Strain Fitness in Escherichia coli ECRC98 around JDDGAC_25645

Experiment: Bas69

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas69
4,897,606	-		JDDGAC_25635	0.16	+0.8
4,897,618	+		JDDGAC_25635	0.19	+2.7
4,897,619	-		JDDGAC_25635	0.19	+0.1
4,897,639	-		JDDGAC_25635	0.23	+2.6
4,897,773	-		JDDGAC_25635	0.52	+2.0
4,897,773	-		JDDGAC_25635	0.52	+1.6
4,897,795	+		JDDGAC_25635	0.57	+0.7
4,897,796	-		JDDGAC_25635	0.57	+1.5
4,897,829	+		JDDGAC_25635	0.64	+1.3
4,897,870	+		JDDGAC_25635	0.73	+0.6
4,897,962	+				+1.3
4,898,052	+		JDDGAC_25640	0.10	+1.0
4,898,052	+		JDDGAC_25640	0.10	+1.8
4,898,053	-		JDDGAC_25640	0.11	+2.0
4,898,077	-		JDDGAC_25640	0.15	+2.7
4,898,108	+		JDDGAC_25640	0.21	+2.2
4,898,109	-		JDDGAC_25640	0.21	+0.2
4,898,111	-		JDDGAC_25640	0.21	+2.2
4,898,195	+		JDDGAC_25640	0.37	+3.3
4,898,234	-		JDDGAC_25640	0.44	+2.3
4,898,234	-		JDDGAC_25640	0.44	+2.2
4,898,243	+		JDDGAC_25640	0.45	+1.5
4,898,256	-		JDDGAC_25640	0.48	+1.7
4,898,257	+		JDDGAC_25640	0.48	+1.8
4,898,257	+		JDDGAC_25640	0.48	+2.4
4,898,310	-		JDDGAC_25640	0.58	+1.7
4,898,334	+		JDDGAC_25640	0.62	+3.0
4,898,355	+		JDDGAC_25640	0.66	+2.8
4,898,356	-		JDDGAC_25640	0.66	+1.6
4,898,356	-		JDDGAC_25640	0.66	+1.3
4,898,436	+		JDDGAC_25640	0.81	+1.4
4,898,446	-		JDDGAC_25640	0.83	+1.5
4,898,537	-				+0.9
4,898,537	-				+1.9
4,898,538	+				+1.7
4,898,539	-				+1.0
4,898,539	-				+1.7
4,898,539	-				+2.0
4,898,626	+				+2.4
4,898,626	+				+2.8
4,898,626	+				+1.2
4,898,627	-				+0.7
4,898,739	+				+0.3
4,898,740	-				+1.7
4,898,819	+		JDDGAC_25645	0.11	+0.9
4,898,822	-		JDDGAC_25645	0.11	+2.5
4,898,857	+		JDDGAC_25645	0.13	+1.7
4,898,858	-		JDDGAC_25645	0.13	+0.1
4,898,884	+		JDDGAC_25645	0.14	+2.5
4,898,929	+		JDDGAC_25645	0.15	+2.9
4,898,929	+		JDDGAC_25645	0.15	-0.3
4,898,953	-		JDDGAC_25645	0.16	+1.6
4,898,953	-		JDDGAC_25645	0.16	-0.8
4,899,011	-		JDDGAC_25645	0.19	+2.0
4,899,029	+		JDDGAC_25645	0.19	-0.9
4,899,030	-		JDDGAC_25645	0.19	+2.6
4,899,030	-		JDDGAC_25645	0.19	+0.2
4,899,047	+		JDDGAC_25645	0.20	+2.2
4,899,048	-		JDDGAC_25645	0.20	+1.1
4,899,048	-		JDDGAC_25645	0.20	+1.8
4,899,051	+		JDDGAC_25645	0.20	-0.8
4,899,090	-		JDDGAC_25645	0.22	+2.3
4,899,226	-		JDDGAC_25645	0.27	+1.8
4,899,232	+		JDDGAC_25645	0.28	-0.6
4,899,258	+		JDDGAC_25645	0.29	-0.0
4,899,259	-		JDDGAC_25645	0.29	+1.9
4,899,266	-		JDDGAC_25645	0.29	+1.3
4,899,266	-		JDDGAC_25645	0.29	+1.9
4,899,304	+		JDDGAC_25645	0.30	+2.1
4,899,305	-		JDDGAC_25645	0.30	+1.9
4,899,323	+		JDDGAC_25645	0.31	-0.4
4,899,323	+		JDDGAC_25645	0.31	+3.2
4,899,377	-		JDDGAC_25645	0.33	+1.8
