Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08480

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
1,903,926	+		LRK53_RS08470	0.78	+1.0
1,903,926	+		LRK53_RS08470	0.78	+0.3
1,903,926	+		LRK53_RS08470	0.78	-1.9
1,903,927	-		LRK53_RS08470	0.78	-0.6
1,903,927	-		LRK53_RS08470	0.78	+1.0
1,904,100	-				-1.2
1,904,100	-				-0.4
1,904,213	+				+1.0
1,904,214	-				+0.5
1,904,579	+		LRK53_RS08475	0.71	-0.8
1,904,579	+		LRK53_RS08475	0.71	-1.1
1,904,579	+		LRK53_RS08475	0.71	+0.4
1,904,579	+		LRK53_RS08475	0.71	-1.5
1,904,579	+		LRK53_RS08475	0.71	-1.3
1,904,580	-		LRK53_RS08475	0.71	-0.6
1,904,580	-		LRK53_RS08475	0.71	-1.5
1,904,580	-		LRK53_RS08475	0.71	-0.6
1,904,580	-		LRK53_RS08475	0.71	-0.4
1,904,594	+		LRK53_RS08475	0.73	+0.6
1,904,594	+		LRK53_RS08475	0.73	-0.4
1,904,594	+		LRK53_RS08475	0.73	+1.6
1,904,594	+		LRK53_RS08475	0.73	+1.0
1,904,594	+		LRK53_RS08475	0.73	+0.2
1,904,594	+		LRK53_RS08475	0.73	-0.1
1,904,594	+		LRK53_RS08475	0.73	+2.0
1,904,594	+		LRK53_RS08475	0.73	-1.0
1,904,594	+		LRK53_RS08475	0.73	-0.0
1,904,594	+		LRK53_RS08475	0.73	+0.8
1,904,594	+		LRK53_RS08475	0.73	-0.2
1,904,595	-		LRK53_RS08475	0.73	-0.1
1,904,595	-		LRK53_RS08475	0.73	-0.0
1,904,595	-		LRK53_RS08475	0.73	-0.8
1,904,595	-		LRK53_RS08475	0.73	-0.0
1,904,595	-		LRK53_RS08475	0.73	+0.6
1,904,595	-		LRK53_RS08475	0.73	+0.2
1,904,595	-		LRK53_RS08475	0.73	-0.3
1,904,595	-		LRK53_RS08475	0.73	-1.0
1,904,595	-		LRK53_RS08475	0.73	+1.4
1,904,748	+				+0.6
1,904,748	+				-0.6
1,904,748	+				-1.2
1,904,748	+				-1.3
1,904,748	+				-0.2
1,904,748	+				-0.3
1,904,748	+				-1.3
1,904,748	+				-0.0
1,904,749	-				-0.7
1,904,749	-				-0.8
1,904,749	-				-0.0
1,904,749	-				-0.6
1,904,754	+				-0.0
1,904,754	+				+0.3
1,904,754	+				-2.3
1,904,754	+				-0.6
1,904,754	+				-1.3
1,904,754	+				-1.7
1,904,754	+				-0.7
1,904,754	+				-0.4
1,904,754	+				-2.7
1,904,754	+				+0.6
1,904,754	+				-0.0
1,904,754	+				+0.3
1,904,754	+				+0.8
1,904,754	+				-1.6
1,904,754	+				-1.2
1,904,754	+				-0.6
1,904,755	-				-0.3
1,904,755	-				+0.4
1,904,755	-				-0.0
1,904,755	-				-0.8
1,904,755	-				-0.1
1,904,755	-				-0.0
1,904,755	-				-0.5
1,904,755	-				-0.1
1,904,755	-				-1.0
1,904,755	-				-0.3
1,904,755	-				-0.8
1,904,755	-				-0.7
1,904,755	-				+0.4
1,904,755	-				-2.8
1,904,755	-				-0.0
1,904,755	-				-2.5
1,904,755	-				-1.0
1,904,755	-				+2.6
1,904,755	-				-1.1
1,904,755	-				-0.6
1,904,822	+				-0.7
1,904,822	+				+1.0
1,904,822	+				-0.0
1,904,822	+				-2.2
1,904,822	+				+1.0
1,904,822	+				+0.7
1,904,822	+				-0.6
1,904,823	-				-0.7
1,904,823	-				-0.0
