Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13020

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
2,877,562	-				-0.2
2,877,601	+				-1.3
2,877,601	+				-0.2
2,877,601	+				+2.0
2,877,602	-				-1.0
2,878,111	+		LRK53_RS13015	0.81	-1.1
2,878,111	+		LRK53_RS13015	0.81	+1.0
2,878,111	+		LRK53_RS13015	0.81	-0.6
2,878,111	+		LRK53_RS13015	0.81	-0.8
2,878,111	+		LRK53_RS13015	0.81	+1.0
2,878,111	+		LRK53_RS13015	0.81	+0.6
2,878,111	+		LRK53_RS13015	0.81	+2.6
2,878,111	+		LRK53_RS13015	0.81	+1.0
2,878,111	+		LRK53_RS13015	0.81	-1.0
2,878,111	+		LRK53_RS13015	0.81	+1.0
2,878,111	+		LRK53_RS13015	0.81	+0.7
2,878,111	+		LRK53_RS13015	0.81	-0.0
2,878,111	+		LRK53_RS13015	0.81	-0.6
2,878,111	+		LRK53_RS13015	0.81	-0.3
2,878,112	-		LRK53_RS13015	0.81	+0.3
2,878,112	-		LRK53_RS13015	0.81	-0.6
2,878,112	-		LRK53_RS13015	0.81	+1.0
2,878,112	-		LRK53_RS13015	0.81	-0.6
2,878,112	-		LRK53_RS13015	0.81	+1.0
2,878,112	-		LRK53_RS13015	0.81	-1.0
2,878,112	-		LRK53_RS13015	0.81	-1.6
2,878,112	-		LRK53_RS13015	0.81	-0.3
2,878,112	-		LRK53_RS13015	0.81	-0.0
2,878,112	-		LRK53_RS13015	0.81	-0.3
2,878,112	-		LRK53_RS13015	0.81	-1.6
2,878,112	-		LRK53_RS13015	0.81	-1.1
2,878,112	-		LRK53_RS13015	0.81	+0.4
2,878,112	-		LRK53_RS13015	0.81	+0.2
2,878,129	+		LRK53_RS13015	0.86	-0.4
2,878,129	+		LRK53_RS13015	0.86	+2.0
2,878,129	+		LRK53_RS13015	0.86	-0.0
2,878,129	+		LRK53_RS13015	0.86	-0.6
2,878,130	-		LRK53_RS13015	0.87	-0.6
2,878,130	-		LRK53_RS13015	0.87	-1.8
2,878,130	-		LRK53_RS13015	0.87	+1.0
2,878,130	-		LRK53_RS13015	0.87	-0.2
2,878,213	+				+1.0
2,878,213	+				+0.2
2,878,213	+				-1.0
2,878,213	+				-0.5
2,878,213	+				-0.2
2,878,213	+				-1.2
2,878,214	-				+1.0
2,878,214	-				-0.0
2,878,214	-				-0.4
2,878,214	-				-1.5
2,878,215	+				+0.4
2,878,215	+				-1.6
2,878,215	+				+1.0
2,878,215	+				+0.7
2,878,215	+				+0.2
2,878,215	+				-0.0
2,878,215	+				+0.4
2,878,215	+				-1.3
2,878,215	+				-1.1
2,878,215	+				-0.6
2,878,215	+				+1.0
2,878,215	+				+1.0
2,878,215	+				-0.0
2,878,215	+				-0.6
2,878,215	+				-2.5
2,878,216	-				-1.3
2,878,216	-				-0.7
2,878,216	-				-1.8
2,878,216	-				+0.4
2,878,314	-				-1.6
2,878,344	+				-1.3
2,878,344	+				-1.0
2,878,344	+				-1.2
2,878,344	+				-0.3
2,878,344	+				-0.8
2,878,344	+				+0.1
2,878,344	+				-1.5
2,878,344	+				-1.3
2,878,344	+				-0.0
2,878,344	+				-0.8
2,878,344	+				+0.6
2,878,345	-				-0.6
2,878,345	-				-0.4
2,878,345	-				-0.2
2,878,345	-				-1.1
2,878,345	-				-0.0
2,878,345	-				-1.7
2,878,345	-				-1.1
2,878,345	-				-0.8
2,878,345	-				-1.0
2,878,345	-				+2.0
2,878,354	+				-0.8
2,878,354	+				-1.0
2,878,354	+				+0.6
2,878,354	+				-0.3
2,878,354	+				-1.8
2,878,354	+				-1.0
2,878,354	+				+1.6
2,878,355	-				+0.4
2,878,355	-				+1.6
2,878,355	-				-0.8
2,878,355	-				-0.5
2,878,355	-				-1.0
2,878,361	+				+1.0
2,878,362	-				+0.4
2,878,362	-				-1.6
2,878,511	+		LRK53_RS13020	0.29	+1.0
2,878,511	+		LRK53_RS13020	0.29	-2.0
2,878,609	+		LRK53_RS13020	0.47	-1.0
2,878,610	-		LRK53_RS13020	0.47	-1.0
2,878,945	+				-0.8
2,878,946	-				-1.3
2,879,201	-		LRK53_RS13025	0.26	-0.8
2,879,201	-		LRK53_RS13025	0.26	-0.6
2,879,201	-		LRK53_RS13025	0.26	-1.1
2,879,201	-		LRK53_RS13025	0.26	-1.6
2,879,201	-		LRK53_RS13025	0.26	-1.3
2,879,201	-		LRK53_RS13025	0.26	+1.0
2,879,201	-		LRK53_RS13025	0.26	-1.6
2,879,219	+		LRK53_RS13025	0.28	-0.4
2,879,220	-		LRK53_RS13025	0.28	+1.0
2,879,312	+		LRK53_RS13025	0.38	+0.3
2,879,312	+		LRK53_RS13025	0.38	-0.6
2,879,313	-		LRK53_RS13025	0.38	-0.0
2,879,313	-		LRK53_RS13025	0.38	-0.0
2,879,602	-		LRK53_RS13025	0.68	+0.4
2,879,730	-		LRK53_RS13025	0.81	-1.6
2,879,730	-		LRK53_RS13025	0.81	-0.8
2,879,792	+		LRK53_RS13025	0.87	+2.0
2,879,834	+				-0.6
2,879,834	+				-0.3
2,879,834	+				-0.0
2,879,834	+				+0.7
2,879,834	+				+2.3
2,879,834	+				+0.4
2,879,835	-				+1.0
2,879,835	-				+1.0
2,879,835	-				-0.6
2,879,835	-				-0.0
2,879,835	-				-0.0
2,879,835	-				+1.0
2,879,835	-				-1.0