Experiment: G1M1_D11
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_06585 and HUW76_06590 are separated by 267 nucleotides HUW76_06590 and HUW76_06595 are separated by 0 nucleotides HUW76_06595 and HUW76_06600 are separated by 2 nucleotides HUW76_06600 and HUW76_06605 are separated by 109 nucleotides
HUW76_06585: HUW76_06585 - L-lactate dehydrogenase, at 1,368,453 to 1,369,409
_06585
HUW76_06590: HUW76_06590 - 50S ribosomal protein L27, at 1,369,677 to 1,369,961
_06590
HUW76_06595: HUW76_06595 - ribosomal-processing cysteine protease Prp, at 1,369,962 to 1,370,291
_06595
HUW76_06600: HUW76_06600 - 50S ribosomal protein L21, at 1,370,294 to 1,370,608
_06600
HUW76_06605: HUW76_06605 - Type 1 glutamine amidotransferase-like domain-containing protein, at 1,370,718 to 1,371,329
_06605
Position (kb) 1369
1370
1371 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1368.963 kb on + strand, within HUW76_06585 at 1368.963 kb on + strand, within HUW76_06585 at 1368.963 kb on + strand, within HUW76_06585 at 1368.963 kb on + strand, within HUW76_06585 at 1368.963 kb on + strand, within HUW76_06585 at 1368.963 kb on + strand, within HUW76_06585 at 1368.963 kb on + strand, within HUW76_06585 at 1368.963 kb on + strand, within HUW76_06585 at 1368.971 kb on - strand, within HUW76_06585 at 1368.971 kb on - strand, within HUW76_06585 at 1368.971 kb on - strand, within HUW76_06585 at 1368.971 kb on - strand, within HUW76_06585 at 1368.971 kb on - strand, within HUW76_06585 at 1368.971 kb on - strand, within HUW76_06585 at 1368.996 kb on - strand, within HUW76_06585 at 1369.014 kb on - strand, within HUW76_06585 at 1369.104 kb on + strand, within HUW76_06585 at 1369.104 kb on + strand, within HUW76_06585 at 1369.112 kb on - strand, within HUW76_06585 at 1369.115 kb on + strand, within HUW76_06585 at 1369.115 kb on + strand, within HUW76_06585 at 1369.123 kb on - strand, within HUW76_06585 at 1369.123 kb on - strand, within HUW76_06585 at 1369.128 kb on + strand, within HUW76_06585 at 1369.232 kb on - strand, within HUW76_06585 at 1369.303 kb on - strand, within HUW76_06585 at 1369.324 kb on + strand at 1369.338 kb on - strand at 1369.567 kb on - strand at 1369.567 kb on - strand at 1370.294 kb on - strand at 1370.631 kb on - strand at 1370.631 kb on - strand at 1370.672 kb on - strand at 1370.753 kb on + strand at 1370.754 kb on + strand at 1370.754 kb on + strand at 1370.847 kb on + strand, within HUW76_06605 at 1370.847 kb on + strand, within HUW76_06605 at 1370.936 kb on + strand, within HUW76_06605 at 1370.945 kb on + strand, within HUW76_06605 at 1370.975 kb on - strand, within HUW76_06605 at 1370.975 kb on - strand, within HUW76_06605 at 1370.982 kb on + strand, within HUW76_06605 at 1370.988 kb on - strand, within HUW76_06605 at 1370.988 kb on - strand, within HUW76_06605 at 1371.067 kb on - strand, within HUW76_06605 at 1371.147 kb on + strand, within HUW76_06605 at 1371.275 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction G1M1_D11 remove 1,368,963 + HUW76_06585 0.53 -1.5 1,368,963 + HUW76_06585 0.53 -0.1 1,368,963 + HUW76_06585 0.53 -0.3 1,368,963 + HUW76_06585 0.53 +0.3 1,368,963 + HUW76_06585 0.53 -2.3 1,368,963 + HUW76_06585 0.53 +0.9 1,368,963 + HUW76_06585 0.53 +0.8 1,368,963 + HUW76_06585 0.53 -1.0 1,368,971 - HUW76_06585 0.54 -0.5 1,368,971 - HUW76_06585 0.54 +0.4 1,368,971 - HUW76_06585 0.54 +0.5 1,368,971 - HUW76_06585 0.54 -1.0 1,368,971 - HUW76_06585 0.54 -0.8 1,368,971 - HUW76_06585 0.54 -1.1 1,368,996 - HUW76_06585 0.57 +0.4 1,369,014 - HUW76_06585 0.59 -0.8 1,369,104 + HUW76_06585 0.68 +0.8 1,369,104 + HUW76_06585 0.68 +0.6 1,369,112 - HUW76_06585 0.69 -0.7 1,369,115 + HUW76_06585 0.69 +0.7 1,369,115 + HUW76_06585 0.69 +1.9 1,369,123 - HUW76_06585 0.70 +0.9 1,369,123 - HUW76_06585 0.70 -0.3 1,369,128 + HUW76_06585 0.71 +1.5 1,369,232 - HUW76_06585 0.81 +0.1 1,369,303 - HUW76_06585 0.89 -0.1 1,369,324 + -2.3 1,369,338 - -1.3 1,369,567 - +1.2 1,369,567 - -3.1 1,370,294 - -2.9 1,370,631 - -2.5 1,370,631 - +0.2 1,370,672 - -0.2 1,370,753 + +0.0 1,370,754 + -2.3 1,370,754 + -0.5 1,370,847 + HUW76_06605 0.21 +1.6 1,370,847 + HUW76_06605 0.21 -0.2 1,370,936 + HUW76_06605 0.36 -0.8 1,370,945 + HUW76_06605 0.37 +2.1 1,370,975 - HUW76_06605 0.42 +0.4 1,370,975 - HUW76_06605 0.42 -0.4 1,370,982 + HUW76_06605 0.43 -0.5 1,370,988 - HUW76_06605 0.44 +2.0 1,370,988 - HUW76_06605 0.44 +1.3 1,371,067 - HUW76_06605 0.57 -0.7 1,371,147 + HUW76_06605 0.70 +2.9 1,371,275 + -0.1
Or see this region's nucleotide sequence