Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11230

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
2,506,133	+		LRK53_RS11225	0.85	-0.6
2,506,134	-		LRK53_RS11225	0.85	-0.6
2,506,134	-		LRK53_RS11225	0.85	+1.0
2,506,134	-		LRK53_RS11225	0.85	-0.0
2,506,134	-		LRK53_RS11225	0.85	+1.4
2,506,214	+				-0.6
2,506,215	-				-1.5
2,506,215	-				-0.4
2,506,215	-				+1.0
2,506,215	-				-0.3
2,506,220	+				+1.2
2,506,220	+				+1.0
2,506,220	+				-0.6
2,506,220	+				-1.4
2,506,220	+				+1.0
2,506,220	+				-0.0
2,506,221	-				+0.1
2,506,221	-				-2.0
2,506,221	-				+0.5
2,506,221	-				-0.0
2,506,221	-				+0.5
2,506,435	+				-1.6
2,506,435	+				+1.0
2,506,435	+				+0.5
2,506,435	+				-0.0
2,506,436	-				-0.9
2,506,436	-				+1.0
2,506,436	-				+0.5
2,506,436	-				-1.1
2,506,460	+				-0.9
2,506,604	+				+1.0
2,506,604	+				-1.6
2,506,604	+				-0.0
2,506,604	+				+1.0
2,506,605	-				-0.9
2,506,605	-				-1.5
2,506,605	-				-0.6
2,506,605	-				-1.0
2,506,605	-				-1.1
2,506,605	-				+2.0
2,506,605	-				-1.6
2,506,605	-				-0.6
2,506,605	-				-0.0
2,506,605	-				-0.0
2,506,605	-				-0.4
2,506,605	-				+0.2
2,506,748	+				-0.0
2,506,748	+				-0.8
2,506,748	+				-1.6
2,506,769	+				+0.4
2,506,769	+				-1.5
2,506,769	+				+2.5
2,506,769	+				+0.4
2,506,770	-				-0.7
2,506,770	-				-1.2
2,506,770	-				+1.5
2,506,871	+				-1.6
2,506,871	+				+1.5
2,506,871	+				-2.1
2,506,925	+				-0.2
2,506,925	+				+0.2
2,506,926	-				+0.4
2,506,926	-				-0.0
2,506,926	-				-0.6
2,507,024	+				-0.6
2,507,024	+				-0.0
2,507,024	+				-1.6
2,507,024	+				+2.0
2,507,024	+				-0.2
2,507,024	+				-1.7
2,507,024	+				-0.4
2,507,025	-				-2.0
2,507,025	-				-0.0
2,507,025	-				-0.4
2,507,025	-				-1.0
2,507,025	-				-0.0
2,507,025	-				-1.6
2,507,025	-				+1.0
2,507,027	+				+1.0
2,507,027	+				+1.0
2,507,027	+				-1.9
2,507,027	+				-1.3
2,507,027	+				-0.0
2,507,027	+				-2.4
2,507,027	+				+1.0
2,507,027	+				-0.0
2,507,028	-				-0.5
2,507,028	-				-0.6
2,507,028	-				-0.4
2,507,028	-				-0.4
2,507,028	-				-0.3
2,507,028	-				-0.0
2,507,028	-				-1.0
2,507,028	-				+1.0
2,507,102	+				-1.1
2,507,102	+				-0.4
2,507,102	+				-0.4
2,507,102	+				-1.0
2,507,102	+				+0.5
2,507,102	+				+1.0
2,507,103	-				-1.0
2,507,103	-				-1.6
2,507,103	-				-0.3
2,507,103	-				-1.3
2,507,103	-				-0.9
2,507,103	-				-1.4
2,507,103	-				+0.4
