Strain Fitness in Escherichia coli ECRC98 around JDDGAC_07755

Experiment: Bas69

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntJDDGAC_07750 and JDDGAC_07755 overlap by 8 nucleotidesJDDGAC_07755 and JDDGAC_07760 are separated by 1 nucleotides JDDGAC_07750: JDDGAC_07750 - adenine/guanine phosphoribosyltransferase, at 1,343,019 to 1,344,161 _07750 JDDGAC_07755: JDDGAC_07755 - putative hydrolase (HAD superfamily), at 1,344,154 to 1,344,927 _07755 JDDGAC_07760: JDDGAC_07760 - Phosphoribosyl transferase (PRTase), at 1,344,929 to 1,346,008 _07760 Position (kb) 1344 1345Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1343.220 kb on + strand, within JDDGAC_07750at 1343.314 kb on + strand, within JDDGAC_07750at 1343.439 kb on + strand, within JDDGAC_07750at 1343.525 kb on + strand, within JDDGAC_07750at 1343.526 kb on - strand, within JDDGAC_07750at 1343.555 kb on + strand, within JDDGAC_07750at 1343.576 kb on + strand, within JDDGAC_07750at 1343.577 kb on - strand, within JDDGAC_07750at 1343.668 kb on + strand, within JDDGAC_07750at 1343.668 kb on + strand, within JDDGAC_07750at 1343.734 kb on + strand, within JDDGAC_07750at 1343.735 kb on - strand, within JDDGAC_07750at 1343.846 kb on + strand, within JDDGAC_07750at 1343.999 kb on + strand, within JDDGAC_07750at 1344.093 kb on - strandat 1344.110 kb on + strandat 1344.149 kb on + strandat 1344.150 kb on - strandat 1344.153 kb on + strandat 1344.153 kb on + strandat 1344.154 kb on - strandat 1344.471 kb on + strand, within JDDGAC_07755at 1344.601 kb on + strand, within JDDGAC_07755at 1344.601 kb on + strand, within JDDGAC_07755at 1344.695 kb on - strand, within JDDGAC_07755at 1344.712 kb on - strand, within JDDGAC_07755at 1344.715 kb on - strand, within JDDGAC_07755at 1345.210 kb on - strand, within JDDGAC_07760at 1345.296 kb on - strand, within JDDGAC_07760at 1345.296 kb on - strand, within JDDGAC_07760at 1345.402 kb on + strand, within JDDGAC_07760at 1345.792 kb on + strand, within JDDGAC_07760at 1345.813 kb on + strand, within JDDGAC_07760at 1345.851 kb on + strand, within JDDGAC_07760at 1345.852 kb on - strand, within JDDGAC_07760at 1345.852 kb on - strand, within JDDGAC_07760at 1345.852 kb on - strand, within JDDGAC_07760at 1345.852 kb on - strand, within JDDGAC_07760at 1345.872 kb on + strand, within JDDGAC_07760at 1345.872 kb on + strand, within JDDGAC_07760at 1345.872 kb on + strand, within JDDGAC_07760at 1345.885 kb on + strand, within JDDGAC_07760at 1345.885 kb on + strand, within JDDGAC_07760

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas69
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1,343,220 + JDDGAC_07750 0.18 -0.7
1,343,314 + JDDGAC_07750 0.26 +0.6
1,343,439 + JDDGAC_07750 0.37 -0.4
1,343,525 + JDDGAC_07750 0.44 +2.0
1,343,526 - JDDGAC_07750 0.44 +0.6
1,343,555 + JDDGAC_07750 0.47 -2.1
1,343,576 + JDDGAC_07750 0.49 -0.6
1,343,577 - JDDGAC_07750 0.49 -0.6
1,343,668 + JDDGAC_07750 0.57 +0.2
1,343,668 + JDDGAC_07750 0.57 +0.2
1,343,734 + JDDGAC_07750 0.63 -0.2
1,343,735 - JDDGAC_07750 0.63 -0.0
1,343,846 + JDDGAC_07750 0.72 -1.0
1,343,999 + JDDGAC_07750 0.86 -0.8
1,344,093 - -1.3
1,344,110 + -1.1
1,344,149 + -0.0
1,344,150 - +1.1
1,344,153 + +0.3
1,344,153 + +2.2
1,344,154 - +0.3
1,344,471 + JDDGAC_07755 0.41 -1.3
1,344,601 + JDDGAC_07755 0.58 -0.9
1,344,601 + JDDGAC_07755 0.58 -0.3
1,344,695 - JDDGAC_07755 0.70 +1.3
1,344,712 - JDDGAC_07755 0.72 -2.4
1,344,715 - JDDGAC_07755 0.72 -2.8
1,345,210 - JDDGAC_07760 0.26 -1.7
1,345,296 - JDDGAC_07760 0.34 -0.5
1,345,296 - JDDGAC_07760 0.34 +1.3
1,345,402 + JDDGAC_07760 0.44 +1.5
1,345,792 + JDDGAC_07760 0.80 -0.3
1,345,813 + JDDGAC_07760 0.82 +0.2
1,345,851 + JDDGAC_07760 0.85 +0.4
1,345,852 - JDDGAC_07760 0.85 -0.5
1,345,852 - JDDGAC_07760 0.85 -2.3
1,345,852 - JDDGAC_07760 0.85 -1.5
1,345,852 - JDDGAC_07760 0.85 -1.1
1,345,872 + JDDGAC_07760 0.87 +1.5
1,345,872 + JDDGAC_07760 0.87 +0.7
1,345,872 + JDDGAC_07760 0.87 -0.5
1,345,885 + JDDGAC_07760 0.89 -1.9
1,345,885 + JDDGAC_07760 0.89 +0.5

Or see this region's nucleotide sequence