Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07890

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
1,765,453	+				+1.0
1,765,453	+				+3.0
1,765,466	+				+0.0
1,765,466	+				+1.7
1,765,467	-				-0.3
1,765,467	-				+1.0
1,765,467	-				+1.0
1,765,467	-				-0.3
1,765,507	+				+0.0
1,765,507	+				+0.0
1,765,507	+				+0.0
1,765,507	+				-0.6
1,765,507	+				-0.1
1,765,507	+				+1.0
1,765,508	-				-1.3
1,765,508	-				+1.0
1,765,508	-				+0.0
1,765,508	-				-1.1
1,765,508	-				+0.4
1,765,508	-				-1.0
1,765,508	-				-1.0
1,765,508	-				-1.0
1,765,518	+				+0.2
1,765,518	+				+1.0
1,765,519	-				-0.6
1,765,519	-				-1.0
1,765,519	-				+0.0
1,765,519	-				-1.8
1,765,519	-				-0.6
1,765,519	-				+0.0
1,765,562	+				+1.0
1,765,618	+				-1.6
1,765,618	+				-1.0
1,765,618	+				-1.8
1,765,618	+				+2.0
1,765,618	+				-0.6
1,765,618	+				+0.1
1,765,618	+				-0.4
1,765,619	-				-2.5
1,765,619	-				-0.9
1,765,619	-				+0.4
1,765,619	-				+1.3
1,765,619	-				-1.2
1,765,619	-				+0.0
1,765,619	-				-0.6
1,765,619	-				+0.4
1,765,660	+		LRK53_RS07880	0.19	-1.1
1,765,759	+		LRK53_RS07880	0.46	+1.0
1,765,759	+		LRK53_RS07880	0.46	+0.7
1,765,759	+		LRK53_RS07880	0.46	-0.6
1,765,760	-		LRK53_RS07880	0.47	-1.3
1,765,760	-		LRK53_RS07880	0.47	-0.6
1,765,760	-		LRK53_RS07880	0.47	-1.3
1,765,760	-		LRK53_RS07880	0.47	+0.0
1,765,760	-		LRK53_RS07880	0.47	+0.4
1,765,760	-		LRK53_RS07880	0.47	-1.3
1,765,760	-		LRK53_RS07880	0.47	+0.3
1,765,763	+		LRK53_RS07880	0.48	+0.2
1,765,763	+		LRK53_RS07880	0.48	-0.4
1,765,763	+		LRK53_RS07880	0.48	+0.0
1,765,763	+		LRK53_RS07880	0.48	+0.0
1,765,763	+		LRK53_RS07880	0.48	-1.1
1,765,763	+		LRK53_RS07880	0.48	-1.0
1,765,763	+		LRK53_RS07880	0.48	-0.6
1,765,763	+		LRK53_RS07880	0.48	+0.0
1,765,764	-		LRK53_RS07880	0.48	+1.0
1,765,764	-		LRK53_RS07880	0.48	-1.0
1,765,764	-		LRK53_RS07880	0.48	+0.4
1,765,764	-		LRK53_RS07880	0.48	-0.6
1,765,789	+		LRK53_RS07880	0.55	-1.5
1,765,789	+		LRK53_RS07880	0.55	+0.0
1,765,789	+		LRK53_RS07880	0.55	-0.3
1,765,789	+		LRK53_RS07880	0.55	-0.6
1,765,789	+		LRK53_RS07880	0.55	-1.6
1,765,789	+		LRK53_RS07880	0.55	-1.0
1,765,789	+		LRK53_RS07880	0.55	-0.6
1,765,789	+		LRK53_RS07880	0.55	-1.3
1,765,789	+		LRK53_RS07880	0.55	+0.0
1,765,789	+		LRK53_RS07880	0.55	-1.7
