Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04755

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
1,109,089	+		LRK53_RS04750	0.34	-0.0
1,109,089	+		LRK53_RS04750	0.34	+1.4
1,109,089	+		LRK53_RS04750	0.34	+1.3
1,109,090	-		LRK53_RS04750	0.34	-0.6
1,109,090	-		LRK53_RS04750	0.34	-1.7
1,109,090	-		LRK53_RS04750	0.34	+0.4
1,109,090	-		LRK53_RS04750	0.34	-1.7
1,109,090	-		LRK53_RS04750	0.34	-0.6
1,109,092	+		LRK53_RS04750	0.34	-1.3
1,109,093	-		LRK53_RS04750	0.34	-1.0
1,109,093	-		LRK53_RS04750	0.34	+1.0
1,109,115	-		LRK53_RS04750	0.36	-1.4
1,109,567	-		LRK53_RS04750	0.68	+1.0
1,109,567	-		LRK53_RS04750	0.68	-1.6
1,109,567	-		LRK53_RS04750	0.68	+2.0
1,109,569	+		LRK53_RS04750	0.68	-1.0
1,109,569	+		LRK53_RS04750	0.68	+1.7
1,109,569	+		LRK53_RS04750	0.68	+1.0
1,109,569	+		LRK53_RS04750	0.68	-0.3
1,109,570	-		LRK53_RS04750	0.68	-0.0
1,109,570	-		LRK53_RS04750	0.68	-0.6
1,109,606	-		LRK53_RS04750	0.71	+0.4
1,109,851	+		LRK53_RS04750	0.89	+0.3
1,109,948	+				-1.0
1,109,949	-				+0.2
1,109,949	-				-0.3
1,109,992	-				-0.0
1,109,992	-				+2.0
1,110,021	+				-0.6
1,110,039	-				+0.1
1,110,101	+				-1.7
1,110,101	+				+0.4
1,110,101	+				-0.3
1,110,101	+				-1.6
1,110,102	-				-1.3
1,110,102	-				-1.3
1,110,113	+		LRK53_RS04755	0.13	-1.1
1,110,113	+		LRK53_RS04755	0.13	-1.0
1,110,113	+		LRK53_RS04755	0.13	-1.0
1,110,113	+		LRK53_RS04755	0.13	-1.0
1,110,114	-		LRK53_RS04755	0.13	-2.0
1,110,114	-		LRK53_RS04755	0.13	-0.0
1,110,114	-		LRK53_RS04755	0.13	-0.6
1,110,114	-		LRK53_RS04755	0.13	+2.0
1,110,180	+		LRK53_RS04755	0.41	+1.0
1,110,180	+		LRK53_RS04755	0.41	-0.9
1,110,180	+		LRK53_RS04755	0.41	-0.7
1,110,180	+		LRK53_RS04755	0.41	-1.3
1,110,180	+		LRK53_RS04755	0.41	-0.5
1,110,180	+		LRK53_RS04755	0.41	-0.3
1,110,180	+		LRK53_RS04755	0.41	-1.3
1,110,180	+		LRK53_RS04755	0.41	-0.2
1,110,180	+		LRK53_RS04755	0.41	-0.9
1,110,180	+		LRK53_RS04755	0.41	+1.0
1,110,180	+		LRK53_RS04755	0.41	-1.9
1,110,180	+		LRK53_RS04755	0.41	-2.0
1,110,180	+		LRK53_RS04755	0.41	-1.0
1,110,181	-		LRK53_RS04755	0.41	-0.0
1,110,181	-		LRK53_RS04755	0.41	-0.4
1,110,181	-		LRK53_RS04755	0.41	-0.6
1,110,181	-		LRK53_RS04755	0.41	-1.6
1,110,181	-		LRK53_RS04755	0.41	-0.6
1,110,181	-		LRK53_RS04755	0.41	+1.0
1,110,181	-		LRK53_RS04755	0.41	-0.5
1,110,216	-		LRK53_RS04755	0.56	-0.0
1,110,281	-		LRK53_RS04755	0.84	-2.2
1,110,317	+				+1.6
1,110,317	+				-1.6
1,110,317	+				-0.3
1,110,317	+				+0.4
1,110,317	+				-0.3
1,110,317	+				-1.2
1,110,317	+				-1.0
1,110,317	+				+1.0
1,110,317	+				-0.9
1,110,414	+				-0.0
1,110,414	+				+2.6
1,110,414	+				+0.4
1,110,414	+				-0.4
1,110,414	+				-0.3
1,110,414	+				-0.8
1,110,415	-				-0.0
1,110,415	-				-0.7
