Strain Fitness in Escherichia coli ECRC98 around JDDGAC_25650

Experiment: Bas69

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas69
4,900,116	+		JDDGAC_25645	0.63	-0.1
4,900,189	+		JDDGAC_25645	0.66	+3.0
4,900,195	+		JDDGAC_25645	0.66	+1.4
4,900,246	+		JDDGAC_25645	0.68	+1.4
4,900,247	-		JDDGAC_25645	0.68	+2.4
4,900,253	+		JDDGAC_25645	0.68	+2.3
4,900,343	+		JDDGAC_25645	0.72	+1.6
4,900,344	-		JDDGAC_25645	0.72	+0.8
4,900,351	+		JDDGAC_25645	0.72	-0.9
4,900,385	+		JDDGAC_25645	0.73	+2.1
4,900,385	+		JDDGAC_25645	0.73	+0.7
4,900,385	+		JDDGAC_25645	0.73	-0.0
4,900,386	-		JDDGAC_25645	0.73	+1.6
4,900,386	-		JDDGAC_25645	0.73	+0.9
4,900,386	-		JDDGAC_25645	0.73	+3.0
4,900,387	+		JDDGAC_25645	0.73	+2.5
4,900,387	+		JDDGAC_25645	0.73	+1.5
4,900,387	+		JDDGAC_25645	0.73	+0.8
4,900,387	+		JDDGAC_25645	0.73	+2.8
4,900,387	+		JDDGAC_25645	0.73	+2.3
4,900,388	-		JDDGAC_25645	0.74	+2.3
4,900,388	-		JDDGAC_25645	0.74	+2.2
4,900,388	-		JDDGAC_25645	0.74	+1.6
4,900,399	-		JDDGAC_25645	0.74	+1.5
4,900,579	+		JDDGAC_25645	0.81	+2.5
4,900,592	-		JDDGAC_25645	0.82	+2.0
4,900,673	+		JDDGAC_25645	0.85	+2.2
4,900,691	+		JDDGAC_25645	0.86	+0.2
4,900,692	-		JDDGAC_25645	0.86	+0.5
4,900,694	+		JDDGAC_25645	0.86	+0.7
4,900,694	+		JDDGAC_25645	0.86	+2.5
4,900,695	-		JDDGAC_25645	0.86	+3.2
4,900,695	-		JDDGAC_25645	0.86	+1.8
4,900,695	-		JDDGAC_25645	0.86	+1.7
4,900,695	-		JDDGAC_25645	0.86	+1.7
4,900,695	-		JDDGAC_25645	0.86	+1.0
4,900,726	-		JDDGAC_25645	0.87	+0.2
4,900,747	+		JDDGAC_25645	0.88	+0.7
4,900,770	+		JDDGAC_25645	0.89	+3.1
4,900,771	-		JDDGAC_25645	0.89	+2.2
4,900,771	-		JDDGAC_25645	0.89	+1.0
4,900,771	-		JDDGAC_25645	0.89	+1.0
4,900,774	+		JDDGAC_25645	0.89	+1.4
4,900,775	-		JDDGAC_25645	0.89	+2.8
4,900,793	+		JDDGAC_25645	0.90	+1.6
4,900,793	+		JDDGAC_25645	0.90	+1.2
4,900,794	-		JDDGAC_25645	0.90	+0.7
4,900,964	-				+0.7
4,900,971	-				+0.9
4,900,977	+				+2.9
4,901,041	+				+3.1
4,901,108	+				+0.5
4,901,109	-				+2.0
4,901,124	+				-0.3
4,901,213	+				+1.0
4,901,214	-				+1.6
4,901,296	+		JDDGAC_25650	0.14	+2.4
4,901,297	-		JDDGAC_25650	0.14	+1.9
4,901,297	-		JDDGAC_25650	0.14	+2.2
4,901,297	-		JDDGAC_25650	0.14	+2.3
4,901,543	+		JDDGAC_25650	0.27	+1.9
4,901,554	-		JDDGAC_25650	0.28	+1.2
