Strain Fitness in Escherichia coli ECRC98 around JDDGAC_10030

Experiment: Bas69

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas69
1,789,145	-	bioD	JDDGAC_10020	0.67	+0.2
1,789,191	+	bioD	JDDGAC_10020	0.74	-0.5
1,789,208	+	bioD	JDDGAC_10020	0.76	+0.1
1,789,215	+	bioD	JDDGAC_10020	0.77	+2.3
1,789,215	+	bioD	JDDGAC_10020	0.77	-0.5
1,789,216	-	bioD	JDDGAC_10020	0.78	+0.4
1,789,296	+	bioD	JDDGAC_10020	0.89	+2.0
1,789,296	+	bioD	JDDGAC_10020	0.89	+2.5
1,789,394	+				+0.6
1,789,394	+				+0.1
1,789,394	+				-2.2
1,789,466	-	bioC	JDDGAC_10025	0.14	+0.1
1,789,618	+	bioC	JDDGAC_10025	0.34	-2.4
1,789,630	-	bioC	JDDGAC_10025	0.36	-0.2
1,789,759	+	bioC	JDDGAC_10025	0.53	-0.7
1,789,906	+	bioC	JDDGAC_10025	0.72	-3.2
1,789,978	+	bioC	JDDGAC_10025	0.82	+0.8
1,789,978	+	bioC	JDDGAC_10025	0.82	-1.6
1,789,992	+	bioC	JDDGAC_10025	0.84	-2.5
1,789,992	+	bioC	JDDGAC_10025	0.84	-0.6
1,789,992	+	bioC	JDDGAC_10025	0.84	-0.8
1,790,057	+				+0.7
1,790,057	+				+0.0
1,790,057	+				+0.7
1,790,058	-				-0.8
1,790,100	+				-0.3
1,790,430	-	bioF	JDDGAC_10030	0.28	-0.1
1,790,467	-	bioF	JDDGAC_10030	0.32	+0.5
1,790,470	+	bioF	JDDGAC_10030	0.32	-0.1
1,790,497	-	bioF	JDDGAC_10030	0.34	-0.5
1,790,678	+	bioF	JDDGAC_10030	0.50	-0.5
1,790,864	-	bioF	JDDGAC_10030	0.66	-0.6
1,790,941	+	bioF	JDDGAC_10030	0.73	-0.4
1,790,942	-	bioF	JDDGAC_10030	0.73	+8.3
1,790,946	-	bioF	JDDGAC_10030	0.73	+1.5
1,791,010	+	bioF	JDDGAC_10030	0.79	+0.4
1,791,010	+	bioF	JDDGAC_10030	0.79	-0.4
1,791,108	-	bioF	JDDGAC_10030	0.87	-2.8
1,791,135	+	bioF	JDDGAC_10030	0.89	-1.4
1,791,256	+				+1.6
1,791,256	+				+1.2
1,791,273	-				-1.2
1,791,273	-				+0.2
1,791,273	-				+0.3
1,791,396	+	bioB	JDDGAC_10035	0.14	+0.6
1,791,522	-	bioB	JDDGAC_10035	0.26	+0.3
1,791,606	+	bioB	JDDGAC_10035	0.34	-0.1
1,791,607	-	bioB	JDDGAC_10035	0.34	+0.8
1,791,709	+	bioB	JDDGAC_10035	0.44	-1.7
1,791,709	+	bioB	JDDGAC_10035	0.44	+0.0
1,791,710	-	bioB	JDDGAC_10035	0.44	-0.8
1,791,710	-	bioB	JDDGAC_10035	0.44	+0.6
1,791,768	+	bioB	JDDGAC_10035	0.49	+0.4
1,791,786	-	bioB	JDDGAC_10035	0.51	+2.9
1,791,789	+	bioB	JDDGAC_10035	0.51	-0.5
1,791,790	-	bioB	JDDGAC_10035	0.52	-0.3
1,791,909	+	bioB	JDDGAC_10035	0.63	+0.3
1,791,909	+	bioB	JDDGAC_10035	0.63	+2.5
1,791,910	-	bioB	JDDGAC_10035	0.63	-0.5
1,791,960	-	bioB	JDDGAC_10035	0.68	+2.5
1,792,118	+	bioB	JDDGAC_10035	0.83	+0.1
1,792,250	-				-0.3