Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK53_RS00575 and LRK53_RS00580 are separated by 187 nucleotides LRK53_RS00580 and LRK53_RS00585 are separated by 34 nucleotides
LRK53_RS00575: LRK53_RS00575 - glycosyl transferase family 36, at 128,111 to 131,980
_RS00575
LRK53_RS00580: LRK53_RS00580 - hypothetical protein, at 132,168 to 133,502
_RS00580
LRK53_RS00585: LRK53_RS00585 - decarboxylating 6-phosphogluconate dehydrogenase, at 133,537 to 134,442
_RS00585
Position (kb) 132
133
134 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 131.264 kb on + strand, within LRK53_RS00575 at 131.575 kb on - strand, within LRK53_RS00575 at 131.677 kb on + strand at 131.677 kb on + strand at 131.677 kb on + strand at 131.677 kb on + strand at 131.677 kb on + strand at 131.677 kb on + strand at 131.677 kb on + strand at 131.677 kb on + strand at 131.678 kb on - strand at 131.678 kb on - strand at 131.678 kb on - strand at 131.678 kb on - strand at 131.678 kb on - strand at 131.681 kb on + strand at 131.681 kb on + strand at 131.681 kb on + strand at 131.681 kb on + strand at 131.681 kb on + strand at 131.681 kb on + strand at 131.681 kb on + strand at 131.681 kb on + strand at 131.681 kb on + strand at 131.682 kb on - strand at 131.682 kb on - strand at 131.682 kb on - strand at 131.682 kb on - strand at 131.682 kb on - strand at 131.682 kb on - strand at 131.682 kb on - strand at 131.682 kb on - strand at 131.682 kb on - strand at 131.682 kb on - strand at 131.682 kb on - strand at 131.682 kb on - strand at 131.682 kb on - strand at 131.682 kb on - strand at 131.682 kb on - strand at 131.682 kb on - strand at 131.757 kb on + strand at 131.758 kb on - strand at 131.814 kb on + strand at 131.814 kb on + strand at 131.814 kb on + strand at 131.814 kb on + strand at 131.814 kb on + strand at 131.814 kb on + strand at 131.814 kb on + strand at 131.815 kb on - strand at 131.815 kb on - strand at 131.815 kb on - strand at 131.815 kb on - strand at 131.815 kb on - strand at 131.815 kb on - strand at 131.815 kb on - strand at 131.815 kb on - strand at 131.916 kb on + strand at 132.031 kb on + strand at 132.031 kb on + strand at 132.031 kb on + strand at 132.032 kb on - strand at 132.032 kb on - strand at 132.068 kb on + strand at 132.068 kb on + strand at 132.068 kb on + strand at 132.068 kb on + strand at 132.068 kb on + strand at 132.069 kb on - strand at 132.243 kb on + strand at 132.243 kb on + strand at 132.244 kb on - strand at 132.252 kb on + strand at 132.253 kb on - strand at 132.474 kb on + strand, within LRK53_RS00580 at 132.474 kb on + strand, within LRK53_RS00580 at 132.474 kb on + strand, within LRK53_RS00580 at 132.474 kb on + strand, within LRK53_RS00580 at 132.474 kb on + strand, within LRK53_RS00580 at 132.474 kb on + strand, within LRK53_RS00580 at 132.474 kb on + strand, within LRK53_RS00580 at 132.474 kb on + strand, within