1,765,789	+		LRK53_RS07880	0.55	+0.5
1,765,789	+		LRK53_RS07880	0.55	-1.1
1,765,789	+		LRK53_RS07880	0.55	+0.4
1,765,789	+		LRK53_RS07880	0.55	-0.6
1,765,789	+		LRK53_RS07880	0.55	-0.6
1,765,789	+		LRK53_RS07880	0.55	-1.0
1,765,789	+		LRK53_RS07880	0.55	-1.5
1,765,790	-		LRK53_RS07880	0.55	-0.6
1,765,790	-		LRK53_RS07880	0.55	-0.8
1,765,790	-		LRK53_RS07880	0.55	-1.0
1,765,790	-		LRK53_RS07880	0.55	+2.0
1,765,790	-		LRK53_RS07880	0.55	-2.8
1,765,790	-		LRK53_RS07880	0.55	-0.9
1,765,790	-		LRK53_RS07880	0.55	+1.0
1,765,790	-		LRK53_RS07880	0.55	-0.2
1,765,790	-		LRK53_RS07880	0.55	-0.6
1,765,822	+		LRK53_RS07880	0.64	-0.9
1,765,822	+		LRK53_RS07880	0.64	+1.0
1,765,822	+		LRK53_RS07880	0.64	+0.4
1,765,823	-		LRK53_RS07880	0.64	+0.4
1,765,823	-		LRK53_RS07880	0.64	-1.2
1,765,823	-		LRK53_RS07880	0.64	-0.6
1,765,858	+		LRK53_RS07880	0.74	-1.8
1,765,858	+		LRK53_RS07880	0.74	-1.3
1,765,858	+		LRK53_RS07880	0.74	-1.0
1,765,858	+		LRK53_RS07880	0.74	+0.0
1,765,859	-		LRK53_RS07880	0.75	+0.0
1,765,859	-		LRK53_RS07880	0.75	+1.0
1,765,859	-		LRK53_RS07880	0.75	+0.4
1,765,859	-		LRK53_RS07880	0.75	+0.0
1,765,859	-		LRK53_RS07880	0.75	+1.0
1,765,859	-		LRK53_RS07880	0.75	-0.3
1,765,859	-		LRK53_RS07880	0.75	-0.6
1,765,859	-		LRK53_RS07880	0.75	+0.0
1,765,859	-		LRK53_RS07880	0.75	-2.9
1,765,859	-		LRK53_RS07880	0.75	-0.1
1,765,934	-				-1.6
1,766,065	-		LRK53_RS07885	0.42	-0.5
1,766,112	+		LRK53_RS07885	0.58	-1.0
1,766,112	+		LRK53_RS07885	0.58	+2.0
1,766,112	+		LRK53_RS07885	0.58	+0.0
1,766,112	+		LRK53_RS07885	0.58	-0.9
1,766,112	+		LRK53_RS07885	0.58	-0.8
1,766,112	+		LRK53_RS07885	0.58	-0.8
1,766,112	+		LRK53_RS07885	0.58	-1.0
1,766,112	+		LRK53_RS07885	0.58	+0.3
1,766,163	+		LRK53_RS07885	0.75	+2.0
1,766,163	+		LRK53_RS07885	0.75	-0.6
1,766,315	+				+0.4
1,766,315	+				-0.2
1,766,315	+				+0.6
1,766,315	+				+1.0
1,766,316	-				+1.0
1,766,316	-				-1.0
1,766,316	-				-0.9
1,766,316	-				-1.4
1,766,316	-				+1.0
1,766,329	+				-1.3
1,766,329	+				-1.7
1,766,330	-				+1.0
1,766,330	-				+0.2
1,766,330	-				-2.0
1,766,330	-				+1.7
1,766,332	+				+0.4
1,766,332	+				+0.4
1,766,332	+				+2.6
1,766,332	+				+0.4
1,766,332	+				-1.3
1,766,332	+				-1.8
1,766,332	+				-0.5
1,766,333	-				-0.6
1,766,333	-				-0.6
1,766,333	-				-0.9
1,766,333	-				-1.1
1,766,333	-				-0.7
