Strain Fitness in Escherichia coli ECRC98 around JDDGAC_21130

Experiment: Bas69

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas69
4,043,438	+				+1.4
4,043,439	-				+0.9
4,043,439	-				-1.2
4,043,439	-				+0.6
4,043,442	+				+0.6
4,043,443	-				-1.5
4,043,447	+				+0.5
4,043,448	-				-0.8
4,043,448	-				+1.0
4,043,478	+				+1.0
4,043,478	+				-1.1
4,043,482	+				+0.4
4,043,482	+				-0.3
4,043,482	+				+0.2
4,043,482	+				-0.4
4,043,483	-				-1.0
4,043,490	+				+1.4
4,043,491	-				-0.4
4,043,491	-				-0.1
4,043,516	-				-2.7
4,043,518	-				-2.0
4,043,518	-				+1.0
4,043,610	+	yhdN	JDDGAC_21125	0.34	-1.7
4,043,757	+	yhdN	JDDGAC_21125	0.74	-0.5
4,043,814	-	yhdN	JDDGAC_21125	0.90	-0.7
4,043,845	+				+0.0
4,043,849	+				-0.6
4,043,849	+				+0.1
4,043,850	-				-0.4
4,043,857	+				+0.2
4,043,858	-				+0.2
4,043,858	-				+0.8
4,043,858	-				+0.0
4,043,861	+				+0.8
4,043,861	+				-1.9
4,043,861	+				+1.0
4,043,861	+				+0.1
4,043,861	+				-2.0
4,043,861	+				+0.7
4,043,861	+				-1.0
4,043,861	+				-1.7
4,043,861	+				-0.1
4,043,862	-				+1.2
4,043,862	-				+0.2
4,043,862	-				-0.8
4,043,862	-				-1.2
4,043,862	-				+0.2
4,043,862	-				+0.2
4,043,862	-				+0.3
4,043,900	-				+1.0
4,043,922	+	zntR	JDDGAC_21130	0.14	+0.7
4,044,031	+	zntR	JDDGAC_21130	0.40	+0.7
4,044,032	-	zntR	JDDGAC_21130	0.40	+0.4
4,044,032	-	zntR	JDDGAC_21130	0.40	+0.8
4,044,092	+	zntR	JDDGAC_21130	0.54	+1.7
4,044,092	+	zntR	JDDGAC_21130	0.54	-0.5
4,044,168	-	zntR	JDDGAC_21130	0.72	+1.3
4,044,219	-	zntR	JDDGAC_21130	0.84	+3.3
4,044,308	-				+0.7
4,044,360	+				-0.3
4,044,360	+				+0.1
4,044,361	-				+3.3
4,044,374	+	arfA	JDDGAC_21135	0.14	+1.1
4,044,401	+	arfA	JDDGAC_21135	0.26	-1.2
4,044,401	+	arfA	JDDGAC_21135	0.26	-2.7
4,044,401	+	arfA	JDDGAC_21135	0.26	-0.5
4,044,401	+	arfA	JDDGAC_21135	0.26	-0.7
4,044,401	+	arfA	JDDGAC_21135	0.26	-1.0
4,044,402	-	arfA	JDDGAC_21135	0.27	+0.8
4,044,428	+	arfA	JDDGAC_21135	0.39	-0.1
4,044,515	+	arfA	JDDGAC_21135	0.79	+0.0
4,044,516	-	arfA	JDDGAC_21135	0.79	-0.1
4,044,516	-	arfA	JDDGAC_21135	0.79	+1.2
4,044,528	+	arfA	JDDGAC_21135	0.84	+0.6
4,044,560	-				-0.0
4,044,560	-				+0.7
4,044,606	+	mscL	JDDGAC_21140	0.12	-2.0
4,044,609	+	mscL	JDDGAC_21140	0.12	-1.6
4,044,620	+	mscL	JDDGAC_21140	0.15	+0.2
4,044,676	-	mscL	JDDGAC_21140	0.29	-0.3
4,044,680	+	mscL	JDDGAC_21140	0.30	-0.5
4,044,745	+	mscL	JDDGAC_21140	0.45	+2.0
4,044,806	+	mscL	JDDGAC_21140	0.60	+1.1
4,044,825	+	mscL	JDDGAC_21140	0.65	+0.9
4,044,826	-	mscL	JDDGAC_21140	0.65	+0.8
4,044,829	-	mscL	JDDGAC_21140	0.66	-0.5
4,044,959	+				+1.2
4,044,972	-				-2.2
4,044,981	-				+0.3
4,044,997	+				+0.4
4,044,997	+				-1.1
4,044,998	-				+0.9
4,045,013	+				+0.2
4,045,096	-				-0.5
4,045,100	-				-2.7