4,899,432	-		JDDGAC_25645	0.35	-0.0
4,899,451	+		JDDGAC_25645	0.36	+0.9
4,899,466	-		JDDGAC_25645	0.37	+3.4
4,899,505	+		JDDGAC_25645	0.38	+2.5
4,899,505	+		JDDGAC_25645	0.38	+1.6
4,899,506	-		JDDGAC_25645	0.38	+0.9
4,899,506	-		JDDGAC_25645	0.38	+1.8
4,899,506	-		JDDGAC_25645	0.38	+2.3
4,899,506	-		JDDGAC_25645	0.38	+1.1
4,899,512	+		JDDGAC_25645	0.39	+2.1
4,899,513	-		JDDGAC_25645	0.39	+1.9
4,899,572	-		JDDGAC_25645	0.41	-1.8
4,899,572	-		JDDGAC_25645	0.41	+2.4
4,899,572	-		JDDGAC_25645	0.41	+2.0
4,899,636	-		JDDGAC_25645	0.44	+1.3
4,899,651	+		JDDGAC_25645	0.44	+1.2
4,899,652	-		JDDGAC_25645	0.44	-1.0
4,899,710	+		JDDGAC_25645	0.47	+1.5
4,899,710	+		JDDGAC_25645	0.47	+2.7
4,899,711	-		JDDGAC_25645	0.47	-0.4
4,899,763	+		JDDGAC_25645	0.49	+1.7
4,899,807	-		JDDGAC_25645	0.50	+2.6
4,899,808	+		JDDGAC_25645	0.50	+3.5
4,899,809	-		JDDGAC_25645	0.50	-0.7
4,899,809	-		JDDGAC_25645	0.50	+2.0
4,899,851	+		JDDGAC_25645	0.52	-1.0
4,899,851	+		JDDGAC_25645	0.52	+1.7
4,899,852	-		JDDGAC_25645	0.52	+1.4
4,899,852	-		JDDGAC_25645	0.52	+1.7
4,899,852	-		JDDGAC_25645	0.52	+1.6
4,899,854	-		JDDGAC_25645	0.52	+1.8
4,899,898	+		JDDGAC_25645	0.54	+1.3
4,899,916	-		JDDGAC_25645	0.55	+2.0
4,899,916	-		JDDGAC_25645	0.55	+1.1
4,899,937	+		JDDGAC_25645	0.56	-2.0
4,899,937	+		JDDGAC_25645	0.56	+2.2
4,899,937	+		JDDGAC_25645	0.56	+2.1
4,899,953	-		JDDGAC_25645	0.56	+0.5
4,899,953	-		JDDGAC_25645	0.56	+1.3
4,899,971	+		JDDGAC_25645	0.57	+0.4
4,899,971	+		JDDGAC_25645	0.57	+2.3
4,899,972	-		JDDGAC_25645	0.57	+2.4
4,899,972	-		JDDGAC_25645	0.57	+2.5
4,899,972	-		JDDGAC_25645	0.57	+1.0
4,899,972	-		JDDGAC_25645	0.57	-0.4
4,899,973	+		JDDGAC_25645	0.57	+2.2
4,899,974	-		JDDGAC_25645	0.57	+1.6
4,899,974	-		JDDGAC_25645	0.57	+2.6
4,899,975	+		JDDGAC_25645	0.57	+0.4
4,899,975	+		JDDGAC_25645	0.57	+3.2
4,899,975	+		JDDGAC_25645	0.57	+1.4
4,899,975	+		JDDGAC_25645	0.57	+1.1
4,899,975	+		JDDGAC_25645	0.57	+3.4
4,899,976	-		JDDGAC_25645	0.57	+2.5
4,900,016	+		JDDGAC_25645	0.59	+0.4
4,900,016	+		JDDGAC_25645	0.59	+1.9
4,900,016	+		JDDGAC_25645	0.59	+0.8
4,900,016	+		JDDGAC_25645	0.59	-0.7
4,900,016	+		JDDGAC_25645	0.59	+1.5
4,900,016	+		JDDGAC_25645	0.59	+3.6
4,900,017	-		JDDGAC_25645	0.59	+1.4
4,900,017	-		JDDGAC_25645	0.59	+2.5
4,900,017	-		JDDGAC_25645	0.59	+1.5
4,900,029	+		JDDGAC_25645	0.59	+0.1
4,900,116	+		JDDGAC_25645	0.63	-0.1
4,900,189	+		JDDGAC_25645	0.66	+3.0
4,900,195	+		JDDGAC_25645	0.66	+1.4
4,900,246	+		JDDGAC_25645	0.68	+1.4
4,900,247	-		JDDGAC_25645	0.68	+2.4
4,900,253	+		JDDGAC_25645	0.68	+2.3
4,900,343	+		JDDGAC_25645	0.72	+1.6
4,900,344	-		JDDGAC_25645	0.72	+0.8
