Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK53_RS15055 and LRK53_RS15060 are separated by 91 nucleotides LRK53_RS15060 and LRK53_RS15065 overlap by 4 nucleotides
LRK53_RS15055: LRK53_RS15055 - flagellar hook-length control protein FliK, at 3,289,217 to 3,290,317
_RS15055
LRK53_RS15060: LRK53_RS15060 - flagellar export protein FliJ, at 3,290,409 to 3,290,834
_RS15060
LRK53_RS15065: LRK53_RS15065 - flagellar protein export ATPase FliI, at 3,290,831 to 3,292,138
_RS15065
Position (kb)
3290
3291 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3289.667 kb on + strand, within LRK53_RS15055 at 3289.727 kb on + strand, within LRK53_RS15055 at 3289.727 kb on + strand, within LRK53_RS15055 at 3289.727 kb on + strand, within LRK53_RS15055 at 3289.728 kb on - strand, within LRK53_RS15055 at 3289.728 kb on - strand, within LRK53_RS15055 at 3289.728 kb on - strand, within LRK53_RS15055 at 3289.728 kb on - strand, within LRK53_RS15055 at 3289.728 kb on - strand, within LRK53_RS15055 at 3289.728 kb on - strand, within LRK53_RS15055 at 3290.055 kb on - strand, within LRK53_RS15055 at 3290.426 kb on - strand at 3290.686 kb on + strand, within LRK53_RS15060 at 3290.687 kb on - strand, within LRK53_RS15060 at 3290.979 kb on + strand, within LRK53_RS15065 at 3291.024 kb on + strand, within LRK53_RS15065 at 3291.024 kb on + strand, within LRK53_RS15065 at 3291.024 kb on + strand, within LRK53_RS15065 at 3291.025 kb on - strand, within LRK53_RS15065 at 3291.025 kb on - strand, within LRK53_RS15065 at 3291.207 kb on + strand, within LRK53_RS15065 at 3291.234 kb on + strand, within LRK53_RS15065 at 3291.234 kb on + strand, within LRK53_RS15065 at 3291.235 kb on - strand, within LRK53_RS15065 at 3291.456 kb on + strand, within LRK53_RS15065 at 3291.457 kb on - strand, within LRK53_RS15065 at 3291.618 kb on + strand, within LRK53_RS15065 at 3291.618 kb on + strand, within LRK53_RS15065 at 3291.619 kb on - strand, within LRK53_RS15065
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Metal_ion_mix_sitestressplate 2 x remove 3,289,667 + LRK53_RS15055 0.41 +1.0 3,289,727 + LRK53_RS15055 0.46 -0.9 3,289,727 + LRK53_RS15055 0.46 -0.0 3,289,727 + LRK53_RS15055 0.46 -0.9 3,289,728 - LRK53_RS15055 0.46 +1.0 3,289,728 - LRK53_RS15055 0.46 -0.2 3,289,728 - LRK53_RS15055 0.46 +0.2 3,289,728 - LRK53_RS15055 0.46 +0.2 3,289,728 - LRK53_RS15055 0.46 +2.0 3,289,728 - LRK53_RS15055 0.46 -1.0 3,290,055 - LRK53_RS15055 0.76 -1.4 3,290,426 - +1.0 3,290,686 + LRK53_RS15060 0.65 -0.6 3,290,687 - LRK53_RS15060 0.65 -1.6 3,290,979 + LRK53_RS15065 0.11 -1.6 3,291,024 + LRK53_RS15065 0.15 +0.5 3,291,024 + LRK53_RS15065 0.15 -1.9 3,291,024 + LRK53_RS15065 0.15 -0.6 3,291,025 - LRK53_RS15065 0.15 -0.0 3,291,025 - LRK53_RS15065 0.15 -2.4 3,291,207 + LRK53_RS15065 0.29 -0.2 3,291,234 + LRK53_RS15065 0.31 -0.0 3,291,234 + LRK53_RS15065 0.31 +1.0 3,291,235 - LRK53_RS15065 0.31 +1.0 3,291,456 + LRK53_RS15065 0.48 -1.4 3,291,457 - LRK53_RS15065 0.48 +0.1 3,291,618 + LRK53_RS15065 0.60 -0.5 3,291,618 + LRK53_RS15065 0.60 -1.0 3,291,619 - LRK53_RS15065 0.60 +1.5
Or see this region's nucleotide sequence