1,766,333	-				-0.6
1,766,333	-				+1.0
1,766,333	-				-0.8
1,766,333	-				+0.4
1,766,333	-				+0.4
1,766,333	-				-1.3
1,766,336	+				+1.0
1,766,336	+				+0.4
1,766,336	+				-1.0
1,766,336	+				-0.2
1,766,336	+				-0.2
1,766,336	+				-1.0
1,766,336	+				-0.3
1,766,336	+				-0.3
1,766,336	+				+1.0
1,766,337	-				-0.3
1,766,358	-				-1.0
1,766,358	-				-0.6
1,766,368	-				-1.7
1,766,378	+				-0.8
1,766,379	-				-1.3
1,766,379	-				-0.6
1,766,379	-				+0.0
1,766,429	+		LRK53_RS07890	0.16	-1.3
1,766,429	+		LRK53_RS07890	0.16	-0.7
1,766,429	+		LRK53_RS07890	0.16	-0.8
1,766,429	+		LRK53_RS07890	0.16	-0.6
1,766,429	+		LRK53_RS07890	0.16	+1.0
1,766,429	+		LRK53_RS07890	0.16	+0.7
1,766,429	+		LRK53_RS07890	0.16	-1.0
1,766,429	+		LRK53_RS07890	0.16	-1.8
1,766,430	-		LRK53_RS07890	0.16	-2.6
1,766,430	-		LRK53_RS07890	0.16	-0.4
1,766,513	+		LRK53_RS07890	0.38	-0.6
1,766,513	+		LRK53_RS07890	0.38	-1.6
1,766,514	-		LRK53_RS07890	0.39	-1.8
1,766,514	-		LRK53_RS07890	0.39	+0.4
1,766,554	-		LRK53_RS07890	0.49	-1.8
1,766,554	-		LRK53_RS07890	0.49	+1.4
1,766,597	+		LRK53_RS07890	0.61	-1.3
1,766,597	+		LRK53_RS07890	0.61	-1.0
1,766,598	-		LRK53_RS07890	0.61	-2.0
1,766,598	-		LRK53_RS07890	0.61	-1.8
1,766,622	+		LRK53_RS07890	0.67	-0.6
1,766,622	+		LRK53_RS07890	0.67	-1.8
1,766,622	+		LRK53_RS07890	0.67	-1.2
1,766,622	+		LRK53_RS07890	0.67	+0.0
1,766,623	-		LRK53_RS07890	0.68	-1.0
1,766,623	-		LRK53_RS07890	0.68	+1.0
1,766,672	+		LRK53_RS07890	0.81	-1.3
1,766,672	+		LRK53_RS07890	0.81	-0.3
1,766,672	+		LRK53_RS07890	0.81	-1.6
1,766,672	+		LRK53_RS07890	0.81	-1.0
1,766,673	-		LRK53_RS07890	0.81	-1.6
1,766,673	-		LRK53_RS07890	0.81	-1.0
1,766,696	+		LRK53_RS07890	0.87	-1.3
1,766,696	+		LRK53_RS07890	0.87	-0.3
1,766,771	+				-0.9
1,766,791	+				-0.9
1,766,792	-				+1.0
1,766,854	+		LRK53_RS07895	0.29	-0.6
1,766,854	+		LRK53_RS07895	0.29	+1.0
1,766,854	+		LRK53_RS07895	0.29	-0.3
1,766,854	+		LRK53_RS07895	0.29	+1.0
1,766,854	+		LRK53_RS07895	0.29	-0.5
1,766,854	+		LRK53_RS07895	0.29	-0.6
1,766,854	+		LRK53_RS07895	0.29	+0.5
1,766,854	+		LRK53_RS07895	0.29	+0.5
1,766,854	+		LRK53_RS07895	0.29	-1.2
1,766,854	+		LRK53_RS07895	0.29	+0.0
1,766,854	+		LRK53_RS07895	0.29	-0.6
1,766,854	+		LRK53_RS07895	0.29	-0.6
1,766,854	+		LRK53_RS07895	0.29	-0.6