4,900,351	+		JDDGAC_25645	0.72	-0.9
4,900,385	+		JDDGAC_25645	0.73	+2.1
4,900,385	+		JDDGAC_25645	0.73	+0.7
4,900,385	+		JDDGAC_25645	0.73	-0.0
4,900,386	-		JDDGAC_25645	0.73	+1.6
4,900,386	-		JDDGAC_25645	0.73	+0.9
4,900,386	-		JDDGAC_25645	0.73	+3.0
4,900,387	+		JDDGAC_25645	0.73	+2.5
4,900,387	+		JDDGAC_25645	0.73	+1.5
4,900,387	+		JDDGAC_25645	0.73	+0.8
4,900,387	+		JDDGAC_25645	0.73	+2.8
4,900,387	+		JDDGAC_25645	0.73	+2.3
4,900,388	-		JDDGAC_25645	0.74	+2.3
4,900,388	-		JDDGAC_25645	0.74	+2.2
4,900,388	-		JDDGAC_25645	0.74	+1.6
4,900,399	-		JDDGAC_25645	0.74	+1.5
4,900,579	+		JDDGAC_25645	0.81	+2.5
4,900,592	-		JDDGAC_25645	0.82	+2.0
4,900,673	+		JDDGAC_25645	0.85	+2.2
4,900,691	+		JDDGAC_25645	0.86	+0.2
4,900,692	-		JDDGAC_25645	0.86	+0.5
4,900,694	+		JDDGAC_25645	0.86	+0.7
4,900,694	+		JDDGAC_25645	0.86	+2.5
4,900,695	-		JDDGAC_25645	0.86	+3.2
4,900,695	-		JDDGAC_25645	0.86	+1.8
4,900,695	-		JDDGAC_25645	0.86	+1.7
4,900,695	-		JDDGAC_25645	0.86	+1.7
4,900,695	-		JDDGAC_25645	0.86	+1.0
4,900,726	-		JDDGAC_25645	0.87	+0.2
4,900,747	+		JDDGAC_25645	0.88	+0.7
4,900,770	+		JDDGAC_25645	0.89	+3.1
4,900,771	-		JDDGAC_25645	0.89	+2.2
4,900,771	-		JDDGAC_25645	0.89	+1.0
4,900,771	-		JDDGAC_25645	0.89	+1.0
4,900,774	+		JDDGAC_25645	0.89	+1.4
4,900,775	-		JDDGAC_25645	0.89	+2.8
4,900,793	+		JDDGAC_25645	0.90	+1.6
4,900,793	+		JDDGAC_25645	0.90	+1.2
4,900,794	-		JDDGAC_25645	0.90	+0.7
4,900,964	-				+0.7
4,900,971	-				+0.9
4,900,977	+				+2.9
4,901,041	+				+3.1
4,901,108	+				+0.5
4,901,109	-				+2.0
4,901,124	+				-0.3
4,901,213	+				+1.0
4,901,214	-				+1.6
4,901,296	+		JDDGAC_25650	0.14	+2.4
4,901,297	-		JDDGAC_25650	0.14	+1.9
4,901,297	-		JDDGAC_25650	0.14	+2.2
4,901,297	-		JDDGAC_25650	0.14	+2.3
4,901,543	+		JDDGAC_25650	0.27	+1.9
4,901,554	-		JDDGAC_25650	0.28	+1.2
4,901,556	+		JDDGAC_25650	0.28	+1.2
4,901,556	+		JDDGAC_25650	0.28	+2.5
4,901,687	+		JDDGAC_25650	0.35	+1.8
4,901,687	+		JDDGAC_25650	0.35	+1.3
4,901,688	-		JDDGAC_25650	0.35	+1.5
4,901,688	-		JDDGAC_25650	0.35	+0.4
4,901,722	-		JDDGAC_25650	0.37	+0.3
4,901,727	+		JDDGAC_25650	0.38	+2.5
4,901,785	+		JDDGAC_25650	0.41	+1.6
4,901,785	+		JDDGAC_25650	0.41	+1.3
4,901,806	+		JDDGAC_25650	0.42	+1.7
4,901,807	-		JDDGAC_25650	0.42	+1.3
4,901,807	-		JDDGAC_25650	0.42	+1.6
4,901,807	-		JDDGAC_25650	0.42	+1.4
4,901,835	+		JDDGAC_25650	0.44	+0.3
4,901,836	-		JDDGAC_25650	0.44	+2.3
4,901,880	+		JDDGAC_25650	0.46	-0.6
4,901,884	-		JDDGAC_25650	0.46	+1.4
4,902,045	+		JDDGAC_25650	0.55	+0.6
4,902,045	+		JDDGAC_25650	0.55	+1.9
4,902,046	-		JDDGAC_25650	0.55	+1.9