LRK53_RS00580 at 132.474 kb on + strand, within LRK53_RS00580 at 132.474 kb on + strand, within LRK53_RS00580 at 132.475 kb on - strand, within LRK53_RS00580 at 132.475 kb on - strand, within LRK53_RS00580 at 132.475 kb on - strand, within LRK53_RS00580 at 132.475 kb on - strand, within LRK53_RS00580 at 132.477 kb on + strand, within LRK53_RS00580 at 132.477 kb on + strand, within LRK53_RS00580 at 132.477 kb on + strand, within LRK53_RS00580 at 132.477 kb on + strand, within LRK53_RS00580 at 132.477 kb on + strand, within LRK53_RS00580 at 132.478 kb on - strand, within LRK53_RS00580 at 132.478 kb on - strand, within LRK53_RS00580 at 132.579 kb on + strand, within LRK53_RS00580 at 132.579 kb on + strand, within LRK53_RS00580 at 132.580 kb on - strand, within LRK53_RS00580 at 132.580 kb on - strand, within LRK53_RS00580 at 132.580 kb on - strand, within LRK53_RS00580 at 132.636 kb on + strand, within LRK53_RS00580 at 132.637 kb on - strand, within LRK53_RS00580 at 132.637 kb on - strand, within LRK53_RS00580 at 132.637 kb on - strand, within LRK53_RS00580 at 132.756 kb on + strand, within LRK53_RS00580 at 132.756 kb on + strand, within LRK53_RS00580 at 132.756 kb on + strand, within LRK53_RS00580 at 132.756 kb on + strand, within LRK53_RS00580 at 132.757 kb on - strand, within LRK53_RS00580 at 132.757 kb on - strand, within LRK53_RS00580 at 132.757 kb on - strand, within LRK53_RS00580 at 132.757 kb on - strand, within LRK53_RS00580 at 132.757 kb on - strand, within LRK53_RS00580 at 132.804 kb on + strand, within LRK53_RS00580 at 132.804 kb on + strand, within LRK53_RS00580 at 132.805 kb on - strand, within LRK53_RS00580 at 132.805 kb on - strand, within LRK53_RS00580 at 132.825 kb on + strand, within LRK53_RS00580 at 132.825 kb on + strand, within LRK53_RS00580 at 132.825 kb on + strand, within LRK53_RS00580 at 132.826 kb on - strand, within LRK53_RS00580 at 132.826 kb on - strand, within LRK53_RS00580 at 132.843 kb on + strand, within LRK53_RS00580 at 132.843 kb on + strand, within LRK53_RS00580 at 132.843 kb on + strand, within LRK53_RS00580 at 132.843 kb on + strand, within LRK53_RS00580 at 132.844 kb on - strand, within LRK53_RS00580 at 132.855 kb on + strand, within LRK53_RS00580 at 132.855 kb on + strand, within LRK53_RS00580 at 132.855 kb on + strand, within LRK53_RS00580 at 132.855 kb on + strand, within LRK53_RS00580 at 132.855 kb on + strand, within LRK53_RS00580 at 132.855 kb on + strand, within LRK53_RS00580 at 132.855 kb on + strand, within LRK53_RS00580 at 132.855 kb on + strand, within LRK53_RS00580 at 132.855 kb on + strand, within LRK53_RS00580 at 132.856 kb on - strand, within LRK53_RS00580 at 132.856 kb on - strand, within LRK53_RS00580 at 132.861 kb on + strand, within LRK53_RS00580 at 132.861 kb on + strand, within LRK53_RS00580 at 132.861 kb on + strand, within LRK53_RS00580 at 132.861 kb on + strand, within LRK53_RS00580 