LRK53_RS14535	0.81	+0.3
3,185,126	-		LRK53_RS14535	0.81	-0.3
3,185,126	-		LRK53_RS14535	0.81	-2.2
3,185,182	+		LRK53_RS14535	0.83	+0.4
3,185,182	+		LRK53_RS14535	0.83	-1.3
3,185,183	-		LRK53_RS14535	0.83	+1.0
3,185,183	-		LRK53_RS14535	0.83	-1.4
3,185,286	+		LRK53_RS14535	0.88	-0.0
3,185,558	-				-1.3
3,185,558	-				-1.0
3,185,558	-				+1.0
3,185,569	+				-0.0
3,185,569	+				+0.2
3,185,569	+				-0.6
3,185,569	+				-0.0
3,185,569	+				-0.7
3,185,569	+				+0.1
3,185,569	+				+2.0
3,185,570	-				-0.3
3,185,570	-				-0.6
3,185,570	-				-0.0
3,185,570	-				-0.6
3,185,570	-				-1.0
3,185,570	-				+1.0
3,185,570	-				-1.3
3,185,570	-				-0.1
3,185,570	-				-0.7
3,185,570	-				+1.0
3,185,570	-				-1.0
3,185,570	-				-0.0
3,185,570	-				-1.0
3,185,570	-				-0.7
3,185,570	-				-0.6
3,185,578	+				+0.2
3,185,578	+				-1.3
3,185,578	+				+0.5
3,185,578	+				+1.0
3,185,578	+				-1.0
3,185,578	+				-0.9
3,185,578	+				+0.2
3,185,578	+				+0.7
3,185,578	+				-0.7
3,185,578	+				-0.0
3,185,578	+				+1.0
3,185,578	+				-0.3
3,185,578	+				-0.0
3,185,579	-				-1.0
3,185,579	-				-2.6
3,185,579	-				-0.6
3,185,579	-				-0.4
3,185,579	-				+1.0
3,185,579	-				-0.6
3,185,579	-				-1.1
3,185,579	-				-0.0
3,185,579	-				-0.8
3,185,579	-				+0.6
3,185,579	-				+0.6
3,185,579	-				+1.0
3,185,579	-				-1.6
3,185,579	-				+0.5
3,185,579	-				-0.0
3,185,579	-				+0.4
3,185,654	+				-1.5
3,185,654	+				-0.7
3,185,654	+				-0.0
3,185,655	-				-0.0
3,185,783	+		LRK53_RS14540	0.35	-1.0
3,185,784	-		LRK53_RS14540	0.35	-0.0
3,185,894	+		LRK53_RS14540	0.62	-0.6
3,185,894	+		LRK53_RS14540	0.62	-0.9
3,185,894	+		LRK53_RS14540	0.62	-0.6
3,185,894	+		LRK53_RS14540	0.62	-0.0
3,185,895	-		LRK53_RS14540	0.62	-1.9
3,185,895	-		LRK53_RS14540	0.62	-1.0
3,185,895	-		LRK53_RS14540	0.62	-0.6
3,185,895	-		LRK53_RS14540	0.62	-0.2
3,185,895	-		LRK53_RS14540	0.62	-1.3
3,185,895	-		LRK53_RS14540	0.62	-0.0
3,185,895	-		LRK53_RS14540	0.62	+0.2
3,185,978	+		LRK53_RS14540	0.83	-0.2
3,185,978	+		LRK53_RS14540	0.83	-0.8
3,185,978	+		LRK53_RS14540	0.83	-0.6
3,185,978	+		LRK53_RS14540	0.83	-0.6
3,185,978	+		LRK53_RS14540	0.83	-1.3
3,185,978	+		LRK53_RS14540	0.83	-0.7
3,185,978	+		LRK53_RS14540	0.83	-0.3
3,185,978	+		LRK53_RS14540	0.83	-0.8
3,185,978	+		LRK53_RS14540	0.83	+0.4
3,185,978	+		LRK53_RS14540	0.83	-1.6
3,185,978	+		LRK53_RS14540	0.83	-0.0
3,185,978	+		LRK53_RS14540	0.83	-1.2
3,185,978	+		LRK53_RS14540	0.83	-0.2
3,185,978	+		LRK53_RS14540	0.83	+1.0
3,185,978	+		LRK53_RS14540	0.83	-0.0
3,185,978	+		LRK53_RS14540	0.83	-0.9
3,185,978	+		LRK53_RS14540	0.83	-0.6
3,185,978	+		LRK53_RS14540	0.83	-1.6
3,185,978	+		LRK53_RS14540	0.83	-0.8
3,185,979	-		LRK53_RS14540	0.83	-0.0
3,185,979	-		LRK53_RS14540	0.83	-1.9
3,185,979	-		LRK53_RS14540	0.83	-1.6
3,185,979	-		LRK53_RS14540	0.83	+0.2
3,185,979	-		LRK53_RS14540	0.83	-1.0
