Strain Fitness in Escherichia coli ECRC98 around JDDGAC_04890

Experiment: Bas69

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas69
851,216	-	ycjT	JDDGAC_04885	0.56	-1.1
851,313	+	ycjT	JDDGAC_04885	0.60	+0.7
851,314	-	ycjT	JDDGAC_04885	0.60	+2.0
851,570	-	ycjT	JDDGAC_04885	0.71	+0.6
851,601	+	ycjT	JDDGAC_04885	0.73	+1.0
851,601	+	ycjT	JDDGAC_04885	0.73	-1.1
851,676	+	ycjT	JDDGAC_04885	0.76	+0.0
851,677	-	ycjT	JDDGAC_04885	0.76	-1.3
851,677	-	ycjT	JDDGAC_04885	0.76	-1.0
851,765	-	ycjT	JDDGAC_04885	0.80	+0.6
851,807	-	ycjT	JDDGAC_04885	0.82	+0.8
851,874	+	ycjT	JDDGAC_04885	0.85	-1.8
851,915	+	ycjT	JDDGAC_04885	0.87	+0.6
851,985	-	ycjT	JDDGAC_04885	0.90	-1.0
852,008	-				-0.1
852,072	+				+3.3
852,159	+				+0.8
852,160	-				-0.1
852,160	-				+2.6
852,160	-				-0.7
852,252	-				+0.4
852,254	-				-0.0
852,281	+				+0.9
852,334	-	ycjS	JDDGAC_04890	0.11	-1.1
852,424	-	ycjS	JDDGAC_04890	0.20	+1.0
852,424	-	ycjS	JDDGAC_04890	0.20	-1.8
852,579	-	ycjS	JDDGAC_04890	0.35	-1.2
852,683	+	ycjS	JDDGAC_04890	0.44	+1.6
852,684	-	ycjS	JDDGAC_04890	0.45	-0.2
852,684	-	ycjS	JDDGAC_04890	0.45	-0.2
852,702	+	ycjS	JDDGAC_04890	0.46	-0.5
852,703	-	ycjS	JDDGAC_04890	0.46	+0.6
852,754	-	ycjS	JDDGAC_04890	0.51	-1.3
852,754	-	ycjS	JDDGAC_04890	0.51	+0.7
852,809	+	ycjS	JDDGAC_04890	0.56	-0.4
852,810	-	ycjS	JDDGAC_04890	0.56	-0.5
853,187	+				-1.6
853,288	-				-1.0
853,353	-				-0.4
853,353	-				-0.6
853,370	+	ycjR	JDDGAC_04895	0.12	+1.2
853,371	-	ycjR	JDDGAC_04895	0.12	+1.2
853,452	+	ycjR	JDDGAC_04895	0.22	+0.0
853,782	+	ycjR	JDDGAC_04895	0.64	-0.4
853,843	-	ycjR	JDDGAC_04895	0.71	+0.1
854,135	-				-0.5
854,135	-				-1.2
854,247	-	ycjQ	JDDGAC_04900	0.15	-1.6