at 132.861 kb on + strand, within LRK53_RS00580 at 132.862 kb on - strand, within LRK53_RS00580 at 132.862 kb on - strand, within LRK53_RS00580 at 132.862 kb on - strand, within LRK53_RS00580 at 132.954 kb on + strand, within LRK53_RS00580 at 132.954 kb on + strand, within LRK53_RS00580 at 132.954 kb on + strand, within LRK53_RS00580 at 132.954 kb on + strand, within LRK53_RS00580 at 132.955 kb on - strand, within LRK53_RS00580 at 132.955 kb on - strand, within LRK53_RS00580 at 132.996 kb on + strand, within LRK53_RS00580 at 133.029 kb on + strand, within LRK53_RS00580 at 133.113 kb on + strand, within LRK53_RS00580 at 133.113 kb on + strand, within LRK53_RS00580 at 133.113 kb on + strand, within LRK53_RS00580 at 133.114 kb on - strand, within LRK53_RS00580 at 133.114 kb on - strand, within LRK53_RS00580 at 133.114 kb on - strand, within LRK53_RS00580 at 133.114 kb on - strand, within LRK53_RS00580 at 133.114 kb on - strand, within LRK53_RS00580 at 133.119 kb on + strand, within LRK53_RS00580 at 133.119 kb on + strand, within LRK53_RS00580 at 133.120 kb on - strand, within LRK53_RS00580 at 133.120 kb on - strand, within LRK53_RS00580 at 133.120 kb on - strand, within LRK53_RS00580 at 133.120 kb on - strand, within LRK53_RS00580 at 133.120 kb on - strand, within LRK53_RS00580 at 133.120 kb on - strand, within LRK53_RS00580 at 133.120 kb on - strand, within LRK53_RS00580 at 133.120 kb on - strand, within LRK53_RS00580 at 133.227 kb on + strand, within LRK53_RS00580 at 133.227 kb on + strand, within LRK53_RS00580 at 133.227 kb on + strand, within LRK53_RS00580 at 133.227 kb on + strand, within LRK53_RS00580 at 133.227 kb on + strand, within LRK53_RS00580 at 133.228 kb on - strand, within LRK53_RS00580 at 133.228 kb on - strand, within LRK53_RS00580 at 133.228 kb on - strand, within LRK53_RS00580 at 133.228 kb on - strand, within LRK53_RS00580 at 133.228 kb on - strand, within LRK53_RS00580 at 133.228 kb on - strand, within LRK53_RS00580 at 133.228 kb on - strand, within LRK53_RS00580 at 133.228 kb on - strand, within LRK53_RS00580 at 133.228 kb on - strand, within LRK53_RS00580 at 133.228 kb on - strand, within LRK53_RS00580 at 133.266 kb on + strand, within LRK53_RS00580 at 133.342 kb on - strand, within LRK53_RS00580 at 133.828 kb on + strand, within LRK53_RS00585 at 133.828 kb on + strand, within LRK53_RS00585 at 133.828 kb on + strand, within LRK53_RS00585 at 133.828 kb on + strand, within LRK53_RS00585 at 133.828 kb on + strand, within LRK53_RS00585 at 133.828 kb on + strand, within LRK53_RS00585 at 133.829 kb on - strand, within LRK53_RS00585 at 133.829 kb on - strand, within LRK53_RS00585 at 133.829 kb on - strand, within LRK53_RS00585 at 133.829 kb on - strand, within LRK53_RS00585 at 133.829 kb on - strand, within LRK53_RS00585 at 133.829 kb on - strand, within LRK53_RS00585 at 133.829 kb on - strand, within LRK53_RS00585 at 