Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS18175

Experiment: R2A_PIPES with Nickel (II) chloride 848 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Nickel (II) chloride 848 uM
9,219	+		LRK53_RS18170	0.55	-1.4
9,220	-		LRK53_RS18170	0.55	-0.1
9,220	-		LRK53_RS18170	0.55	-3.7
9,292	-		LRK53_RS18170	0.60	-1.4
9,494	-		LRK53_RS18170	0.75	+0.1
9,494	-		LRK53_RS18170	0.75	-1.4
9,539	-		LRK53_RS18170	0.78	-1.9
9,621	+		LRK53_RS18170	0.84	-1.9
9,671	-		LRK53_RS18170	0.88	+0.9
9,833	+				-1.0
9,833	+				-0.3
9,833	+				-0.7
9,833	+				-1.6
9,833	+				+0.1
9,833	+				-0.3
9,833	+				+0.3
9,833	+				-2.1
9,833	+				-0.4
9,833	+				+0.2
9,833	+				-1.2
9,833	+				-2.8
9,833	+				-1.5
9,833	+				-0.1
9,833	+				-0.1
9,833	+				-1.0
9,834	-				-0.1
9,834	-				-0.3
9,834	-				-0.7
9,834	-				-0.5
9,834	-				-0.8
9,834	-				-0.7
9,834	-				-0.5
9,834	-				-2.5
9,834	-				-1.7
9,834	-				+0.7
9,834	-				+0.3
9,834	-				-2.5
9,834	-				-0.7
9,834	-				-0.8
9,834	-				-0.9
9,834	-				+0.9
9,834	-				-1.2
10,161	-				-1.5
10,449	+		LRK53_RS18175	0.17	-1.2
10,449	+		LRK53_RS18175	0.17	-0.9
10,449	+		LRK53_RS18175	0.17	+0.9
10,449	+		LRK53_RS18175	0.17	-1.1
10,449	+		LRK53_RS18175	0.17	-1.1
10,449	+		LRK53_RS18175	0.17	-1.7
10,449	+		LRK53_RS18175	0.17	-2.2
10,449	+		LRK53_RS18175	0.17	-3.0
10,449	+		LRK53_RS18175	0.17	-0.2
10,450	-		LRK53_RS18175	0.17	-0.1
10,450	-		LRK53_RS18175	0.17	-0.8
10,450	-		LRK53_RS18175	0.17	+0.3
10,450	-		LRK53_RS18175	0.17	-1.2
10,450	-		LRK53_RS18175	0.17	-1.1
10,450	-		LRK53_RS18175	0.17	-0.1
10,856	+		LRK53_RS18175	0.30	-1.1
10,857	-		LRK53_RS18175	0.30	+0.1
10,977	+		LRK53_RS18175	0.34	-0.5
10,978	-		LRK53_RS18175	0.34	+0.9
10,978	-		LRK53_RS18175	0.34	-3.3
11,271	+		LRK53_RS18175	0.43	-0.4
11,271	+		LRK53_RS18175	0.43	+0.6
11,271	+		LRK53_RS18175	0.43	+0.1
11,271	+		LRK53_RS18175	0.43	+0.9
11,271	+		LRK53_RS18175	0.43	-0.9
11,271	+		LRK53_RS18175	0.43	-1.9
11,271	+		LRK53_RS18175	0.43	-0.3
11,271	+		LRK53_RS18175	0.43	+1.9
11,272	-		LRK53_RS18175	0.43	+0.9
11,272	-		LRK53_RS18175	0.43	-2.7
11,272	-		LRK53_RS18175	0.43	-2.9
11,272	-		LRK53_RS18175	0.43	+0.9
11,272	-		LRK53_RS18175	0.43	+0.2
11,272	-		LRK53_RS18175	0.43	+0.3
11,475	+		LRK53_RS18175	0.49	-0.5
11,475	+		LRK53_RS18175	0.49	-1.8
11,475	+		LRK53_RS18175	0.49	-1.0
11,476	-		LRK53_RS18175	0.50	-1.9
11,476	-		LRK53_RS18175	0.50	-0.4
11,476	-		LRK53_RS18175	0.50	-0.7
11,476	-		LRK53_RS18175	0.50	-0.4
11,629	+		LRK53_RS18175	0.54	+0.9
11,629	+		LRK53_RS18175	0.54	-1.4
11,630	-		LRK53_RS18175	0.54	-1.7
11,630	-		LRK53_RS18175	0.54	-0.7
11,670	+		LRK53_RS18175	0.56	-0.5
