Strain Fitness in Escherichia coli ECRC98 around JDDGAC_05070

Experiment: Bas69

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas69
889,528	+	rnb	JDDGAC_05065	0.64	+0.3
889,528	+	rnb	JDDGAC_05065	0.64	-0.1
889,722	+	rnb	JDDGAC_05065	0.74	+1.7
889,766	-	rnb	JDDGAC_05065	0.76	+1.2
890,055	+				+0.5
890,120	+				-0.9
890,454	-				-0.2
890,560	-				+0.2
890,586	+				+0.3
890,586	+				+0.3
890,587	-				+0.9
891,249	+	pdeR	JDDGAC_05070	0.40	-0.5
891,785	+	pdeR	JDDGAC_05070	0.67	-0.7
891,788	+	pdeR	JDDGAC_05070	0.67	+1.5
891,788	+	pdeR	JDDGAC_05070	0.67	+0.2
891,788	+	pdeR	JDDGAC_05070	0.67	-0.9
891,789	-	pdeR	JDDGAC_05070	0.67	+0.2
892,456	+				-1.2
892,456	+				-0.8
892,456	+				-1.2
892,461	-				+0.7
892,486	-				-1.1
892,487	+				+1.9
892,578	+				+2.5
892,698	+	yciZ	JDDGAC_05075	0.60	+0.3
892,836	-				+2.5
893,065	-	yciT	JDDGAC_05080	0.28	+0.5
893,067	-	yciT	JDDGAC_05080	0.28	+1.5
893,291	+	yciT	JDDGAC_05080	0.58	+0.8
893,291	+	yciT	JDDGAC_05080	0.58	-0.1
893,354	+	yciT	JDDGAC_05080	0.66	+2.5
893,354	+	yciT	JDDGAC_05080	0.66	+0.5