3,185,979	-		LRK53_RS14540	0.83	-1.3
3,185,979	-		LRK53_RS14540	0.83	+0.6
3,185,979	-		LRK53_RS14540	0.83	-0.0
3,185,979	-		LRK53_RS14540	0.83	+0.3
3,185,979	-		LRK53_RS14540	0.83	+1.0
3,185,979	-		LRK53_RS14540	0.83	-2.0
3,185,979	-		LRK53_RS14540	0.83	-0.0
3,185,979	-		LRK53_RS14540	0.83	-1.0
3,185,979	-		LRK53_RS14540	0.83	-0.0
3,185,979	-		LRK53_RS14540	0.83	-3.0
3,185,984	+		LRK53_RS14540	0.84	-0.6
3,185,984	+		LRK53_RS14540	0.84	-1.0
3,185,984	+		LRK53_RS14540	0.84	+0.2
3,185,984	+		LRK53_RS14540	0.84	+1.0
3,185,984	+		LRK53_RS14540	0.84	-0.0
3,185,984	+		LRK53_RS14540	0.84	+1.0
3,185,984	+		LRK53_RS14540	0.84	-2.0
3,185,984	+		LRK53_RS14540	0.84	-0.0
3,185,985	-		LRK53_RS14540	0.85	-0.6
3,185,985	-		LRK53_RS14540	0.85	-0.6
3,185,985	-		LRK53_RS14540	0.85	-0.0
3,185,985	-		LRK53_RS14540	0.85	-1.6
3,185,985	-		LRK53_RS14540	0.85	+1.0
3,185,985	-		LRK53_RS14540	0.85	-0.0
3,185,985	-		LRK53_RS14540	0.85	+0.2
3,185,985	-		LRK53_RS14540	0.85	-0.0
3,185,985	-		LRK53_RS14540	0.85	-0.0
3,185,985	-		LRK53_RS14540	0.85	-1.0
3,185,985	-		LRK53_RS14540	0.85	+0.6
3,185,985	-		LRK53_RS14540	0.85	-0.7
3,185,985	-		LRK53_RS14540	0.85	-0.6
3,185,985	-		LRK53_RS14540	0.85	-1.3
3,186,004	+		LRK53_RS14540	0.89	-1.5
3,186,004	+		LRK53_RS14540	0.89	+0.4
3,186,004	+		LRK53_RS14540	0.89	-0.2
3,186,005	-		LRK53_RS14540	0.90	-0.6
3,186,176	-				+0.4
3,186,244	+		LRK53_RS14545	0.10	+1.0
3,186,245	-		LRK53_RS14545	0.10	-1.0
3,186,332	-		LRK53_RS14545	0.15	-0.7
3,186,332	-		LRK53_RS14545	0.15	+0.4
3,186,397	+		LRK53_RS14545	0.18	-0.4
3,186,397	+		LRK53_RS14545	0.18	-1.3
3,186,397	+		LRK53_RS14545	0.18	-0.5
3,186,398	-		LRK53_RS14545	0.18	-1.1
3,186,398	-		LRK53_RS14545	0.18	+2.0
3,186,398	-		LRK53_RS14545	0.18	+1.4
3,186,556	+		LRK53_RS14545	0.26	-0.6
3,186,556	+		LRK53_RS14545	0.26	+1.0
3,186,556	+		LRK53_RS14545	0.26	-0.2
3,186,556	+		LRK53_RS14545	0.26	-1.1
3,186,557	-		LRK53_RS14545	0.26	-2.6
3,186,557	-		LRK53_RS14545	0.26	-0.0
3,186,557	-		LRK53_RS14545	0.26	-0.2
3,186,557	-		LRK53_RS14545	0.26	+2.3
3,186,856	+		LRK53_RS14545	0.42	-0.0
3,186,857	-		LRK53_RS14545	0.42	-0.0
3,186,992	+		LRK53_RS14545	0.49	-0.6
3,186,993	-		LRK53_RS14545	0.49	-0.3
3,187,028	-		LRK53_RS14545	0.50	+1.0
3,187,103	+		LRK53_RS14545	0.54	+1.0
3,187,104	-		LRK53_RS14545	0.54	+0.2
3,187,195	+		LRK53_RS14545	0.59	+1.0
3,187,195	+		LRK53_RS14545	0.59	-0.0
3,187,196	-		LRK53_RS14545	0.59	-0.6
3,187,196	-		LRK53_RS14545	0.59	+1.0
3,187,196	-		LRK53_RS14545	0.59	-0.9
3,187,285	+		LRK53_RS14545	0.63	-0.6
3,187,286	-		LRK53_RS14545	0.64	-0.6
3,187,286	-		LRK53_RS14545	0.64	+1.0
3,187,286	-		LRK53_RS14545	0.64	-1.6
3,187,286	-		LRK53_RS14545	0.64	-0.9
3,187,286	-		LRK53_RS14545	0.64	-0.6
3,187,360	+		LRK53_RS14545	0.67	+0.1
3,187,360	+		LRK53_RS14545	0.67	+1.0
3,187,360	+		LRK53_RS14545	0.67	+1.0
3,187,361	-		LRK53_RS14545	0.67	-0.9
