Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08515

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
1,909,575	-				-0.6
1,909,575	-				-0.3
1,909,575	-				-1.7
1,909,575	-				-1.2
1,909,575	-				-0.5
1,909,575	-				-2.7
1,909,575	-				+0.4
1,909,686	+		LRK53_RS08510	0.15	+0.3
1,909,686	+		LRK53_RS08510	0.15	+0.6
1,909,686	+		LRK53_RS08510	0.15	-0.8
1,909,686	+		LRK53_RS08510	0.15	-0.6
1,909,686	+		LRK53_RS08510	0.15	+0.4
1,909,686	+		LRK53_RS08510	0.15	-0.6
1,909,686	+		LRK53_RS08510	0.15	-2.0
1,909,686	+		LRK53_RS08510	0.15	+0.1
1,909,686	+		LRK53_RS08510	0.15	-1.6
1,909,686	+		LRK53_RS08510	0.15	-0.4
1,909,686	+		LRK53_RS08510	0.15	-0.6
1,909,686	+		LRK53_RS08510	0.15	+2.0
1,909,686	+		LRK53_RS08510	0.15	-1.3
1,909,686	+		LRK53_RS08510	0.15	-0.6
1,909,686	+		LRK53_RS08510	0.15	-0.8
1,909,686	+		LRK53_RS08510	0.15	-1.3
1,909,686	+		LRK53_RS08510	0.15	-0.3
1,909,687	-		LRK53_RS08510	0.16	-1.2
1,909,687	-		LRK53_RS08510	0.16	-0.5
1,909,687	-		LRK53_RS08510	0.16	-1.0
1,909,687	-		LRK53_RS08510	0.16	-0.6
1,909,687	-		LRK53_RS08510	0.16	-1.0
1,909,687	-		LRK53_RS08510	0.16	+0.4
1,909,687	-		LRK53_RS08510	0.16	-0.3
1,909,687	-		LRK53_RS08510	0.16	-0.3
1,909,687	-		LRK53_RS08510	0.16	+1.5
1,909,687	-		LRK53_RS08510	0.16	-1.5
1,909,687	-		LRK53_RS08510	0.16	-0.0
1,909,687	-		LRK53_RS08510	0.16	-0.1
1,909,687	-		LRK53_RS08510	0.16	-1.0
1,909,687	-		LRK53_RS08510	0.16	-1.0
1,909,687	-		LRK53_RS08510	0.16	-0.2
1,909,687	-		LRK53_RS08510	0.16	-1.8
1,909,687	-		LRK53_RS08510	0.16	+2.6
1,909,687	-		LRK53_RS08510	0.16	-0.5
1,909,687	-		LRK53_RS08510	0.16	-0.0
1,909,687	-		LRK53_RS08510	0.16	-2.7
1,909,687	-		LRK53_RS08510	0.16	-0.0
1,909,687	-		LRK53_RS08510	0.16	-1.0
1,909,687	-		LRK53_RS08510	0.16	+1.0
1,909,710	+		LRK53_RS08510	0.19	-0.6
1,909,710	+		LRK53_RS08510	0.19	-0.4
1,909,710	+		LRK53_RS08510	0.19	-1.8
1,909,710	+		LRK53_RS08510	0.19	+1.0
1,909,710	+		LRK53_RS08510	0.19	+2.6
1,909,710	+		LRK53_RS08510	0.19	-0.5
1,909,711	-		LRK53_RS08510	0.19	-0.7
1,909,711	-		LRK53_RS08510	0.19	+1.4
1,909,711	-		LRK53_RS08510	0.19	-0.4
1,909,711	-		LRK53_RS08510	0.19	+1.0
1,909,711	-		LRK53_RS08510	0.19	-0.2
1,909,711	-		LRK53_RS08510	0.19	-0.2
1,909,825	-		LRK53_RS08510	0.37	+0.1
1,909,956	+		LRK53_RS08510	0.57	-0.3
1,909,956	+		LRK53_RS08510	0.57	+1.0
1,909,956	+		LRK53_RS08510	0.57	-0.7
1,909,956	+		LRK53_RS08510	0.57	+0.3
1,909,957	-		LRK53_RS08510	0.57	-1.0
1,909,957	-		LRK53_RS08510	0.57	-2.5
1,909,957	-		LRK53_RS08510	0.57	+1.4
1,909,957	-		LRK53_RS08510	0.57	-1.3
1,909,957	-		LRK53_RS08510	0.57	-1.3
1,909,957	-		LRK53_RS08510	0.57	-0.7
1,909,957	-		LRK53_RS08510	0.57	-0.9
