Experiment: G1M1_D11
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_04405 and HUW76_04410 are separated by 66 nucleotides HUW76_04410 and HUW76_04415 are separated by 16 nucleotides HUW76_04415 and HUW76_04420 overlap by 14 nucleotides HUW76_04420 and HUW76_04425 overlap by 4 nucleotides
HUW76_04405: HUW76_04405 - murein biosynthesis integral membrane protein MurJ, at 889,630 to 891,099
_04405
HUW76_04410: HUW76_04410 - hypothetical protein, at 891,166 to 891,843
_04410
HUW76_04415: HUW76_04415 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC, at 891,860 to 893,080
_04415
HUW76_04420: HUW76_04420 - chromate transporter, at 893,067 to 893,627
_04420
HUW76_04425: HUW76_04425 - chromate transporter, at 893,624 to 894,154
_04425
Position (kb) 891
892
893
894 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 891.046 kb on + strand at 891.169 kb on + strand at 891.169 kb on + strand at 891.280 kb on + strand, within HUW76_04410 at 891.281 kb on + strand, within HUW76_04410 at 891.281 kb on + strand, within HUW76_04410 at 891.765 kb on + strand, within HUW76_04410 at 891.765 kb on + strand, within HUW76_04410 at 891.784 kb on + strand at 891.819 kb on + strand at 891.819 kb on + strand at 893.135 kb on + strand, within HUW76_04420 at 893.148 kb on - strand, within HUW76_04420 at 893.148 kb on - strand, within HUW76_04420 at 893.194 kb on + strand, within HUW76_04420 at 893.213 kb on + strand, within HUW76_04420 at 893.220 kb on + strand, within HUW76_04420 at 893.220 kb on + strand, within HUW76_04420 at 893.239 kb on - strand, within HUW76_04420 at 893.244 kb on - strand, within HUW76_04420 at 893.272 kb on - strand, within HUW76_04420 at 893.274 kb on + strand, within HUW76_04420 at 893.276 kb on + strand, within HUW76_04420 at 893.276 kb on + strand, within HUW76_04420 at 893.284 kb on - strand, within HUW76_04420 at 893.358 kb on + strand, within HUW76_04420 at 893.358 kb on + strand, within HUW76_04420 at 893.421 kb on - strand, within HUW76_04420 at 893.421 kb on - strand, within HUW76_04420 at 893.422 kb on - strand, within HUW76_04420 at 893.422 kb on - strand, within HUW76_04420 at 893.427 kb on - strand, within HUW76_04420 at 893.427 kb on - strand, within HUW76_04420 at 893.466 kb on - strand, within HUW76_04420 at 893.466 kb on - strand, within HUW76_04420 at 893.576 kb on - strand at 893.576 kb on - strand at 893.658 kb on + strand at 893.658 kb on + strand at 893.688 kb on + strand, within HUW76_04425 at 893.688 kb on + strand, within HUW76_04425 at 893.696 kb on - strand, within HUW76_04425 at 893.708 kb on - strand, within HUW76_04425 at 893.708 kb on - strand, within HUW76_04425 at 893.718 kb on + strand, within HUW76_04425 at 893.718 kb on + strand, within HUW76_04425 at 893.824 kb on + strand, within HUW76_04425 at 893.824 kb on + strand, within HUW76_04425 at 893.824 kb on + strand, within HUW76_04425 at 893.832 kb on - strand, within HUW76_04425 at 893.832 kb on - strand, within HUW76_04425 at 893.832 kb on - strand, within HUW76_04425 at 893.832 kb on - strand, within HUW76_04425 at 893.832 kb on - strand, within HUW76_04425 at 893.842 kb on - strand, within HUW76_04425 at 893.847 kb on + strand, within HUW76_04425 at 893.871 kb on + strand, within HUW76_04425 at 893.914 kb on - strand, within HUW76_04425 at 893.914 kb on - strand, within HUW76_04425 at 893.914 kb on - strand, within HUW76_04425 at 893.961 kb on + strand, within HUW76_04425 at 893.968 kb on - strand, within HUW76_04425 at 893.981 kb on - strand, within HUW76_04425 at 893.981 kb on - strand, within HUW76_04425 at 894.062 kb on + strand, within HUW76_04425
Per-strain Table
Position Strand Gene LocusTag Fraction G1M1_D11 remove 891,046 + -1.6 891,169 + -2.1 891,169 + -2.9 891,280 + HUW76_04410 0.17 -3.0 891,281 + HUW76_04410 0.17 -2.0 891,281 + HUW76_04410 0.17 -2.0 891,765 + HUW76_04410 0.88 -1.4 891,765 + HUW76_04410 0.88 -1.6 891,784 + -3.0 891,819 + -1.4 891,819 + -0.5 893,135 + HUW76_04420 0.12 -2.2 893,148 - HUW76_04420 0.14 -0.7 893,148 - HUW76_04420 0.14 -1.2 893,194 + HUW76_04420 0.23 -1.2 893,213 + HUW76_04420 0.26 +0.5 893,220 + HUW76_04420 0.27 -0.0 893,220 + HUW76_04420 0.27 +0.7 893,239 - HUW76_04420 0.31 -0.9 893,244 - HUW76_04420 0.32 -0.1 893,272 - HUW76_04420 0.37 -1.6 893,274 + HUW76_04420 0.37 +0.8 893,276 + HUW76_04420 0.37 +3.6 893,276 + HUW76_04420 0.37 +0.7 893,284 - HUW76_04420 0.39 -0.9 893,358 + HUW76_04420 0.52 +0.3 893,358 + HUW76_04420 0.52 -2.2 893,421 - HUW76_04420 0.63 +0.4 893,421 - HUW76_04420 0.63 +3.0 893,422 - HUW76_04420 0.63 -0.6 893,422 - HUW76_04420 0.63 -0.3 893,427 - HUW76_04420 0.64 -1.2 893,427 - HUW76_04420 0.64 -1.7 893,466 - HUW76_04420 0.71 -0.8 893,466 - HUW76_04420 0.71 -2.2 893,576 - +1.8 893,576 - -1.1 893,658 + -0.1 893,658 + -1.9 893,688 + HUW76_04425 0.12 -0.7 893,688 + HUW76_04425 0.12 -3.4 893,696 - HUW76_04425 0.14 -0.9 893,708 - HUW76_04425 0.16 -1.0 893,708 - HUW76_04425 0.16 -0.4 893,718 + HUW76_04425 0.18 -2.6 893,718 + HUW76_04425 0.18 -1.6 893,824 + HUW76_04425 0.38 -0.8 893,824 + HUW76_04425 0.38 -1.9 893,824 + HUW76_04425 0.38 -2.4 893,832 - HUW76_04425 0.39 -1.8 893,832 - HUW76_04425 0.39 +1.2 893,832 - HUW76_04425 0.39 -2.5 893,832 - HUW76_04425 0.39 -0.2 893,832 - HUW76_04425 0.39 +0.7 893,842 - HUW76_04425 0.41 +1.1 893,847 + HUW76_04425 0.42 -1.5 893,871 + HUW76_04425 0.47 -2.6 893,914 - HUW76_04425 0.55 +0.0 893,914 - HUW76_04425 0.55 -0.1 893,914 - HUW76_04425 0.55 +0.5 893,961 + HUW76_04425 0.63 -1.8 893,968 - HUW76_04425 0.65 +0.1 893,981 - HUW76_04425 0.67 -2.7 893,981 - HUW76_04425 0.67 +0.5 894,062 + HUW76_04425 0.82 +1.1
Or see this region's nucleotide sequence