3,187,361	-		LRK53_RS14545	0.67	-1.3
3,187,465	+		LRK53_RS14545	0.73	+0.4
3,187,465	+		LRK53_RS14545	0.73	+1.6
3,187,465	+		LRK53_RS14545	0.73	+1.0
3,187,465	+		LRK53_RS14545	0.73	-0.0
3,187,465	+		LRK53_RS14545	0.73	-1.5
3,187,465	+		LRK53_RS14545	0.73	+1.2
3,187,465	+		LRK53_RS14545	0.73	-0.0
3,187,466	-		LRK53_RS14545	0.73	-0.0
3,187,466	-		LRK53_RS14545	0.73	-0.0
3,187,466	-		LRK53_RS14545	0.73	-1.0
3,187,481	+		LRK53_RS14545	0.74	+1.0
3,187,481	+		LRK53_RS14545	0.74	+1.0
3,187,482	-		LRK53_RS14545	0.74	-1.0
3,187,482	-		LRK53_RS14545	0.74	-0.0
3,187,482	-		LRK53_RS14545	0.74	-1.3
3,187,482	-		LRK53_RS14545	0.74	+0.4
3,187,482	-		LRK53_RS14545	0.74	-0.2
3,187,482	-		LRK53_RS14545	0.74	+1.0
3,187,482	-		LRK53_RS14545	0.74	-0.6
3,187,699	+		LRK53_RS14545	0.85	+2.0
3,187,699	+		LRK53_RS14545	0.85	-1.2
3,187,699	+		LRK53_RS14545	0.85	+0.4
3,187,699	+		LRK53_RS14545	0.85	-0.8
3,187,699	+		LRK53_RS14545	0.85	-1.0
3,187,699	+		LRK53_RS14545	0.85	-0.0
3,187,699	+		LRK53_RS14545	0.85	+1.0
3,187,700	-		LRK53_RS14545	0.85	+1.0
3,187,700	-		LRK53_RS14545	0.85	-1.3
3,187,700	-		LRK53_RS14545	0.85	+1.6
3,187,895	-				-1.0
3,187,924	+				-1.0
3,187,924	+				-0.6
3,187,924	+				+0.4
3,187,924	+				-0.0
3,187,925	-				-0.0
3,187,925	-				-0.4
3,187,925	-				+2.0
3,187,925	-				-0.6
3,187,925	-				-0.7
3,187,925	-				-2.0
3,187,925	-				-0.8
3,187,925	-				-1.7
3,187,925	-				+1.6
3,187,936	+				-1.3
3,187,936	+				-0.0
3,187,937	-				-1.3
3,187,982	+				+1.0
3,187,982	+				+0.4
3,187,983	-				+0.4
3,188,166	+		LRK53_RS14550	0.14	-1.3
3,188,167	-		LRK53_RS14550	0.14	-0.0
3,188,167	-		LRK53_RS14550	0.14	-0.6
3,188,167	-		LRK53_RS14550	0.14	-0.0
3,188,167	-		LRK53_RS14550	0.14	+1.0
3,188,235	+		LRK53_RS14550	0.20	-0.0
3,188,235	+		LRK53_RS14550	0.20	-0.8
3,188,235	+		LRK53_RS14550	0.20	-1.0
3,188,235	+		LRK53_RS14550	0.20	-1.8
3,188,235	+		LRK53_RS14550	0.20	+1.0
3,188,235	+		LRK53_RS14550	0.20	-0.6
3,188,235	+		LRK53_RS14550	0.20	-0.0
3,188,236	-		LRK53_RS14550	0.20	-0.3
3,188,236	-		LRK53_RS14550	0.20	+2.0
3,188,236	-		LRK53_RS14550	0.20	-1.2
3,188,236	-		LRK53_RS14550	0.20	+0.2
3,188,236	-		LRK53_RS14550	0.20	-1.0
3,188,236	-		LRK53_RS14550	0.20	-0.0
3,188,236	-		LRK53_RS14550	0.20	+0.4
3,188,236	-		LRK53_RS14550	0.20	-0.2
3,188,236	-		LRK53_RS14550	0.20	-1.0
3,188,236	-		LRK53_RS14550	0.20	-0.8
3,188,236	-		LRK53_RS14550	0.20	-0.0
3,188,236	-		LRK53_RS14550	0.20	+2.0
3,188,236	-		LRK53_RS14550	0.20	-0.3
3,188,236	-		LRK53_RS14550	0.20	-0.0
3,188,643	+		LRK53_RS14550	0.57	+0.6
3,188,644	-		LRK53_RS14550	0.57	-1.3
3,188,666	+		LRK53_RS14550	0.59	-1.0
3,188,666	+		LRK53_RS14550	0.59	+0.5
3,188,667	-		LRK53_RS14550	0.59	-1.0
3,188,667	-		LRK53_RS14550	0.59	+0.2
3,188,667	-		LRK53_RS14550	0.59	-0.0
3,188,703	+		LRK53_RS14550	0.62	-0.6
3,188,703	+		LRK53_RS14550	0.62	-0.5
3,188,704	-		LRK53_RS14550	0.62	-1.0