133.829 kb on - strand, within LRK53_RS00585 at 133.829 kb on - strand, within LRK53_RS00585 at 133.829 kb on - strand, within LRK53_RS00585 at 133.829 kb on - strand, within LRK53_RS00585 at 133.879 kb on + strand, within LRK53_RS00585 at 133.879 kb on + strand, within LRK53_RS00585 at 133.879 kb on + strand, within LRK53_RS00585 at 133.880 kb on - strand, within LRK53_RS00585 at 133.880 kb on - strand, within LRK53_RS00585 at 133.880 kb on - strand, within LRK53_RS00585 at 133.880 kb on - strand, within LRK53_RS00585 at 133.880 kb on - strand, within LRK53_RS00585 at 133.880 kb on - strand, within LRK53_RS00585 at 133.927 kb on + strand, within LRK53_RS00585 at 133.927 kb on + strand, within LRK53_RS00585 at 133.927 kb on + strand, within LRK53_RS00585 at 133.927 kb on + strand, within LRK53_RS00585 at 133.928 kb on - strand, within LRK53_RS00585 at 133.928 kb on - strand, within LRK53_RS00585 at 133.928 kb on - strand, within LRK53_RS00585 at 133.928 kb on - strand, within LRK53_RS00585 at 133.928 kb on - strand, within LRK53_RS00585 at 134.077 kb on + strand, within LRK53_RS00585 at 134.078 kb on - strand, within LRK53_RS00585 at 134.095 kb on + strand, within LRK53_RS00585 at 134.095 kb on + strand, within LRK53_RS00585 at 134.257 kb on + strand, within LRK53_RS00585 at 134.257 kb on + strand, within LRK53_RS00585 at 134.257 kb on + strand, within LRK53_RS00585 at 134.257 kb on + strand, within LRK53_RS00585 at 134.257 kb on + strand, within LRK53_RS00585 at 134.257 kb on + strand, within LRK53_RS00585 at 134.258 kb on - strand, within LRK53_RS00585 at 134.258 kb on - strand, within LRK53_RS00585 at 134.258 kb on - strand, within LRK53_RS00585 at 134.258 kb on - strand, within LRK53_RS00585 at 134.353 kb on + strand at 134.440 kb on + strand at 134.440 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 2 x remove 131,264 + LRK53_RS00575 0.81 -0.3 131,575 - LRK53_RS00575 0.90 +0.2 131,677 + -0.3 131,677 + +1.0 131,677 + -0.6 131,677 + -0.0 131,677 + +0.5 131,677 + -0.0 131,677 + -1.9 131,677 + -0.6 131,678 - +1.6 131,678 - -2.3 131,678 - -0.9 131,678 - -0.6 131,678 - +2.0 131,681 + +1.0 131,681 + +0.6 131,681 + -0.0 131,681 + -0.5 131,681 + +1.0 131,681 + -2.8 131,681 + -1.2 131,681 + +0.6 131,681 + -1.6 131,682 - -1.0 131,682 - +1.0 131,682 - -1.6 131,682 - -1.0 131,682 - -0.0 131,682 - -0.6 131,682 - -0.4 131,682 - -1.4 131,682 - -0.9 131,682 - -0.8 131,682 - +1.0 131,682 - +2.6 131,682 - -0.6 131,682 - -0.0 131,682 - -1.4 131,682 - +1.0 131,757 + -0.0 131,758 - +0.6 131,814 + -1.2 131,814 + +1.0 131,814 + -0.6 131,814 + -0.0 131,814 + -1.3 131,814 + -1.6 131,814 + -2.0 131,815 - -1.9 131,815 - -0.6 131,815 - -1.3 131,815 - -0.5 131,815 - +0.2 131,815 - +0.5 131,815 - -0.3 131,815 - +1.0 131,916 + -0.0 132,031 + -0.0 132,031 + -2.0 132,031 + +0.7 132,032 - -0.9 132,032 - -1.0 132,068 + +1.0 132,068 + -0.5 132,068 + -2.2 132,068 + +1.0 132,068 + +0.4 132,069 - -1.4 132,243 + -0.4 132,243 + -2.0 132,244 - -0.8 132,252 + +1.0 132,253 - -0.6 132,474 + LRK53_RS00580 0.23 +2.0 132,474 + LRK53_RS00580 0.23 -1.0 132,474 + LRK53_RS00580 0.23 -1.4 132,474 + LRK53_RS00580 0.23 +2.0 132,474 + LRK53_RS00580 0.23 +0.6 132,474 + LRK53_RS00580 0.23 +1.4 132,474 + LRK53_RS00580 0.23 +0.6 132,474 + LRK53_RS00580 0.23 -0.6 132,474 + LRK53_RS00580 0.23 -2.6 132,474 + LRK53_RS00580 0.23 -0.8 132,475 - LRK53_RS00580 0.23 -0.0 132,475 - LRK53_RS00580 0.23 -0.0 132,475 - LRK53_RS00580 0.23 -1.3 132,475 - LRK53_RS00580 0.23 +1.0 132,477 + LRK53_RS00580 0.23 -0.0 132,477 + LRK53_RS00580 0.23 -1.6 132,477 + LRK53_RS00580 0.23 -0.3 132,477 + LRK53_RS00580 0.23 +1.0 132,477 + LRK53_RS00580 0.23 -1.5 132,478 - LRK53_RS00580 0.23 -1.0 132,478 - LRK53_RS00580 0.23 +0.4 132,579 + LRK53_RS00580 0.31 -1.6 132,579 + LRK53_RS00580 0.31 -1.6 132,580 - LRK53_RS00580 0.31 -0.0 132,580 - LRK53_RS00580 0.31 -1.2 132,580 - LRK53_RS00580 0.31 -1.3 132,636 + LRK53_RS00580 0.35 -0.6 132,637 - LRK53_RS00580 0.35 -0.6 132,637 - LRK53_RS00580 0.35 -0.3 132,637 - LRK53_RS00580 0.35 -0.0 132,756 + LRK53_RS00580 0.44 -0.6 132,756 + LRK53_RS00580 0.44 -0.6 132,756 + LRK53_RS00580 0.44 -0.0 132,756 + LRK53_RS00580 0.44 -1.0 132,757 - LRK53_RS00580 0.44 +0.1 132,757 - LRK53_RS00580 0.44 -1.3 132,757 - LRK53_RS00580 0.44 -0.6 132,757 - LRK53_RS00580 0.44 -1.3 132,757 - LRK53_RS00580 0.44 -0.0 132,804 + LRK53_RS00580 0.48 -0.3 132,804 + LRK53_RS00580 0.48 -0.9 132,805 - LRK53_RS00580 0.48 -0.0 132,805 - LRK53_RS00580 0.48 -1.0 132,825 + LRK53_RS00580 0.49 -0.2 132,825 + LRK53_RS00580 0.49 +0.6 132,825 + LRK53_RS00580 0.49 -1.0 132,826 - LRK53_RS00580 0.49 -1.5 132,826 - LRK53_RS00580 0.49 -0.3 132,843 + LRK53_RS00580 0.51 -0.3 132,843 + LRK53_RS00580 0.51 +2.6 132,843 + LRK53_RS00580 0.51 -0.6 132,843 + LRK53_RS00580 0.51 -1.2 132,844 - LRK53_RS00580 0.51 +2.0 132,855 + LRK53_RS00580 0.51 +0.5 132,855 + LRK53_RS00580 0.51 -0.0 132,855 + LRK53_RS00580 0.51 -2.3 132,855 + LRK53_RS00580 0.51 -0.4 132,855 + LRK53_RS00580 0.51 -0.3 132,855 + LRK53_RS00580 0.51 +1.0 132,855 + LRK53_RS00580 0.51 -2.5 132,855 + LRK53_RS00580 0.51 -1.2 132,855 + LRK53_RS00580 0.51 -0.9 132,856 - LRK53_RS00580 0.52 -1.8 132,856 - LRK53_RS00580 0.52 +0.2 132,861 + LRK53_RS00580 0.52 -0.2 132,861 + LRK53_RS00580 0.52 -0.0 132,861 + LRK53_RS00580 0.52 -1.3 132,861 + LRK53_RS00580 0.52 -0.5 132,861 + LRK53_RS00580 0.52 +1.0 132,862 - LRK53_RS00580 0.52 -1.6 132,862 - LRK53_RS00580 0.52 -1.0 132,862 - LRK53_RS00580 0.52 +0.1 132,954 + LRK53_RS00580 0.59 -1.3 132,954 + LRK53_RS00580 0.59 +1.0 132,954 + LRK53_RS00580 0.59 +0.4 132,954 + LRK53_RS00580 0.59 -0.6 132,955 - LRK53_RS00580 0.59 +1.2 132,955 - LRK53_RS00580 0.59 +0.1 132,996 + LRK53_RS00580 0.62 -0.3 133,029 + LRK53_RS00580 0.64 -1.3 133,113 + LRK53_RS00580 0.71 +1.0 133,113 + LRK53_RS00580 