4,901,556	+		JDDGAC_25650	0.28	+1.2
4,901,556	+		JDDGAC_25650	0.28	+2.5
4,901,687	+		JDDGAC_25650	0.35	+1.8
4,901,687	+		JDDGAC_25650	0.35	+1.3
4,901,688	-		JDDGAC_25650	0.35	+1.5
4,901,688	-		JDDGAC_25650	0.35	+0.4
4,901,722	-		JDDGAC_25650	0.37	+0.3
4,901,727	+		JDDGAC_25650	0.38	+2.5
4,901,785	+		JDDGAC_25650	0.41	+1.6
4,901,785	+		JDDGAC_25650	0.41	+1.3
4,901,806	+		JDDGAC_25650	0.42	+1.7
4,901,807	-		JDDGAC_25650	0.42	+1.3
4,901,807	-		JDDGAC_25650	0.42	+1.6
4,901,807	-		JDDGAC_25650	0.42	+1.4
4,901,835	+		JDDGAC_25650	0.44	+0.3
4,901,836	-		JDDGAC_25650	0.44	+2.3
4,901,880	+		JDDGAC_25650	0.46	-0.6
4,901,884	-		JDDGAC_25650	0.46	+1.4
4,902,045	+		JDDGAC_25650	0.55	+0.6
4,902,045	+		JDDGAC_25650	0.55	+1.9
4,902,046	-		JDDGAC_25650	0.55	+1.9
4,902,074	+		JDDGAC_25650	0.57	-0.3
4,902,074	+		JDDGAC_25650	0.57	+1.0
4,902,074	+		JDDGAC_25650	0.57	-0.6
4,902,075	-		JDDGAC_25650	0.57	+0.8
4,902,075	-		JDDGAC_25650	0.57	+0.6
4,902,150	+		JDDGAC_25650	0.61	+1.9
4,902,170	+		JDDGAC_25650	0.62	+0.4
4,902,170	+		JDDGAC_25650	0.62	+1.7
4,902,171	-		JDDGAC_25650	0.62	+2.0
4,902,171	-		JDDGAC_25650	0.62	-0.2
4,902,197	+		JDDGAC_25650	0.64	+1.4
4,902,197	+		JDDGAC_25650	0.64	+1.4
4,902,447	+		JDDGAC_25650	0.77	+1.8
4,902,522	-		JDDGAC_25650	0.82	+2.0
4,902,559	-		JDDGAC_25650	0.84	+1.3
4,902,590	+		JDDGAC_25650	0.85	+1.2
4,902,591	-		JDDGAC_25650	0.85	+1.6
4,902,591	-		JDDGAC_25650	0.85	-0.1
4,902,614	+		JDDGAC_25650	0.87	+1.7
4,902,660	+		JDDGAC_25650	0.89	+0.8
4,902,661	-		JDDGAC_25650	0.89	+1.6
4,902,710	+				-1.1
4,902,710	+				+1.5
4,902,711	-				+1.9
4,902,711	-				+0.9
4,902,715	-				-1.4
4,902,715	-				+1.8
4,902,735	+				+0.7
4,902,735	+				+2.3
4,902,736	-				+2.2
4,902,764	+				+2.1
4,902,872	+				+1.5
4,902,872	+				+2.7
4,902,873	-				+2.0
4,902,873	-				+1.2
4,902,874	+				+2.1
4,902,874	+				+2.0
4,902,874	+				+1.4
4,902,874	+				+2.2
4,902,874	+				+1.3
4,902,922	+				+2.6
4,903,016	-				+3.2
4,903,017	+				+2.4
4,903,049	-				+2.2
4,903,091	+				+1.8
4,903,091	+				+0.7
4,903,091	+				+2.1
4,903,122	-		JDDGAC_25655	0.11	-1.0
4,903,127	+		JDDGAC_25655	0.11	+1.3
4,903,127	+		JDDGAC_25655	0.11	+2.8
4,903,127	+		JDDGAC_25655	0.11	+2.3
4,903,127	+		JDDGAC_25655	0.11	-1.3
