Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12870

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
2,843,866	+				-1.0
2,843,866	+				-0.7
2,843,867	-				+1.0
2,843,867	-				-0.6
2,843,867	-				-0.9
2,843,867	-				-2.2
2,843,867	-				+1.0
2,843,891	+				-0.9
2,843,891	+				-0.0
2,843,891	+				-1.6
2,843,891	+				+1.0
2,843,891	+				-0.1
2,843,891	+				-1.0
2,843,891	+				-0.2
2,843,891	+				-1.8
2,843,891	+				-0.7
2,843,891	+				+0.6
2,843,891	+				-1.3
2,843,891	+				-1.0
2,843,891	+				-0.9
2,843,891	+				-2.3
2,843,891	+				-0.2
2,843,891	+				+0.4
2,843,892	-				-0.0
2,843,892	-				-0.9
2,843,892	-				-1.5
2,843,892	-				+0.2
2,843,892	-				-0.0
2,843,892	-				-0.3
2,843,892	-				-1.6
2,843,892	-				-1.6
2,843,892	-				+0.3
2,843,892	-				+0.4
2,843,892	-				-0.3
2,844,101	+		LRK53_RS12865	0.19	-0.3
2,844,101	+		LRK53_RS12865	0.19	-0.0
2,844,101	+		LRK53_RS12865	0.19	+0.7
2,844,101	+		LRK53_RS12865	0.19	-0.9
2,844,102	-		LRK53_RS12865	0.19	-0.0
2,844,102	-		LRK53_RS12865	0.19	-0.6
2,844,102	-		LRK53_RS12865	0.19	-0.2
2,844,284	+		LRK53_RS12865	0.40	-0.6
2,844,284	+		LRK53_RS12865	0.40	-0.6
2,844,284	+		LRK53_RS12865	0.40	+1.0
2,844,284	+		LRK53_RS12865	0.40	-1.0
2,844,284	+		LRK53_RS12865	0.40	-1.5
2,844,284	+		LRK53_RS12865	0.40	-1.3
2,844,285	-		LRK53_RS12865	0.40	-0.7
2,844,285	-		LRK53_RS12865	0.40	-1.7
2,844,356	+		LRK53_RS12865	0.48	-0.8
2,844,356	+		LRK53_RS12865	0.48	-0.8
2,844,356	+		LRK53_RS12865	0.48	-0.9
2,844,357	-		LRK53_RS12865	0.48	-1.0
2,844,357	-		LRK53_RS12865	0.48	+0.1
2,844,357	-		LRK53_RS12865	0.48	-2.0
2,844,458	+		LRK53_RS12865	0.60	-0.6
2,844,458	+		LRK53_RS12865	0.60	+1.0
2,844,458	+		LRK53_RS12865	0.60	-0.4
2,844,458	+		LRK53_RS12865	0.60	-0.4
2,844,458	+		LRK53_RS12865	0.60	-1.0
2,844,458	+		LRK53_RS12865	0.60	-1.3
2,844,458	+		LRK53_RS12865	0.60	+2.0
2,844,459	-		LRK53_RS12865	0.60	-0.7
2,844,464	+		LRK53_RS12865	0.61	-0.8
2,844,464	+		LRK53_RS12865	0.61	-1.6
2,844,464	+		LRK53_RS12865	0.61	+0.2
2,844,465	-		LRK53_RS12865	0.61	+0.3
2,844,503	+		LRK53_RS12865	0.66	-0.6
2,844,503	+		LRK53_RS12865	0.66	+0.6
2,844,503	+		LRK53_RS12865	0.66	-0.0
2,844,503	+		LRK53_RS12865	0.66	+1.6
2,844,503	+		LRK53_RS12865	0.66	+1.0
2,844,504	-		LRK53_RS12865	0.66	-1.0
2,844,504	-		LRK53_RS12865	0.66	+1.0
