Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13055

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
2,881,227	-				+0.3
2,881,227	-				-0.6
2,881,227	-				+2.6
2,881,227	-				-1.1
2,881,227	-				-0.0
2,881,227	-				-0.0
2,881,227	-				-1.5
2,881,292	+				-1.4
2,881,292	+				-0.6
2,881,292	+				-1.0
2,881,293	-				-2.3
2,881,293	-				-0.0
2,881,293	-				-2.0
2,881,293	-				-1.9
2,881,293	-				+0.4
2,881,293	-				+1.0
2,881,293	-				+2.3
2,881,293	-				-1.6
2,881,311	+				+0.4
2,881,311	+				-0.7
2,881,311	+				-1.0
2,881,311	+				+0.8
2,881,311	+				-1.0
2,881,311	+				-1.0
2,881,311	+				-0.3
2,881,311	+				-0.6
2,881,311	+				-0.0
2,881,311	+				-1.7
2,881,311	+				-0.7
2,881,311	+				-1.0
2,881,311	+				-1.6
2,881,311	+				-1.0
2,881,311	+				+1.0
2,881,311	+				-1.3
2,881,311	+				-0.1
2,881,311	+				-1.4
2,881,311	+				-0.8
2,881,311	+				-1.0
2,881,311	+				-0.0
2,881,311	+				-0.3
2,881,311	+				-1.6
2,881,311	+				-0.4
2,881,311	+				-1.3
2,881,311	+				-0.6
2,881,311	+				-0.1
2,881,312	-				+0.3
2,881,312	-				-1.2
2,881,312	-				-0.6
2,881,312	-				-1.6
2,881,312	-				-0.2
2,881,312	-				-0.0
2,881,312	-				-0.1
2,881,312	-				-1.6
2,881,312	-				-0.6
2,881,312	-				-1.0
2,881,312	-				+0.6
2,881,312	-				+0.2
2,881,312	-				-0.5
2,881,312	-				+0.4
2,881,312	-				-0.0
2,881,312	-				-1.3
2,881,312	-				-0.8
2,881,312	-				-1.0
2,881,312	-				-1.0
2,881,312	-				-0.9
2,881,464	+		LRK53_RS13040	0.82	-0.0
2,881,465	-		LRK53_RS13040	0.83	-0.0
2,881,470	+		LRK53_RS13040	0.86	-1.1
2,881,470	+		LRK53_RS13040	0.86	-0.6
2,881,470	+		LRK53_RS13040	0.86	-0.6
2,881,470	+		LRK53_RS13040	0.86	-0.6
2,881,470	+		LRK53_RS13040	0.86	-1.6
2,881,471	-		LRK53_RS13040	0.86	-2.3
2,881,471	-		LRK53_RS13040	0.86	-1.0
2,881,471	-		LRK53_RS13040	0.86	-0.9
2,881,471	-		LRK53_RS13040	0.86	-0.0
2,881,471	-		LRK53_RS13040	0.86	+1.0
2,881,471	-		LRK53_RS13040	0.86	-0.3
2,881,471	-		LRK53_RS13040	0.86	+0.4
2,881,471	-		LRK53_RS13040	0.86	-0.6
2,881,491	+				-0.9
2,881,492	-				-0.7
2,881,547	+				-1.8
2,881,547	+				-1.5
2,881,710	+		LRK53_RS13045	0.61	-0.5
2,881,710	+		LRK53_RS13045	0.61	-0.0
2,881,710	+		LRK53_RS13045	0.61	-1.6
2,881,710	+		LRK53_RS13045	0.61	-0.5
2,881,710	+		LRK53_RS13045	0.61	-0.8
2,881,710	+		LRK53_RS13045	0.61	-1.5
2,881,710	+		LRK53_RS13045	0.61	+1.0
2,881,711	-		LRK53_RS13045	0.61	-1.0
2,881,711	-		LRK53_RS13045	0.61	-0.3
2,881,711	-		LRK53_RS13045	0.61	-0.0
2,881,711	-		LRK53_RS13045	0.61	-1.3
2,881,711	-		LRK53_RS13045	0.61	+0.4
2,881,711	-		LRK53_RS13045	0.61	-0.0
2,881,711	-		LRK53_RS13045	0.61	+1.0
2,881,711	-		LRK53_RS13045	0.61	+0.3
2,881,725	-		LRK53_RS13045	0.71	-0.6
2,881,767	+				+1.0
2,881,768	-				-0.6
2,881,768	-				-1.1
2,881,768	-				+2.0
2,881,768	-				-1.0