1,766,854	+		LRK53_RS07895	0.29	+0.0
1,766,854	+		LRK53_RS07895	0.29	-1.3
1,766,854	+		LRK53_RS07895	0.29	-2.0
1,766,854	+		LRK53_RS07895	0.29	+0.6
1,766,854	+		LRK53_RS07895	0.29	-1.6
1,766,854	+		LRK53_RS07895	0.29	+1.0
1,766,854	+		LRK53_RS07895	0.29	-1.4
1,766,854	+		LRK53_RS07895	0.29	+1.0
1,766,854	+		LRK53_RS07895	0.29	-1.0
1,766,854	+		LRK53_RS07895	0.29	+0.6
1,766,854	+		LRK53_RS07895	0.29	-0.6
1,766,854	+		LRK53_RS07895	0.29	+0.0
1,766,854	+		LRK53_RS07895	0.29	+0.2
1,766,854	+		LRK53_RS07895	0.29	-1.3
1,766,854	+		LRK53_RS07895	0.29	+0.0
1,766,854	+		LRK53_RS07895	0.29	-0.1
1,766,854	+		LRK53_RS07895	0.29	-2.0
1,766,854	+		LRK53_RS07895	0.29	-1.1
1,766,854	+		LRK53_RS07895	0.29	+0.0
1,766,854	+		LRK53_RS07895	0.29	-1.1
1,766,854	+		LRK53_RS07895	0.29	-0.6
1,766,855	-		LRK53_RS07895	0.30	-1.3
1,766,855	-		LRK53_RS07895	0.30	-0.5
1,766,855	-		LRK53_RS07895	0.30	-1.3
1,766,855	-		LRK53_RS07895	0.30	+0.7
1,766,855	-		LRK53_RS07895	0.30	-1.4
1,766,855	-		LRK53_RS07895	0.30	+1.0
1,766,855	-		LRK53_RS07895	0.30	+1.0
1,766,855	-		LRK53_RS07895	0.30	-1.1
1,766,855	-		LRK53_RS07895	0.30	+0.0
1,766,855	-		LRK53_RS07895	0.30	-1.6
1,766,855	-		LRK53_RS07895	0.30	+0.2
1,766,855	-		LRK53_RS07895	0.30	-0.8
1,766,855	-		LRK53_RS07895	0.30	-1.5
1,766,855	-		LRK53_RS07895	0.30	+1.0
1,766,855	-		LRK53_RS07895	0.30	-2.7
1,766,855	-		LRK53_RS07895	0.30	-0.3
1,766,855	-		LRK53_RS07895	0.30	+1.0
1,766,855	-		LRK53_RS07895	0.30	-1.5
1,766,855	-		LRK53_RS07895	0.30	-0.3
1,766,855	-		LRK53_RS07895	0.30	-0.6
1,766,855	-		LRK53_RS07895	0.30	-0.8
1,766,855	-		LRK53_RS07895	0.30	+0.0
1,766,855	-		LRK53_RS07895	0.30	-1.5
1,766,855	-		LRK53_RS07895	0.30	-2.5
1,766,855	-		LRK53_RS07895	0.30	+0.3
1,766,855	-		LRK53_RS07895	0.30	+0.2
1,766,855	-		LRK53_RS07895	0.30	-1.0
1,766,855	-		LRK53_RS07895	0.30	-2.2
1,766,855	-		LRK53_RS07895	0.30	+0.0
1,766,855	-		LRK53_RS07895	0.30	+0.7
1,766,855	-		LRK53_RS07895	0.30	-0.0
1,766,855	-		LRK53_RS07895	0.30	-0.3
1,766,855	-		LRK53_RS07895	0.30	-0.3
1,766,855	-		LRK53_RS07895	0.30	+1.0
1,766,855	-		LRK53_RS07895	0.30	-1.8
1,766,855	-		LRK53_RS07895	0.30	+0.0
1,766,855	-		LRK53_RS07895	0.30	+2.0
1,766,855	-		LRK53_RS07895	0.30	+0.1
1,766,855	-		LRK53_RS07895	0.30	-0.4
1,766,855	-		LRK53_RS07895	0.30	+0.4
1,766,855	-		LRK53_RS07895	0.30	-2.0