1,909,957	-		LRK53_RS08510	0.57	+1.0
1,909,957	-		LRK53_RS08510	0.57	+0.3
1,910,266	+				-0.6
1,910,266	+				-1.8
1,910,266	+				-1.0
1,910,266	+				-2.3
1,910,266	+				-1.8
1,910,266	+				-0.5
1,910,266	+				+0.4
1,910,267	-				+0.4
1,910,267	-				-1.0
1,910,267	-				-0.0
1,910,267	-				-0.6
1,910,267	-				+0.4
1,910,267	-				-0.8
1,910,267	-				+0.2
1,910,267	-				-0.4
1,910,268	+				-2.9
1,910,268	+				+1.0
1,910,268	+				-0.6
1,910,268	+				-0.5
1,910,268	+				-1.0
1,910,268	+				-2.8
1,910,268	+				+1.0
1,910,268	+				-1.2
1,910,268	+				+0.7
1,910,268	+				-0.0
1,910,268	+				-0.0
1,910,268	+				-0.1
1,910,268	+				-1.6
1,910,268	+				-0.4
1,910,268	+				-0.8
1,910,269	-				+0.7
1,910,269	-				-0.0
1,910,269	-				-0.7
1,910,269	-				-1.2
1,910,269	-				+0.2
1,910,296	+				-1.1
1,910,297	-				-2.0
1,910,343	+				-1.0
1,910,343	+				-1.6
1,910,343	+				-2.2
1,910,344	-				+0.4
1,910,344	-				-1.0
1,910,419	+				-1.3
1,910,419	+				-1.1
1,910,419	+				-1.6
1,910,420	-				+1.0
1,910,420	-				-1.3
1,910,420	-				+0.7
1,910,420	-				+2.0
1,910,561	+		LRK53_RS08515	0.48	-0.6
1,910,561	+		LRK53_RS08515	0.48	+1.0
1,910,562	-		LRK53_RS08515	0.48	-0.0
1,910,562	-		LRK53_RS08515	0.48	-0.6
1,910,562	-		LRK53_RS08515	0.48	-2.0
1,910,633	+		LRK53_RS08515	0.69	-1.8
1,910,633	+		LRK53_RS08515	0.69	-0.6
1,910,633	+		LRK53_RS08515	0.69	-1.0
1,910,633	+		LRK53_RS08515	0.69	-2.8
1,910,633	+		LRK53_RS08515	0.69	-0.8
1,910,633	+		LRK53_RS08515	0.69	-0.0
1,910,633	+		LRK53_RS08515	0.69	-1.2
1,910,633	+		LRK53_RS08515	0.69	-2.0
1,910,633	+		LRK53_RS08515	0.69	-1.0
1,910,633	+		LRK53_RS08515	0.69	-0.3
1,910,633	+		LRK53_RS08515	0.69	+0.1
1,910,633	+		LRK53_RS08515	0.69	-1.2
1,910,633	+		LRK53_RS08515	0.69	+1.4
1,910,633	+		LRK53_RS08515	0.69	-1.0
1,910,633	+		LRK53_RS08515	0.69	+1.0
1,910,634	-		LRK53_RS08515	0.70	+1.0
1,910,634	-		LRK53_RS08515	0.70	-0.8
1,910,634	-		LRK53_RS08515	0.70	-1.0
1,910,634	-		LRK53_RS08515	0.70	-0.0
1,910,634	-		LRK53_RS08515	0.70	-0.0
1,910,634	-		LRK53_RS08515	0.70	+1.0
1,910,634	-		LRK53_RS08515	0.70	+2.0
1,910,634	-		LRK53_RS08515	0.70	-0.6
1,910,634	-		LRK53_RS08515	0.70	-0.9
1,910,634	-		LRK53_RS08515	0.70	+1.0
1,910,634	-		LRK53_RS08515	0.70	+1.0
1,910,634	-		LRK53_RS08515	0.70	-1.2
1,910,756	+				+0.4
1,910,756	+				-1.8
1,910,756	+				+3.0
1,910,756	+				-1.0
1,910,756	+				+0.4
1,910,756	+				-0.0
1,910,756	+				-0.0
1,910,756	+				-2.6
1,910,757	-				+0.3
1,910,757	-				-0.6
1,910,757	-				+2.0
1,910,757	-				-0.0
1,910,757	-				-0.0
1,910,757	-				-1.1
1,910,773	-				-0.3
1,910,773	-				-0.6
1,910,809	+				-1.0
1,910,809	+				-0.0
1,910,809	+				-0.7
1,910,809	+				-3.1