0.71 -0.0 133,113 + LRK53_RS00580 0.71 +0.4 133,114 - LRK53_RS00580 0.71 -0.6 133,114 - LRK53_RS00580 0.71 -0.0 133,114 - LRK53_RS00580 0.71 -0.6 133,114 - LRK53_RS00580 0.71 -1.7 133,114 - LRK53_RS00580 0.71 -0.0 133,119 + LRK53_RS00580 0.71 -0.3 133,119 + LRK53_RS00580 0.71 -0.6 133,120 - LRK53_RS00580 0.71 +1.0 133,120 - LRK53_RS00580 0.71 +0.4 133,120 - LRK53_RS00580 0.71 -2.1 133,120 - LRK53_RS00580 0.71 -0.5 133,120 - LRK53_RS00580 0.71 -1.2 133,120 - LRK53_RS00580 0.71 -1.0 133,120 - LRK53_RS00580 0.71 -0.5 133,120 - LRK53_RS00580 0.71 -2.0 133,227 + LRK53_RS00580 0.79 +0.4 133,227 + LRK53_RS00580 0.79 +0.6 133,227 + LRK53_RS00580 0.79 -0.2 133,227 + LRK53_RS00580 0.79 -1.8 133,227 + LRK53_RS00580 0.79 +1.0 133,228 - LRK53_RS00580 0.79 -0.3 133,228 - LRK53_RS00580 0.79 -1.6 133,228 - LRK53_RS00580 0.79 -1.0 133,228 - LRK53_RS00580 0.79 +1.0 133,228 - LRK53_RS00580 0.79 -0.0 133,228 - LRK53_RS00580 0.79 -0.6 133,228 - LRK53_RS00580 0.79 -0.2 133,228 - LRK53_RS00580 0.79 +1.6 133,228 - LRK53_RS00580 0.79 -0.0 133,228 - LRK53_RS00580 0.79 -0.6 133,266 + LRK53_RS00580 0.82 -0.5 133,342 - LRK53_RS00580 0.88 -0.1 133,828 + LRK53_RS00585 0.32 +0.3 133,828 + LRK53_RS00585 0.32 -1.2 133,828 + LRK53_RS00585 0.32 -0.8 133,828 + LRK53_RS00585 0.32 -0.0 133,828 + LRK53_RS00585 0.32 -0.0 133,828 + LRK53_RS00585 0.32 -1.0 133,829 - LRK53_RS00585 0.32 -0.0 133,829 - LRK53_RS00585 0.32 +0.6 133,829 - LRK53_RS00585 0.32 +1.6 133,829 - LRK53_RS00585 0.32 +1.0 133,829 - LRK53_RS00585 0.32 -1.5 133,829 - LRK53_RS00585 0.32 +0.6 133,829 - LRK53_RS00585 0.32 -0.4 133,829 - LRK53_RS00585 0.32 +1.0 133,829 - LRK53_RS00585 0.32 -0.9 133,829 - LRK53_RS00585 0.32 -0.6 133,829 - LRK53_RS00585 0.32 -0.6 133,879 + LRK53_RS00585 0.38 -0.6 133,879 + LRK53_RS00585 0.38 -0.8 133,879 + LRK53_RS00585 0.38 -1.8 133,880 - LRK53_RS00585 0.38 +2.0 133,880 - LRK53_RS00585 0.38 -1.0 133,880 - LRK53_RS00585 0.38 +1.6 133,880 - LRK53_RS00585 0.38 +2.6 133,880 - LRK53_RS00585 0.38 +1.0 133,880 - LRK53_RS00585 0.38 -0.4 133,927 + LRK53_RS00585 0.43 -0.6 133,927 + LRK53_RS00585 0.43 -0.8 133,927 + LRK53_RS00585 0.43 -1.2 133,927 + LRK53_RS00585 0.43 -1.3 133,928 - LRK53_RS00585 0.43 +1.0 133,928 - LRK53_RS00585 0.43 +1.0 133,928 - LRK53_RS00585 0.43 -1.0 133,928 - LRK53_RS00585 0.43 -1.0 133,928 - LRK53_RS00585 0.43 -1.3 134,077 + LRK53_RS00585 0.60 -0.0 134,078 - LRK53_RS00585 0.60 -1.3 134,095 + LRK53_RS00585 0.62 -0.3 134,095 + LRK53_RS00585 0.62 -0.0 134,257 + LRK53_RS00585 0.79 -0.6 134,257 + LRK53_RS00585 0.79 +1.0 134,257 + LRK53_RS00585 0.79 -1.7 134,257 + LRK53_RS00585 0.79 +1.0 134,257 + LRK53_RS00585 0.79 -0.0 134,257 + LRK53_RS00585 0.79 -1.2 134,258 - LRK53_RS00585 0.80 +0.4 134,258 - LRK53_RS00585 0.80 +0.2 134,258 - LRK53_RS00585 0.80 +1.0 134,258 - LRK53_RS00585 0.80 +1.0 134,353 + -0.3 134,440 + -0.0 134,440 + -0.6
Or see this region's nucleotide sequence