1,766,855	-		LRK53_RS07895	0.30	-0.0
1,766,858	+		LRK53_RS07895	0.31	-1.9
1,766,858	+		LRK53_RS07895	0.31	+1.0
1,766,858	+		LRK53_RS07895	0.31	+0.2
1,766,858	+		LRK53_RS07895	0.31	-1.3
1,766,858	+		LRK53_RS07895	0.31	-0.8
1,766,858	+		LRK53_RS07895	0.31	+1.0
1,766,859	-		LRK53_RS07895	0.32	+1.0
1,766,859	-		LRK53_RS07895	0.32	+1.0
1,766,859	-		LRK53_RS07895	0.32	-1.3
1,766,859	-		LRK53_RS07895	0.32	-0.3
1,766,872	+		LRK53_RS07895	0.37	-1.8
1,766,872	+		LRK53_RS07895	0.37	-0.9
1,766,873	-		LRK53_RS07895	0.38	-0.6
1,766,873	-		LRK53_RS07895	0.38	+2.0
1,766,881	+		LRK53_RS07895	0.42	-0.5
1,766,881	+		LRK53_RS07895	0.42	+1.3
1,766,881	+		LRK53_RS07895	0.42	-1.2
1,766,881	+		LRK53_RS07895	0.42	+1.0
1,766,881	+		LRK53_RS07895	0.42	+1.0
1,766,882	-		LRK53_RS07895	0.42	+0.0
1,766,882	-		LRK53_RS07895	0.42	-0.6
1,766,977	+		LRK53_RS07895	0.85	-1.7
1,766,977	+		LRK53_RS07895	0.85	-1.0
1,766,977	+		LRK53_RS07895	0.85	+0.2
1,766,977	+		LRK53_RS07895	0.85	-1.6
1,766,978	-		LRK53_RS07895	0.86	-1.8
1,766,978	-		LRK53_RS07895	0.86	-1.5
1,766,994	+				+0.3
1,766,994	+				+0.0
1,767,046	-				+1.0
1,767,046	-				+0.0
1,767,046	-				+0.0
1,767,046	-				-0.3
1,767,046	-				-0.7
1,767,046	-				-1.0
1,767,046	-				-0.5
1,767,046	-				-0.6
1,767,046	-				+1.0
1,767,046	-				+0.0
1,767,046	-				-0.6
1,767,052	-				-0.6
1,767,709	+				-2.2
1,767,709	+				-0.6
1,767,709	+				-0.9
1,767,709	+				+0.0
1,767,709	+				-0.4
1,767,709	+				-0.4
1,767,709	+				+1.6
1,767,709	+				-1.8
1,767,709	+				-1.6
1,767,713	+				-0.9
1,767,713	+				-1.0
1,767,713	+				+0.6
1,767,713	+				-0.6
1,767,713	+				+0.0
1,767,713	+				+0.3
1,767,713	+				+0.4
1,767,713	+				+1.0
1,767,713	+				-0.3
1,767,713	+				+0.4
1,767,713	+				-1.0
1,767,713	+				+1.0
1,767,713	+				+1.0
1,767,713	+				-0.5
1,767,713	+				-1.0
1,767,713	+				-1.7
1,767,713	+				-0.3
1,767,713	+				+0.0
1,767,713	+				+0.2
1,767,713	+				+1.0
1,767,713	+				+0.0
1,767,713	+				-1.9
1,767,713	+				-0.6
1,767,713	+				-1.3
1,767,713	+				-1.0
1,767,713	+				+0.4
1,767,713	+				-0.9
1,767,713	+				+1.0
1,767,713	+				+1.0
1,767,713	+				-0.4
1,767,713	+				-1.3
1,767,713	+				+1.0
1,767,713	+				+0.0
1,767,713	+				-1.0
1,767,713	+				-0.3
1,767,713	+				+0.3
1,767,713	+				-0.3
1,767,713	+				-0.4