1,110,415	-				-2.0
1,110,415	-				-1.3
1,110,652	-		LRK53_RS04760	0.44	-0.4
1,110,652	-		LRK53_RS04760	0.44	-1.1
1,110,710	+		LRK53_RS04760	0.54	+0.4
1,110,710	+		LRK53_RS04760	0.54	-1.0
1,110,710	+		LRK53_RS04760	0.54	-0.4
1,110,710	+		LRK53_RS04760	0.54	+0.1
1,110,710	+		LRK53_RS04760	0.54	-1.3
1,110,710	+		LRK53_RS04760	0.54	-0.0
1,110,710	+		LRK53_RS04760	0.54	-0.6
1,110,710	+		LRK53_RS04760	0.54	-0.1
1,110,711	-		LRK53_RS04760	0.54	+1.0
1,110,711	-		LRK53_RS04760	0.54	-1.8
1,110,711	-		LRK53_RS04760	0.54	-0.0
1,110,711	-		LRK53_RS04760	0.54	-1.8
1,110,711	-		LRK53_RS04760	0.54	-0.9
1,110,747	+		LRK53_RS04760	0.60	-0.1
1,110,747	+		LRK53_RS04760	0.60	-0.6
1,110,748	-		LRK53_RS04760	0.61	-1.5
1,110,750	+		LRK53_RS04760	0.61	-1.0
1,110,750	+		LRK53_RS04760	0.61	-0.8
1,110,750	+		LRK53_RS04760	0.61	+0.4
1,110,750	+		LRK53_RS04760	0.61	-0.6
1,110,750	+		LRK53_RS04760	0.61	-0.0
1,110,750	+		LRK53_RS04760	0.61	+0.6
1,110,750	+		LRK53_RS04760	0.61	-1.7
1,110,750	+		LRK53_RS04760	0.61	+0.6
1,110,750	+		LRK53_RS04760	0.61	+2.0
1,110,750	+		LRK53_RS04760	0.61	-0.2
1,110,750	+		LRK53_RS04760	0.61	-1.0
1,110,750	+		LRK53_RS04760	0.61	+0.4
1,110,751	-		LRK53_RS04760	0.61	+0.4
1,110,751	-		LRK53_RS04760	0.61	-1.3
1,110,751	-		LRK53_RS04760	0.61	-0.0
1,110,751	-		LRK53_RS04760	0.61	+1.0
1,110,751	-		LRK53_RS04760	0.61	+1.0
1,110,751	-		LRK53_RS04760	0.61	+0.3
1,110,751	-		LRK53_RS04760	0.61	-0.0
1,110,751	-		LRK53_RS04760	0.61	-0.0
1,110,837	+		LRK53_RS04760	0.76	-0.3
1,110,837	+		LRK53_RS04760	0.76	+1.0
1,110,837	+		LRK53_RS04760	0.76	-1.0
1,110,837	+		LRK53_RS04760	0.76	+0.4
1,110,838	-		LRK53_RS04760	0.76	+0.4
1,110,838	-		LRK53_RS04760	0.76	-1.8
1,110,838	-		LRK53_RS04760	0.76	-0.0
1,110,838	-		LRK53_RS04760	0.76	+0.4
1,110,838	-		LRK53_RS04760	0.76	-0.8
1,110,838	-		LRK53_RS04760	0.76	-1.8
1,110,838	-		LRK53_RS04760	0.76	-0.0
1,110,838	-		LRK53_RS04760	0.76	-0.2
1,110,838	-		LRK53_RS04760	0.76	-0.6
1,110,838	-		LRK53_RS04760	0.76	+0.7
1,110,838	-		LRK53_RS04760	0.76	-0.4
1,110,838	-		LRK53_RS04760	0.76	-0.3
1,111,014	+				-1.6
1,111,014	+				-1.6
1,111,014	+				-0.8
1,111,015	-				-0.0
1,111,015	-				-0.0
1,111,040	+				-0.0
1,111,040	+				-0.0
1,111,040	+				-1.3
1,111,040	+				+1.0
1,111,040	+				-0.7
1,111,041	-				-0.2
1,111,041	-				-1.0
1,111,041	-				-0.1
1,111,041	-				-0.0
1,111,041	-				-0.9
1,111,041	-				-0.0
1,111,053	+				+0.6
1,111,053	+				-1.8
1,111,053	+				-0.8
1,111,053	+				-1.6
1,111,054	-				-0.1
1,111,054	-				+1.0
1,111,054	-				-0.3
1,111,216	+		LRK53_RS04765	0.11	-0.8
1,111,216	+		LRK53_RS04765	0.11	-0.1
1,111,217	-		LRK53_RS04765	0.11	-0.6
1,111,252	+		LRK53_RS04765	0.13	-0.6
1,111,253	-		LRK53_RS04765	0.13	-0.9