4,903,127	+		JDDGAC_25655	0.11	+2.2
4,903,128	-		JDDGAC_25655	0.11	+3.0
4,903,131	+		JDDGAC_25655	0.11	+1.2
4,903,132	-		JDDGAC_25655	0.11	+1.9
4,903,132	-		JDDGAC_25655	0.11	+0.4
4,903,132	-		JDDGAC_25655	0.11	+0.8
4,903,132	-		JDDGAC_25655	0.11	+1.5
4,903,132	-		JDDGAC_25655	0.11	+3.0
4,903,169	+		JDDGAC_25655	0.13	+1.8
4,903,172	+		JDDGAC_25655	0.13	+0.5
4,903,173	-		JDDGAC_25655	0.13	-0.1
4,903,182	-		JDDGAC_25655	0.13	+0.8
4,903,194	-		JDDGAC_25655	0.14	+1.0
4,903,333	+		JDDGAC_25655	0.19	+1.2
4,903,333	+		JDDGAC_25655	0.19	+2.6
4,903,333	+		JDDGAC_25655	0.19	+2.4
4,903,333	+		JDDGAC_25655	0.19	+1.1
4,903,334	-		JDDGAC_25655	0.19	+0.7
4,903,336	-		JDDGAC_25655	0.19	+1.4
4,903,336	-		JDDGAC_25655	0.19	+1.3
4,903,336	-		JDDGAC_25655	0.19	+2.2
4,903,356	-		JDDGAC_25655	0.20	+0.7
4,903,356	-		JDDGAC_25655	0.20	+1.2
4,903,386	-		JDDGAC_25655	0.21	+0.8
4,903,411	+		JDDGAC_25655	0.22	+1.9
4,903,453	-		JDDGAC_25655	0.24	+1.3
4,903,487	+		JDDGAC_25655	0.25	+1.8
4,903,487	+		JDDGAC_25655	0.25	+1.8
4,903,517	+		JDDGAC_25655	0.27	+1.0
4,903,517	+		JDDGAC_25655	0.27	+2.2
4,903,518	-		JDDGAC_25655	0.27	-1.1
4,903,535	+		JDDGAC_25655	0.27	+0.7
4,903,537	+		JDDGAC_25655	0.27	+3.7
4,903,538	-		JDDGAC_25655	0.27	+1.8
4,903,538	-		JDDGAC_25655	0.27	+4.1
4,903,538	-		JDDGAC_25655	0.27	+2.1
4,903,538	-		JDDGAC_25655	0.27	+1.3
4,903,538	-		JDDGAC_25655	0.27	+2.1
4,903,541	+		JDDGAC_25655	0.28	+0.8
4,903,541	+		JDDGAC_25655	0.28	+1.4
4,903,557	+		JDDGAC_25655	0.28	+2.3
4,903,557	+		JDDGAC_25655	0.28	+1.3
4,903,557	+		JDDGAC_25655	0.28	+2.1
4,903,558	-		JDDGAC_25655	0.28	+3.3
4,903,623	+		JDDGAC_25655	0.31	+1.7
4,903,623	+		JDDGAC_25655	0.31	+1.3
4,903,623	+		JDDGAC_25655	0.31	-1.0
4,903,623	+		JDDGAC_25655	0.31	+2.8
4,903,624	-		JDDGAC_25655	0.31	+0.9
4,903,624	-		JDDGAC_25655	0.31	+3.1
4,903,625	+		JDDGAC_25655	0.31	+1.7
4,903,638	-		JDDGAC_25655	0.32	+1.8
4,903,653	-		JDDGAC_25655	0.32	+1.3
4,903,658	+		JDDGAC_25655	0.32	-0.8
4,903,659	-		JDDGAC_25655	0.32	+2.4
4,903,721	-		JDDGAC_25655	0.35	+2.6
4,903,752	+		JDDGAC_25655	0.36	+0.3
4,903,824	-		JDDGAC_25655	0.39	+3.3
4,903,842	+		JDDGAC_25655	0.40	+1.8
4,903,842	+		JDDGAC_25655	0.40	+0.1
4,903,842	+		JDDGAC_25655	0.40	-0.4