Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13415

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
2,961,898	-				-0.4
2,961,898	-				-0.2
2,961,898	-				+0.4
2,961,934	-				-0.6
2,961,960	-				-0.1
2,961,960	-				-1.3
2,961,960	-				-0.6
2,961,960	-				+1.0
2,961,960	-				-1.3
2,961,960	-				-1.1
2,961,960	-				-0.5
2,962,049	-				-0.8
2,962,049	-				-0.6
2,962,049	-				-0.8
2,962,049	-				-0.0
2,962,049	-				-1.6
2,962,049	-				-0.6
2,962,049	-				-0.0
2,962,049	-				-0.6
2,962,049	-				-3.1
2,962,049	-				+1.0
2,962,049	-				-0.5
2,962,049	-				-0.1
2,962,049	-				+0.6
2,962,049	-				-1.3
2,962,049	-				-0.8
2,962,049	-				+0.1
2,962,049	-				-0.8
2,962,049	-				-0.9
2,962,049	-				-1.2
2,962,049	-				-0.2
2,962,049	-				-0.6
2,962,049	-				+0.5
2,962,049	-				-1.0
2,962,049	-				+1.0
2,962,049	-				-1.0
2,962,710	-				-1.1
2,962,710	-				+1.6
2,963,075	+		LRK53_RS13415	0.52	-0.6
2,963,075	+		LRK53_RS13415	0.52	-1.2
2,963,076	-		LRK53_RS13415	0.52	-1.6
2,963,187	-		LRK53_RS13415	0.69	-1.0
2,963,428	+				-0.6
2,963,428	+				-0.2
2,963,428	+				-0.6
2,963,428	+				+3.3
2,963,429	-				-0.9
2,963,429	-				+0.6
2,963,429	-				+1.0
2,963,435	+				-0.2
2,963,435	+				-0.2
2,963,435	+				-1.0
2,963,435	+				-0.6
2,963,435	+				-1.0
2,963,435	+				-0.6
2,963,436	-				+2.0
2,963,436	-				-0.8
2,963,436	-				-0.6
2,963,436	-				+1.0
2,963,436	-				-0.6
2,963,436	-				-0.3
2,963,436	-				-0.8
2,963,436	-				-0.4
2,963,436	-				-1.6
2,963,475	+				+1.2
2,963,475	+				-1.9
2,963,476	-				+0.6
2,963,476	-				-0.6
2,963,476	-				-0.0
2,963,476	-				+2.4
2,963,496	+				-0.7
2,963,496	+				-0.0
2,963,496	+				-1.3
2,963,496	+				+0.8
2,963,496	+				-0.6
2,963,496	+				+2.0
2,963,496	+				-1.8
2,963,496	+				+3.0
2,963,496	+				-2.0
2,963,496	+				-1.3
2,963,496	+				+0.2
2,963,496	+				-1.5
2,963,496	+				-0.0
2,963,497	-				+0.6
2,963,497	-				+0.2
2,963,497	-				+1.4
2,963,497	-				+0.5
2,963,497	-				+0.4
2,963,497	-				+0.4
2,963,497	-				-0.6
2,963,497	-				+0.4
2,963,497	-				+2.3
2,963,497	-				+1.0
2,963,497	-				-1.1
2,963,497	-				+0.2
2,963,497	-				+0.7
2,963,497	-				-0.3
2,963,497	-				-0.9
2,963,498	+				-0.9
2,963,498	+				-0.0
2,963,498	+				-0.6
2,963,498	+				-0.2
2,963,498	+				+1.0
2,963,498	+				-0.6
2,963,498	+				+1.0
2,963,498	+				-0.3
2,963,591	-				-0.0
2,963,664	+				-0.0
2,963,664	+				-0.0
2,963,664	+				-0.6
2,963,665	-				-1.3
2,963,707	-				-0.0
2,963,841	+		LRK53_RS13420	0.11	-0.6
2,963,841	+		LRK53_RS13420	0.11	-2.0
2,963,841	+		LRK53_RS13420	0.11	-1.0
2,963,841	+		LRK53_RS13420	0.11	-1.0
2,963,841	+		LRK53_RS13420	0.11	-0.0
2,963,841	+		LRK53_RS13420	0.11	-0.6
2,963,841	+		LRK53_RS13420	0.11	-0.0
2,963,841	+		LRK53_RS13420	0.11	+0.4
2,963,841	+		LRK53_RS13420	0.11	-0.0
2,963,841	+		LRK53_RS13420	0.11	-0.0
2,963,841	+		LRK53_RS13420	0.11	-0.0
2,963,842	-		LRK53_RS13420	0.11	+1.0
2,963,842	-		LRK53_RS13420	0.11	+2.0
2,963,842	-		LRK53_RS13420	0.11	-1.0
2,963,842	-		LRK53_RS13420	0.11	-0.0
2,963,842	-		LRK53_RS13420	0.11	-2.2
2,963,847	+		LRK53_RS13420	0.11	-0.3
2,963,848	-		LRK53_RS13420	0.11	-1.9
2,963,848	-		LRK53_RS13420	0.11	+1.0
2,963,848	-		LRK53_RS13420	0.11	+2.0
2,963,848	-		LRK53_RS13420	0.11	+1.0
2,963,862	+		LRK53_RS13420	0.11	-1.3
2,963,863	-		LRK53_RS13420	0.11	+1.0
2,963,863	-		LRK53_RS13420	0.11	-0.6
2,963,970	+		LRK53_RS13420	0.15	-0.0
2,963,970	+		LRK53_RS13420	0.15	+0.2
2,963,970	+		LRK53_RS13420	0.15	+1.0
2,963,970	+		LRK53_RS13420	0.15	+2.0
2,963,970	+		LRK53_RS13420	0.15	-0.0
2,963,970	+		LRK53_RS13420	0.15	+1.0
2,963,970	+		LRK53_RS13420	0.15	-0.6
2,963,970	+		LRK53_RS13420	0.15	-0.0
2,963,971	-		LRK53_RS13420	0.15	-0.0
2,964,078	+		LRK53_RS13420	0.19	+0.1
2,964,078	+		LRK53_RS13420	0.19	-0.0
2,964,078	+		LRK53_RS13420	0.19	+1.0
2,964,078	+		LRK53_RS13420	0.19	-1.0
2,964,079	-		LRK53_RS13420	0.19	+1.0
2,964,079	-		LRK53_RS13420	0.19	+0.7
2,964,079	-		LRK53_RS13420	0.19	-0.6
2,964,301	-		LRK53_RS13420	0.26	-0.0
2,964,301	-		LRK53_RS13420	0.26	+2.6