Experiment: Bas69
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt JDDGAC_07750 and JDDGAC_07755 overlap by 8 nucleotides JDDGAC_07755 and JDDGAC_07760 are separated by 1 nucleotides
JDDGAC_07750: JDDGAC_07750 - adenine/guanine phosphoribosyltransferase, at 1,343,019 to 1,344,161
_07750
JDDGAC_07755: JDDGAC_07755 - putative hydrolase (HAD superfamily), at 1,344,154 to 1,344,927
_07755
JDDGAC_07760: JDDGAC_07760 - Phosphoribosyl transferase (PRTase), at 1,344,929 to 1,346,008
_07760
Position (kb)
1344
1345 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1343.220 kb on + strand, within JDDGAC_07750 at 1343.314 kb on + strand, within JDDGAC_07750 at 1343.439 kb on + strand, within JDDGAC_07750 at 1343.525 kb on + strand, within JDDGAC_07750 at 1343.526 kb on - strand, within JDDGAC_07750 at 1343.555 kb on + strand, within JDDGAC_07750 at 1343.576 kb on + strand, within JDDGAC_07750 at 1343.577 kb on - strand, within JDDGAC_07750 at 1343.668 kb on + strand, within JDDGAC_07750 at 1343.668 kb on + strand, within JDDGAC_07750 at 1343.734 kb on + strand, within JDDGAC_07750 at 1343.735 kb on - strand, within JDDGAC_07750 at 1343.846 kb on + strand, within JDDGAC_07750 at 1343.999 kb on + strand, within JDDGAC_07750 at 1344.093 kb on - strand at 1344.110 kb on + strand at 1344.149 kb on + strand at 1344.150 kb on - strand at 1344.153 kb on + strand at 1344.153 kb on + strand at 1344.154 kb on - strand at 1344.471 kb on + strand, within JDDGAC_07755 at 1344.601 kb on + strand, within JDDGAC_07755 at 1344.601 kb on + strand, within JDDGAC_07755 at 1344.695 kb on - strand, within JDDGAC_07755 at 1344.712 kb on - strand, within JDDGAC_07755 at 1344.715 kb on - strand, within JDDGAC_07755 at 1345.210 kb on - strand, within JDDGAC_07760 at 1345.296 kb on - strand, within JDDGAC_07760 at 1345.296 kb on - strand, within JDDGAC_07760 at 1345.402 kb on + strand, within JDDGAC_07760 at 1345.792 kb on + strand, within JDDGAC_07760 at 1345.813 kb on + strand, within JDDGAC_07760 at 1345.851 kb on + strand, within JDDGAC_07760 at 1345.852 kb on - strand, within JDDGAC_07760 at 1345.852 kb on - strand, within JDDGAC_07760 at 1345.852 kb on - strand, within JDDGAC_07760 at 1345.852 kb on - strand, within JDDGAC_07760 at 1345.872 kb on + strand, within JDDGAC_07760 at 1345.872 kb on + strand, within JDDGAC_07760 at 1345.872 kb on + strand, within JDDGAC_07760 at 1345.885 kb on + strand, within JDDGAC_07760 at 1345.885 kb on + strand, within JDDGAC_07760
Per-strain Table
Position Strand Gene LocusTag Fraction Bas69 remove 1,343,220 + JDDGAC_07750 0.18 -0.7 1,343,314 + JDDGAC_07750 0.26 +0.6 1,343,439 + JDDGAC_07750 0.37 -0.4 1,343,525 + JDDGAC_07750 0.44 +2.0 1,343,526 - JDDGAC_07750 0.44 +0.6 1,343,555 + JDDGAC_07750 0.47 -2.1 1,343,576 + JDDGAC_07750 0.49 -0.6 1,343,577 - JDDGAC_07750 0.49 -0.6 1,343,668 + JDDGAC_07750 0.57 +0.2 1,343,668 + JDDGAC_07750 0.57 +0.2 1,343,734 + JDDGAC_07750 0.63 -0.2 1,343,735 - JDDGAC_07750 0.63 -0.0 1,343,846 + JDDGAC_07750 0.72 -1.0 1,343,999 + JDDGAC_07750 0.86 -0.8 1,344,093 - -1.3 1,344,110 + -1.1 1,344,149 + -0.0 1,344,150 - +1.1 1,344,153 + +0.3 1,344,153 + +2.2 1,344,154 - +0.3 1,344,471 + JDDGAC_07755 0.41 -1.3 1,344,601 + JDDGAC_07755 0.58 -0.9 1,344,601 + JDDGAC_07755 0.58 -0.3 1,344,695 - JDDGAC_07755 0.70 +1.3 1,344,712 - JDDGAC_07755 0.72 -2.4 1,344,715 - JDDGAC_07755 0.72 -2.8 1,345,210 - JDDGAC_07760 0.26 -1.7 1,345,296 - JDDGAC_07760 0.34 -0.5 1,345,296 - JDDGAC_07760 0.34 +1.3 1,345,402 + JDDGAC_07760 0.44 +1.5 1,345,792 + JDDGAC_07760 0.80 -0.3 1,345,813 + JDDGAC_07760 0.82 +0.2 1,345,851 + JDDGAC_07760 0.85 +0.4 1,345,852 - JDDGAC_07760 0.85 -0.5 1,345,852 - JDDGAC_07760 0.85 -2.3 1,345,852 - JDDGAC_07760 0.85 -1.5 1,345,852 - JDDGAC_07760 0.85 -1.1 1,345,872 + JDDGAC_07760 0.87 +1.5 1,345,872 + JDDGAC_07760 0.87 +0.7 1,345,872 + JDDGAC_07760 0.87 -0.5 1,345,885 + JDDGAC_07760 0.89 -1.9 1,345,885 + JDDGAC_07760 0.89 +0.5
Or see this region's nucleotide sequence