2,507,397	+		LRK53_RS11230	0.29	-0.6
2,507,397	+		LRK53_RS11230	0.29	+0.6
2,507,397	+		LRK53_RS11230	0.29	-0.0
2,507,397	+		LRK53_RS11230	0.29	-0.9
2,507,398	-		LRK53_RS11230	0.29	-1.2
2,507,398	-		LRK53_RS11230	0.29	-0.4
2,507,523	+		LRK53_RS11230	0.41	-1.4
2,507,523	+		LRK53_RS11230	0.41	-0.8
2,507,524	-		LRK53_RS11230	0.41	+1.0
2,507,524	-		LRK53_RS11230	0.41	-0.0
2,507,727	+		LRK53_RS11230	0.59	-1.8
2,507,728	-		LRK53_RS11230	0.59	+0.5
2,507,805	+		LRK53_RS11230	0.66	-0.0
2,507,934	+		LRK53_RS11230	0.78	+0.4
2,507,934	+		LRK53_RS11230	0.78	-1.3
2,507,934	+		LRK53_RS11230	0.78	-1.9
2,507,945	+		LRK53_RS11230	0.78	-1.7
2,507,945	+		LRK53_RS11230	0.78	+1.0
2,507,945	+		LRK53_RS11230	0.78	+1.0
2,507,946	-		LRK53_RS11230	0.79	-1.4
2,507,946	-		LRK53_RS11230	0.79	-0.0
2,507,946	-		LRK53_RS11230	0.79	+2.0
2,507,946	-		LRK53_RS11230	0.79	-1.4
2,507,962	+		LRK53_RS11230	0.80	-0.0
2,507,962	+		LRK53_RS11230	0.80	-1.1
2,507,963	-		LRK53_RS11230	0.80	-0.0
2,507,963	-		LRK53_RS11230	0.80	-1.0
2,507,963	-		LRK53_RS11230	0.80	-0.0
2,507,963	-		LRK53_RS11230	0.80	+1.0
2,508,049	+		LRK53_RS11230	0.88	+1.0
2,508,300	+				-1.9
2,508,300	+				-0.3
2,508,300	+				-0.4
2,508,300	+				-0.0
2,508,301	-				-2.0
2,508,367	+				+0.5
2,508,367	+				-0.6
2,508,367	+				-0.4
2,508,367	+				-1.2
2,508,368	-				-0.4
2,508,368	-				-1.4
2,508,397	+				-1.9
2,508,398	-				-0.6
2,508,398	-				-0.0
2,508,454	+				-1.7
2,508,454	+				+1.0
2,508,454	+				+3.5
2,508,454	+				+0.2
2,508,454	+				-0.0
2,508,455	-				-0.0
2,508,587	+		LRK53_RS11235	0.11	+1.0
2,508,587	+		LRK53_RS11235	0.11	-0.0
2,508,587	+		LRK53_RS11235	0.11	-0.4
2,508,587	+		LRK53_RS11235	0.11	-0.6
2,508,587	+		LRK53_RS11235	0.11	-1.2
2,508,587	+		LRK53_RS11235	0.11	-0.9
2,508,587	+		LRK53_RS11235	0.11	-2.0
2,508,588	-		LRK53_RS11235	0.11	-2.7
2,508,644	+		LRK53_RS11235	0.15	-1.4
2,508,644	+		LRK53_RS11235	0.15	+0.2
2,508,644	+		LRK53_RS11235	0.15	-0.6
2,508,644	+		LRK53_RS11235	0.15	-0.6
2,508,644	+		LRK53_RS11235	0.15	+1.0
2,508,644	+		LRK53_RS11235	0.15	-1.0
2,508,645	-		LRK53_RS11235	0.15	-0.0
2,508,645	-		LRK53_RS11235	0.15	-1.2
2,508,645	-		LRK53_RS11235	0.15	+1.0
2,508,710	-		LRK53_RS11235	0.19	-1.2
2,508,824	+		LRK53_RS11235	0.26	-0.6
2,508,824	+		LRK53_RS11235	0.26	-1.6
2,508,824	+		LRK53_RS11235	0.26	+2.0
2,508,824	+		LRK53_RS11235	0.26	-0.0