1,910,852	+				-1.3
1,910,852	+				-1.2
1,910,852	+				+1.0
1,910,922	+				-1.0
1,910,922	+				+0.6
1,910,922	+				-0.0
1,910,922	+				-1.6
1,910,922	+				+1.4
1,910,922	+				+0.4
1,910,922	+				-0.6
1,910,922	+				-0.7
1,910,922	+				-1.0
1,910,922	+				+1.0
1,910,922	+				+1.6
1,910,922	+				-0.6
1,910,922	+				-0.2
1,910,922	+				-0.2
1,910,922	+				-0.3
1,910,922	+				-0.6
1,910,922	+				-1.3
1,910,922	+				-1.2
1,910,922	+				-1.3
1,910,922	+				+1.0
1,910,922	+				+0.4
1,910,922	+				-0.3
1,910,922	+				-0.6
1,910,922	+				-0.0
1,910,922	+				-2.7
1,910,922	+				-0.7
1,910,923	-				-0.6
1,910,923	-				+0.3
1,910,923	-				+0.6
1,910,923	-				-2.0
1,910,923	-				-3.0
1,910,923	-				-1.6
1,910,923	-				+1.0
1,910,923	-				-0.6
1,910,923	-				-0.8
1,910,923	-				-0.7
1,910,923	-				+1.0
1,910,923	-				-0.6
1,910,923	-				-0.2
1,910,923	-				+1.0
1,910,923	-				+0.4
1,910,923	-				-1.6
1,910,923	-				+0.6
1,910,923	-				-1.3
1,910,923	-				-0.0
1,910,923	-				-0.5
1,910,923	-				-0.0
1,910,923	-				-1.0
1,910,923	-				+1.0
1,910,923	-				-2.3
1,910,925	+				-0.6
1,910,925	+				-0.6
1,910,925	+				+0.3
1,910,926	-				+1.0
1,911,004	+				+0.2
1,911,005	-				-1.5
1,911,039	+				+1.0
1,911,044	-				-0.6
1,911,054	-				-1.4
1,911,054	-				-1.0
1,911,070	-				-1.1
1,911,124	-				-1.3
1,911,183	+				-0.8
1,911,183	+				-0.2
1,911,183	+				+1.0
1,911,183	+				-2.0
1,911,183	+				-1.0
1,911,183	+				-0.2
1,911,183	+				-0.1
1,911,183	+				-0.9
1,911,183	+				-0.1
1,911,184	-				-0.6
1,911,184	-				-0.0
1,911,184	-				-0.5
1,911,184	-				-0.0
1,911,184	-				-0.7
1,911,184	-				-1.0
1,911,184	-				-0.2
1,911,192	+				+0.3
1,911,192	+				-0.0
1,911,192	+				-0.7
1,911,192	+				+2.0
1,911,192	+				+1.4
1,911,192	+				-0.6
1,911,192	+				+0.4
1,911,192	+				-0.0
1,911,192	+				-0.0
1,911,192	+				-1.6
1,911,192	+				-0.3
1,911,192	+				-1.0
1,911,192	+				-0.8
1,911,192	+				+0.1
1,911,193	-				-0.6
1,911,193	-				-1.6
1,911,193	-				-0.0
1,911,193	-				-0.0
1,911,193	-				-2.5
1,911,193	-				-0.2
1,911,193	-				-0.9
1,911,193	-				+1.4
1,911,193	-				-1.7
1,911,193	-				-1.3
1,911,193	-				-0.6
1,911,193	-				-0.7
1,911,240	+				+0.4
1,911,240	+				-1.6
1,911,240	+				-0.3
1,911,240	+				+1.0
1,911,240	+				+0.1
1,911,240	+				-0.1
1,911,240	+				-2.1
1,911,240	+				-0.0
1,911,240	+				+1.0
1,911,240	+				-0.2
1,911,240	+				-0.0
1,911,240	+				-0.3
1,911,240	+				+1.0
1,911,241	-				-0.6
1,911,241	-				-2.0
1,911,241	-				-0.6
1,911,241	-				+1.0
1,911,241	-				-1.3
1,911,241	-				-2.2
1,911,241	-				-0.0
1,911,241	-				-0.3
1,911,343	+		LRK53_RS08520	0.15	-0.3
1,911,343	+		LRK53_RS08520	0.15	-0.4