2,881,859	+				-0.3
2,881,859	+				-0.3
2,881,859	+				-0.8
2,881,859	+				-1.2
2,881,860	-				-0.1
2,881,860	-				-0.9
2,881,860	-				-1.3
2,881,860	-				+0.1
2,881,860	-				-2.9
2,881,877	+				-0.9
2,881,878	-				-1.3
2,881,928	+		LRK53_RS13050	0.12	-0.8
2,881,928	+		LRK53_RS13050	0.12	+1.0
2,881,929	-		LRK53_RS13050	0.13	+0.3
2,881,929	-		LRK53_RS13050	0.13	-1.0
2,881,929	-		LRK53_RS13050	0.13	+0.1
2,881,985	+		LRK53_RS13050	0.31	-1.3
2,881,985	+		LRK53_RS13050	0.31	+1.0
2,881,986	-		LRK53_RS13050	0.31	+0.4
2,881,986	-		LRK53_RS13050	0.31	-1.6
2,881,986	-		LRK53_RS13050	0.31	-1.0
2,882,039	+		LRK53_RS13050	0.48	+0.2
2,882,148	+		LRK53_RS13050	0.83	-0.2
2,882,148	+		LRK53_RS13050	0.83	-1.1
2,882,149	-		LRK53_RS13050	0.83	+0.7
2,882,149	-		LRK53_RS13050	0.83	+1.0
2,882,149	-		LRK53_RS13050	0.83	-1.0
2,882,188	+				-0.0
2,882,270	-		LRK53_RS13055	0.12	-1.7
2,882,459	-		LRK53_RS13055	0.66	+0.3
2,882,459	-		LRK53_RS13055	0.66	+1.0
2,882,465	+		LRK53_RS13055	0.67	-1.2
2,882,465	+		LRK53_RS13055	0.67	-1.0
2,882,466	-		LRK53_RS13055	0.68	-1.6
2,882,466	-		LRK53_RS13055	0.68	+0.4
2,882,466	-		LRK53_RS13055	0.68	-1.6
2,882,466	-		LRK53_RS13055	0.68	-1.3
2,882,466	-		LRK53_RS13055	0.68	-0.6
2,882,494	+		LRK53_RS13055	0.75	+1.0
2,882,494	+		LRK53_RS13055	0.75	-2.2
2,882,494	+		LRK53_RS13055	0.75	-1.7
2,882,494	+		LRK53_RS13055	0.75	-0.6
2,882,494	+		LRK53_RS13055	0.75	-0.2
2,882,494	+		LRK53_RS13055	0.75	-0.0
2,882,495	-		LRK53_RS13055	0.76	-1.1
2,882,495	-		LRK53_RS13055	0.76	-0.6
2,882,513	-		LRK53_RS13055	0.81	-1.6
2,882,549	+				-1.0
2,882,647	+		LRK53_RS13060	0.14	-0.6
2,882,647	+		LRK53_RS13060	0.14	-1.5
2,882,648	-		LRK53_RS13060	0.14	-0.0
2,882,648	-		LRK53_RS13060	0.14	-0.9
2,882,648	-		LRK53_RS13060	0.14	+0.1
2,882,882	+				+1.4
2,882,882	+				-0.6
2,882,883	-				-0.6
2,882,902	+				-0.6
2,882,902	+				-0.3
2,882,903	-				-0.3
2,882,903	-				-1.3
2,882,903	-				-2.6
2,882,909	+				-0.8
2,882,909	+				-0.0
2,882,909	+				-2.8
2,882,909	+				-1.3
2,882,909	+				-0.6
2,882,909	+				-0.6
2,882,909	+				-0.3
2,882,909	+				-1.0
2,882,909	+				-0.3
2,882,909	+				-1.0
2,882,909	+				-0.6
2,882,910	-				-0.6
2,882,910	-				+2.0
2,882,910	-				-1.6
2,882,910	-				+1.0
2,882,910	-				+0.4
2,882,910	-				-0.3
2,882,910	-				-1.0
2,882,910	-				+1.0
2,882,910	-				+1.0
2,883,186	-				+1.4
2,883,281	+		LRK53_RS13065	0.12	-0.6
2,883,281	+		LRK53_RS13065	0.12	+1.0
2,883,282	-		LRK53_RS13065	0.12	-0.0
2,883,282	-		LRK53_RS13065	0.12	-0.8
2,883,282	-		LRK53_RS13065	0.12	+2.0
2,883,282	-		LRK53_RS13065	0.12	-1.8
2,883,396	-		LRK53_RS13065	0.18	+0.2
2,883,518	+		LRK53_RS13065	0.25	+0.7
2,883,518	+		LRK53_RS13065	0.25	-0.3
2,883,519	-		LRK53_RS13065	0.25	+1.0
2,883,519	-		LRK53_RS13065	0.25	-1.5