Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07425
Experiment: R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | R2A_PIPES with Metal_ion_mix_sitestressplate 2 x |
|---|---|---|---|---|---|
| remove | |||||
| 1,661,426 | + | LRK53_RS07420 | 0.43 | -0.3 | |
| 1,661,426 | + | LRK53_RS07420 | 0.43 | +0.0 | |
| 1,661,426 | + | LRK53_RS07420 | 0.43 | -1.6 | |
| 1,661,427 | - | LRK53_RS07420 | 0.43 | +0.4 | |
| 1,661,427 | - | LRK53_RS07420 | 0.43 | -1.6 | |
| 1,661,427 | - | LRK53_RS07420 | 0.43 | -0.6 | |
| 1,661,560 | + | LRK53_RS07420 | 0.53 | +1.7 | |
| 1,661,560 | + | LRK53_RS07420 | 0.53 | -1.3 | |
| 1,661,560 | + | LRK53_RS07420 | 0.53 | -0.6 | |
| 1,661,561 | - | LRK53_RS07420 | 0.53 | -0.6 | |
| 1,661,896 | + | LRK53_RS07420 | 0.77 | -3.1 | |
| 1,662,382 | + | LRK53_RS07425 | 0.17 | +0.0 | |
| 1,662,382 | + | LRK53_RS07425 | 0.17 | -1.7 | |
| 1,662,382 | + | LRK53_RS07425 | 0.17 | -1.1 | |
| 1,662,382 | + | LRK53_RS07425 | 0.17 | -0.4 | |
| 1,662,383 | - | LRK53_RS07425 | 0.17 | -1.3 | |
| 1,662,383 | - | LRK53_RS07425 | 0.17 | -1.0 | |
| 1,662,383 | - | LRK53_RS07425 | 0.17 | -1.4 | |
| 1,662,383 | - | LRK53_RS07425 | 0.17 | +0.0 | |
| 1,662,383 | - | LRK53_RS07425 | 0.17 | -1.0 | |
| 1,663,009 | + | +1.0 | |||
| 1,663,010 | - | -0.3 | |||
| 1,663,010 | - | -1.8 | |||
| 1,663,111 | + | -0.7 | |||
| 1,663,112 | - | -1.3 |
Or see this region's nucleotide sequence