2,844,504	-		LRK53_RS12865	0.66	+0.2
2,844,504	-		LRK53_RS12865	0.66	+1.0
2,844,620	+		LRK53_RS12865	0.79	-0.9
2,844,620	+		LRK53_RS12865	0.79	+1.4
2,844,621	-		LRK53_RS12865	0.79	+0.7
2,844,621	-		LRK53_RS12865	0.79	-1.0
2,844,662	+		LRK53_RS12865	0.84	-0.3
2,844,662	+		LRK53_RS12865	0.84	-0.0
2,844,662	+		LRK53_RS12865	0.84	+0.6
2,844,662	+		LRK53_RS12865	0.84	+2.0
2,844,662	+		LRK53_RS12865	0.84	-0.3
2,844,662	+		LRK53_RS12865	0.84	-0.6
2,844,663	-		LRK53_RS12865	0.84	-2.0
2,844,663	-		LRK53_RS12865	0.84	+1.6
2,844,663	-		LRK53_RS12865	0.84	-1.6
2,844,663	-		LRK53_RS12865	0.84	+1.0
2,844,663	-		LRK53_RS12865	0.84	+1.0
2,844,663	-		LRK53_RS12865	0.84	-0.2
2,844,663	-		LRK53_RS12865	0.84	-0.6
2,844,663	-		LRK53_RS12865	0.84	-0.0
2,844,663	-		LRK53_RS12865	0.84	-1.3
2,844,704	+		LRK53_RS12865	0.89	-0.0
2,844,705	-		LRK53_RS12865	0.89	-1.6
2,844,705	-		LRK53_RS12865	0.89	+1.0
2,844,833	+				+0.4
2,844,834	-				-2.6
2,844,928	+				+1.0
2,844,928	+				-0.7
2,844,928	+				+0.2
2,844,929	-				+1.0
2,844,929	-				-0.0
2,844,929	-				+0.5
2,844,929	-				-0.6
2,844,929	-				+1.0
2,844,929	-				+0.6
2,844,929	-				+1.6
2,844,929	-				+1.4
2,844,929	-				+1.0
2,845,067	+		LRK53_RS12870	0.23	-0.8
2,845,067	+		LRK53_RS12870	0.23	-0.5
2,845,067	+		LRK53_RS12870	0.23	+0.2
2,845,067	+		LRK53_RS12870	0.23	-1.6
2,845,068	-		LRK53_RS12870	0.23	-0.6
2,845,068	-		LRK53_RS12870	0.23	-0.6
2,845,211	+		LRK53_RS12870	0.37	-0.0
2,845,254	-		LRK53_RS12870	0.41	-0.0
2,845,307	+		LRK53_RS12870	0.47	+0.4
2,845,434	-		LRK53_RS12870	0.59	+1.0
2,845,434	-		LRK53_RS12870	0.59	-1.4
2,845,958	+				-0.9
2,845,958	+				-0.7
2,845,958	+				+1.0
2,845,958	+				+2.0
2,845,958	+				-0.3
2,845,959	-				+0.1
2,845,959	-				+3.0
2,845,959	-				-0.9
2,845,959	-				-1.5
2,845,959	-				-1.2
2,846,121	+				-1.6
2,846,121	+				-0.8
2,846,121	+				+0.4
2,846,122	-				-2.0
2,846,122	-				-0.8
2,846,122	-				+0.4
2,846,122	-				+0.4
2,846,149	-				-1.0
2,846,172	+				-1.0
2,846,618	+		LRK53_RS12875	0.38	-0.6
2,846,618	+		LRK53_RS12875	0.38	-2.2
2,846,691	+		LRK53_RS12875	0.45	-0.4
2,846,843	+		LRK53_RS12875	0.61	-1.3
2,846,843	+		LRK53_RS12875	0.61	-1.0
2,846,844	-		LRK53_RS12875	0.61	-1.1
2,846,844	-		LRK53_RS12875	0.61	-1.6
2,846,844	-		LRK53_RS12875	0.61	-0.0