1,904,823	-				-0.3
1,904,823	-				+0.3
1,904,823	-				+1.0
1,904,901	+				-0.0
1,904,901	+				-0.2
1,904,901	+				-1.4
1,904,901	+				-0.6
1,904,901	+				-1.3
1,904,901	+				-0.5
1,904,901	+				-1.3
1,904,902	-				-0.7
1,904,902	-				-0.6
1,904,902	-				-1.6
1,904,902	-				+0.1
1,904,902	-				+2.0
1,904,902	-				-0.4
1,904,902	-				-0.0
1,904,902	-				+1.0
1,904,902	-				+0.7
1,904,902	-				-1.6
1,904,911	+				-0.5
1,904,911	+				-1.3
1,904,911	+				+0.4
1,904,911	+				-0.6
1,904,911	+				+0.6
1,904,912	-				-0.6
1,904,967	+				+1.0
1,904,967	+				+0.6
1,904,985	+		LRK53_RS08480	0.12	-0.8
1,904,985	+		LRK53_RS08480	0.12	-0.2
1,904,985	+		LRK53_RS08480	0.12	-0.6
1,904,985	+		LRK53_RS08480	0.12	-0.0
1,904,985	+		LRK53_RS08480	0.12	-0.6
1,904,986	-		LRK53_RS08480	0.12	-1.3
1,904,986	-		LRK53_RS08480	0.12	-1.8
1,904,986	-		LRK53_RS08480	0.12	-1.3
1,905,019	-		LRK53_RS08480	0.17	-0.0
1,905,019	-		LRK53_RS08480	0.17	+0.6
1,905,148	+		LRK53_RS08480	0.35	-1.1
1,905,258	+		LRK53_RS08480	0.50	-1.3
1,905,258	+		LRK53_RS08480	0.50	-1.0
1,905,258	+		LRK53_RS08480	0.50	-2.7
1,905,259	-		LRK53_RS08480	0.50	-1.5
1,905,259	-		LRK53_RS08480	0.50	+1.0
1,905,378	+		LRK53_RS08480	0.66	-1.3
1,905,379	-		LRK53_RS08480	0.66	-1.6
1,905,622	+				-0.1
1,905,622	+				+1.0
1,905,622	+				-0.7
1,905,623	-				+1.0
1,905,845	+				-0.6
1,905,845	+				-0.1
1,905,845	+				-0.2
1,905,845	+				-0.4
1,905,845	+				+0.6
1,905,845	+				+0.2
1,905,845	+				-1.0
1,905,845	+				-1.0
1,905,845	+				-1.0
1,905,845	+				-0.8
1,905,845	+				-2.7
1,905,846	-				-0.9
1,905,931	+		LRK53_RS08485	0.19	-0.2
1,905,931	+		LRK53_RS08485	0.19	-0.5
1,905,931	+		LRK53_RS08485	0.19	-0.0
1,905,932	-		LRK53_RS08485	0.19	+1.0
1,905,932	-		LRK53_RS08485	0.19	-1.0
1,905,932	-		LRK53_RS08485	0.19	-1.6
1,905,932	-		LRK53_RS08485	0.19	-1.0
1,906,213	+		LRK53_RS08485	0.55	+0.1
1,906,214	-		LRK53_RS08485	0.55	-1.3
1,906,214	-		LRK53_RS08485	0.55	-0.8
1,906,214	-		LRK53_RS08485	0.55	-1.3
1,906,214	-		LRK53_RS08485	0.55	-0.9
1,906,342	+		LRK53_RS08485	0.72	-0.0
1,906,502	+				-0.6
1,906,502	+				-0.6
1,906,502	+				-0.8
1,906,519	+				-0.0
1,906,519	+				-0.2
1,906,519	+				+0.7
1,906,519	+				-0.0
1,906,519	+				+0.2
1,906,520	-				-0.4
1,906,520	-				-1.6
1,906,520	-				-0.0
1,906,520	-				-0.7
1,906,520	-				-0.8
1,906,545	-				-0.5
1,906,551	+				+0.4
1,906,551	+				+0.7
1,906,551	+				+2.0
1,906,551	+				-1.8
1,906,552	-				-1.2
1,906,552	-				+0.7
1,906,552	-				-0.0
1,906,552	-				+0.4
1,906,552	-				+2.0
1,906,552	-				-1.5
1,906,558	+				-1.0
1,906,559	-				-0.9
1,906,559	-				-0.6
1,906,559	-				-0.9