Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12280

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
2,723,999	-				-0.8
2,724,031	+				+0.2
2,724,031	+				-0.2
2,724,031	+				+0.7
2,724,031	+				+1.0
2,724,031	+				-0.8
2,724,031	+				-0.7
2,724,031	+				-0.0
2,724,031	+				-0.8
2,724,031	+				-0.0
2,724,031	+				-1.0
2,724,031	+				-0.2
2,724,031	+				-0.6
2,724,031	+				-1.6
2,724,031	+				-0.8
2,724,031	+				+0.7
2,724,031	+				-0.8
2,724,031	+				-1.3
2,724,031	+				-0.3
2,724,031	+				-0.0
2,724,031	+				-0.0
2,724,031	+				-1.6
2,724,032	-				-0.6
2,724,032	-				-1.7
2,724,032	-				-1.8
2,724,032	-				-1.2
2,724,032	-				-0.0
2,724,265	+		LRK53_RS12275	0.41	-2.2
2,724,265	+		LRK53_RS12275	0.41	+0.1
2,724,265	+		LRK53_RS12275	0.41	-1.0
2,724,265	+		LRK53_RS12275	0.41	-0.6
2,724,265	+		LRK53_RS12275	0.41	-1.0
2,724,266	-		LRK53_RS12275	0.41	-0.3
2,724,266	-		LRK53_RS12275	0.41	+0.4
2,724,586	+				-0.8
2,724,586	+				-0.6
2,724,586	+				-1.9
2,724,587	-				-0.8
2,724,587	-				-1.3
2,724,587	-				-0.0
2,724,587	-				+0.2
2,724,621	+				+2.0
2,724,621	+				-0.3
2,724,622	-				-2.4
2,724,622	-				-0.5
2,724,622	-				-0.3
2,724,622	-				-1.0
2,724,622	-				-0.8
2,724,743	+				+0.2
2,724,743	+				-1.8
2,724,743	+				-0.8
2,724,743	+				-0.9
2,724,743	+				+0.6
2,724,743	+				-2.0
2,724,743	+				+0.4
2,724,743	+				-0.6
2,724,743	+				-0.0
2,724,743	+				-0.4
2,724,743	+				+0.4
2,724,743	+				-0.1
2,724,743	+				+0.4
2,724,743	+				+1.6
2,724,743	+				-0.0
2,724,743	+				+0.7
2,724,743	+				-0.8
2,724,743	+				-0.0
2,724,743	+				-0.0
2,724,743	+				+2.0
2,724,743	+				+0.1
2,724,743	+				-0.4
2,724,743	+				+2.6
2,724,743	+				-1.6
2,724,743	+				-0.0
2,724,743	+				+0.1
2,724,744	-				+1.0
2,724,744	-				+0.6
2,724,744	-				-1.9
2,724,744	-				-1.1
2,724,744	-				-0.0
2,724,744	-				-0.3
2,724,744	-				-1.0
2,724,744	-				+1.0
2,724,744	-				+0.2
2,724,744	-				+1.6
2,724,744	-				-0.6
2,724,782	+				+1.4
2,724,782	+				+0.8
2,724,782	+				-0.0
2,724,782	+				-1.3
2,724,782	+				+0.6
2,724,782	+				+3.0
2,724,782	+				-0.2
2,724,782	+				-0.0
2,724,782	+				-0.4
2,724,782	+				+0.1
2,724,783	-				-0.6
2,724,783	-				-0.2
2,724,783	-				-1.0
2,724,783	-				+1.0
2,724,783	-				-1.6
2,724,783	-				-0.6
2,724,783	-				-1.6
2,725,283	+		LRK53_RS12280	0.54	-1.7
2,725,283	+		LRK53_RS12280	0.54	-0.0
2,725,284	-		LRK53_RS12280	0.54	-0.3
2,725,284	-		LRK53_RS12280	0.54	-0.2
2,725,284	-		LRK53_RS12280	0.54	-0.3
2,725,284	-		LRK53_RS12280	0.54	-1.8
2,725,284	-		LRK53_RS12280	0.54	-0.0
2,725,736	+				+1.0
2,725,736	+				-1.0
2,725,736	+				-1.0
2,725,737	-				-0.0
2,725,737	-				+2.6
2,725,761	+				+2.6
2,725,761	+				-1.3
2,725,762	-				-1.1
2,725,762	-				+1.0
2,725,762	-				-1.1
2,725,769	+				-1.6
2,725,923	+				+0.1
2,725,923	+				+1.0
2,725,930	+				+0.2
2,725,930	+				+1.0
2,725,930	+				-0.8
2,725,930	+				-1.3
2,725,930	+				+0.7
2,725,930	+				-1.1
2,725,930	+				-0.3
2,725,930	+				+0.7
2,725,930	+				-1.6
2,725,930	+				+0.1
2,725,930	+				-0.9
2,725,930	+				-0.2
2,725,930	+				-0.0
2,725,930	+				+0.2
2,725,930	+				-1.3
2,725,930	+				-1.3
2,725,931	-				-0.8
2,725,931	-				+0.4
2,725,931	-				-2.3
2,725,931	-				-0.6
2,725,931	-				-0.3
2,725,931	-				-0.0
2,725,931	-				-0.9
2,725,931	-				-0.4
2,725,931	-				+0.2
2,725,931	-				-1.2
2,725,931	-				-0.3
2,725,931	-				-0.3
2,725,931	-				+0.4
2,725,931	-				-0.9
2,725,931	-				-0.3
2,725,931	-				-1.3
2,725,931	-				-0.4
2,725,931	-				-0.5
2,725,931	-				-1.8
2,725,931	-				+0.2
2,725,931	-				-0.7
2,726,134	+		LRK53_RS12285	0.15	-1.0
2,726,134	+		LRK53_RS12285	0.15	+2.0
2,726,135	-		LRK53_RS12285	0.15	+0.4
2,726,600	-		LRK53_RS12285	0.48	+1.2
2,726,600	-		LRK53_RS12285	0.48	-0.2
2,726,626	+		LRK53_RS12285	0.50	-0.0
2,726,626	+		LRK53_RS12285	0.50	+0.6
2,726,627	-		LRK53_RS12285	0.50	+0.7
2,726,627	-		LRK53_RS12285	0.50	-1.1