1,911,475	+		LRK53_RS08520	0.24	-0.4
1,911,475	+		LRK53_RS08520	0.24	-2.3
1,911,475	+		LRK53_RS08520	0.24	-0.2
1,911,475	+		LRK53_RS08520	0.24	-0.7
1,911,475	+		LRK53_RS08520	0.24	-1.0
1,911,475	+		LRK53_RS08520	0.24	+1.0
1,911,475	+		LRK53_RS08520	0.24	-1.0
1,911,476	-		LRK53_RS08520	0.24	-0.9
1,911,476	-		LRK53_RS08520	0.24	-0.8
1,911,476	-		LRK53_RS08520	0.24	-0.6
1,911,476	-		LRK53_RS08520	0.24	-1.2
1,911,476	-		LRK53_RS08520	0.24	+1.0
1,911,476	-		LRK53_RS08520	0.24	-0.6
1,911,476	-		LRK53_RS08520	0.24	-1.3
1,911,518	+		LRK53_RS08520	0.27	-0.6
1,911,518	+		LRK53_RS08520	0.27	-0.6
1,911,518	+		LRK53_RS08520	0.27	-0.8
1,911,518	+		LRK53_RS08520	0.27	-0.6
1,911,518	+		LRK53_RS08520	0.27	-0.2
1,911,518	+		LRK53_RS08520	0.27	-1.7
1,911,518	+		LRK53_RS08520	0.27	-0.0
1,911,518	+		LRK53_RS08520	0.27	+0.7
1,911,518	+		LRK53_RS08520	0.27	-0.0
1,911,518	+		LRK53_RS08520	0.27	-0.3
1,911,519	-		LRK53_RS08520	0.27	-0.2
1,911,519	-		LRK53_RS08520	0.27	+1.0
1,911,519	-		LRK53_RS08520	0.27	-0.0
1,911,519	-		LRK53_RS08520	0.27	+1.6
1,911,519	-		LRK53_RS08520	0.27	-1.3
1,911,519	-		LRK53_RS08520	0.27	-0.9
1,911,519	-		LRK53_RS08520	0.27	-0.6
1,911,519	-		LRK53_RS08520	0.27	-0.9
1,911,519	-		LRK53_RS08520	0.27	-0.0
1,911,519	-		LRK53_RS08520	0.27	-0.0
1,911,519	-		LRK53_RS08520	0.27	-0.8
1,911,519	-		LRK53_RS08520	0.27	+0.1
1,911,702	+		LRK53_RS08520	0.39	-0.5
1,911,702	+		LRK53_RS08520	0.39	-0.7
1,911,702	+		LRK53_RS08520	0.39	-0.6
1,911,702	+		LRK53_RS08520	0.39	+0.1
1,911,702	+		LRK53_RS08520	0.39	-1.0
1,911,702	+		LRK53_RS08520	0.39	+0.7
1,911,702	+		LRK53_RS08520	0.39	-0.8
1,911,702	+		LRK53_RS08520	0.39	-0.5
1,911,702	+		LRK53_RS08520	0.39	-1.2
1,911,702	+		LRK53_RS08520	0.39	-0.0
1,911,702	+		LRK53_RS08520	0.39	-1.0
1,911,702	+		LRK53_RS08520	0.39	+1.6
1,911,702	+		LRK53_RS08520	0.39	-0.6
1,911,702	+		LRK53_RS08520	0.39	-0.2
1,911,702	+		LRK53_RS08520	0.39	-3.2
1,911,702	+		LRK53_RS08520	0.39	+1.4
1,911,703	-		LRK53_RS08520	0.39	-0.4
1,911,703	-		LRK53_RS08520	0.39	-1.8
1,911,703	-		LRK53_RS08520	0.39	-0.5
1,911,703	-		LRK53_RS08520	0.39	-0.0
1,911,703	-		LRK53_RS08520	0.39	-0.5
1,911,703	-		LRK53_RS08520	0.39	-0.0
1,911,703	-		LRK53_RS08520	0.39	-1.0
1,911,703	-		LRK53_RS08520	0.39	-0.4
1,911,703	-		LRK53_RS08520	0.39	-0.0
1,911,703	-		LRK53_RS08520	0.39	-0.6
1,911,703	-		LRK53_RS08520	0.39	-0.1
1,911,703	-		LRK53_RS08520	0.39	-0.4
1,911,703	-		LRK53_RS08520	0.39	+0.4
1,911,703	-		LRK53_RS08520	0.39	-1.3
1,911,703	-		LRK53_RS08520	0.39	-0.4
1,911,703	-		LRK53_RS08520	0.39	-0.6
1,911,703	-		LRK53_RS08520	0.39	-0.6
1,911,703	-		LRK53_RS08520	0.39	-0.4
1,911,703	-		LRK53_RS08520	0.39	-2.1