2,508,824	+		LRK53_RS11235	0.26	-0.0
2,508,824	+		LRK53_RS11235	0.26	-1.4
2,508,824	+		LRK53_RS11235	0.26	-0.0
2,508,824	+		LRK53_RS11235	0.26	-0.8
2,508,824	+		LRK53_RS11235	0.26	+2.0
2,508,824	+		LRK53_RS11235	0.26	+1.5
2,508,824	+		LRK53_RS11235	0.26	-1.0
2,508,824	+		LRK53_RS11235	0.26	-0.0
2,508,824	+		LRK53_RS11235	0.26	+1.0
2,508,824	+		LRK53_RS11235	0.26	-0.6
2,508,825	-		LRK53_RS11235	0.26	-0.2
2,508,825	-		LRK53_RS11235	0.26	+1.0
2,508,825	-		LRK53_RS11235	0.26	+2.5
2,508,825	-		LRK53_RS11235	0.26	-0.4
2,508,825	-		LRK53_RS11235	0.26	+2.0
2,508,825	-		LRK53_RS11235	0.26	-1.0
2,508,825	-		LRK53_RS11235	0.26	-0.0
2,508,825	-		LRK53_RS11235	0.26	-0.7
2,508,825	-		LRK53_RS11235	0.26	+0.3
2,508,825	-		LRK53_RS11235	0.26	+1.4
2,508,825	-		LRK53_RS11235	0.26	-0.0
2,508,842	+		LRK53_RS11235	0.27	-1.6
2,508,842	+		LRK53_RS11235	0.27	-0.7
2,508,842	+		LRK53_RS11235	0.27	-1.2
2,508,842	+		LRK53_RS11235	0.27	-0.6
2,508,842	+		LRK53_RS11235	0.27	-0.8
2,508,842	+		LRK53_RS11235	0.27	-0.0
2,508,843	-		LRK53_RS11235	0.27	-1.0
2,508,843	-		LRK53_RS11235	0.27	-0.0
2,508,843	-		LRK53_RS11235	0.27	-0.2
2,508,843	-		LRK53_RS11235	0.27	-0.7
2,508,843	-		LRK53_RS11235	0.27	+1.5
2,508,843	-		LRK53_RS11235	0.27	-1.5
2,508,863	+		LRK53_RS11235	0.28	-0.2
2,508,863	+		LRK53_RS11235	0.28	-0.6
2,508,863	+		LRK53_RS11235	0.28	-1.0
2,508,863	+		LRK53_RS11235	0.28	-0.3
2,508,864	-		LRK53_RS11235	0.29	-0.4
2,508,864	-		LRK53_RS11235	0.29	+0.4
2,508,899	+		LRK53_RS11235	0.31	-0.8
2,508,899	+		LRK53_RS11235	0.31	-0.0
2,508,899	+		LRK53_RS11235	0.31	-0.6
2,508,899	+		LRK53_RS11235	0.31	-1.4
2,508,899	+		LRK53_RS11235	0.31	-1.0
2,508,899	+		LRK53_RS11235	0.31	+0.4
2,508,899	+		LRK53_RS11235	0.31	+1.0
2,508,900	-		LRK53_RS11235	0.31	-0.9
2,508,900	-		LRK53_RS11235	0.31	-0.0
2,508,900	-		LRK53_RS11235	0.31	-0.3
2,508,900	-		LRK53_RS11235	0.31	+1.0
2,508,900	-		LRK53_RS11235	0.31	+0.5
2,508,900	-		LRK53_RS11235	0.31	-1.0
2,508,900	-		LRK53_RS11235	0.31	-0.6
2,508,900	-		LRK53_RS11235	0.31	-0.7
2,508,900	-		LRK53_RS11235	0.31	-0.9
2,508,900	-		LRK53_RS11235	0.31	-0.6
2,508,900	-		LRK53_RS11235	0.31	-0.0
2,508,900	-		LRK53_RS11235	0.31	-1.4
2,508,974	+		LRK53_RS11235	0.36	-1.4
2,509,055	+		LRK53_RS11235	0.41	-2.2
2,509,103	+		LRK53_RS11235	0.44	+0.6
2,509,103	+		LRK53_RS11235	0.44	-1.0
2,509,104	-		LRK53_RS11235	0.44	-0.7