11,670	+		LRK53_RS18175	0.56	+1.1
11,670	+		LRK53_RS18175	0.56	-1.1
11,671	-		LRK53_RS18175	0.56	-0.9
11,671	-		LRK53_RS18175	0.56	-0.7
11,707	+		LRK53_RS18175	0.57	-1.4
11,707	+		LRK53_RS18175	0.57	-1.9
11,708	-		LRK53_RS18175	0.57	+0.0
11,708	-		LRK53_RS18175	0.57	-0.2
11,708	-		LRK53_RS18175	0.57	-0.1
11,730	+		LRK53_RS18175	0.58	+1.3
11,778	+		LRK53_RS18175	0.59	-1.4
11,778	+		LRK53_RS18175	0.59	-0.8
11,871	+		LRK53_RS18175	0.62	-0.9
11,871	+		LRK53_RS18175	0.62	-1.4
11,871	+		LRK53_RS18175	0.62	-0.1
11,871	+		LRK53_RS18175	0.62	-0.4
11,871	+		LRK53_RS18175	0.62	-0.2
11,872	-		LRK53_RS18175	0.62	-0.1
11,872	-		LRK53_RS18175	0.62	-2.0
11,872	-		LRK53_RS18175	0.62	-1.3
11,872	-		LRK53_RS18175	0.62	+1.1
11,872	-		LRK53_RS18175	0.62	-0.7
11,988	+		LRK53_RS18175	0.66	-0.4
12,006	+		LRK53_RS18175	0.66	-1.1
12,007	-		LRK53_RS18175	0.66	+0.9
12,007	-		LRK53_RS18175	0.66	+1.3
12,007	-		LRK53_RS18175	0.66	-0.1
12,205	+		LRK53_RS18175	0.73	-1.1
12,205	+		LRK53_RS18175	0.73	-1.7
12,205	+		LRK53_RS18175	0.73	-0.4
12,231	+		LRK53_RS18175	0.74	-1.2
12,231	+		LRK53_RS18175	0.74	-0.0
12,231	+		LRK53_RS18175	0.74	-1.5
12,231	+		LRK53_RS18175	0.74	-0.7
12,231	+		LRK53_RS18175	0.74	-0.5
12,232	-		LRK53_RS18175	0.74	-0.1
12,232	-		LRK53_RS18175	0.74	-1.2
12,232	-		LRK53_RS18175	0.74	-1.9
12,232	-		LRK53_RS18175	0.74	-1.3
12,232	-		LRK53_RS18175	0.74	-3.5
12,298	-		LRK53_RS18175	0.76	-0.1
12,430	-		LRK53_RS18175	0.80	-1.1
12,462	+		LRK53_RS18175	0.81	-1.4
12,462	+		LRK53_RS18175	0.81	-0.1
12,462	+		LRK53_RS18175	0.81	-1.7
12,463	-		LRK53_RS18175	0.81	-0.9
12,463	-		LRK53_RS18175	0.81	+0.4
12,463	-		LRK53_RS18175	0.81	-1.7
12,463	-		LRK53_RS18175	0.81	-1.5
12,489	+		LRK53_RS18175	0.82	+0.7
12,489	+		LRK53_RS18175	0.82	-2.3
12,543	+		LRK53_RS18175	0.83	-0.1
12,543	+		LRK53_RS18175	0.83	-0.7
12,543	+		LRK53_RS18175	0.83	-0.4
12,543	+		LRK53_RS18175	0.83	-1.1
12,543	+		LRK53_RS18175	0.83	-0.7
12,544	-		LRK53_RS18175	0.84	-1.2
12,544	-		LRK53_RS18175	0.84	+0.7
12,873	+				+0.3
12,873	+				-0.1
12,873	+				-1.2
12,873	+				-0.7
12,873	+				+0.9
12,873	+				-1.5
12,873	+				-0.1
12,873	+				-1.9
12,873	+				-0.4
12,873	+				-0.8
12,873	+				-0.7
12,873	+				+0.7
12,873	+				-0.8
12,874	-				-1.9
12,874	-				-2.1
12,874	-				+0.3
12,874	-				-1.8
12,874	-				-0.7
12,874	-				-2.4
12,874	-				-1.9
12,874	-				+0.9
12,874	-				-0.6
12,874	-				+0.3
12,874	-				-1.0
12,874	-				-1.2
13,180	+				-1.1
13,180	+				+0.3
13,180	+				-2.9
13,180	+				-0.2
13,180	+				-0.2
13,180	+				-0.7
13,180	+				-0.1
13,180	+				-0.9
13,180	+				-1.0
13,181	-				-1.4
13,181	-				-0.8
13,181	-				-0.4
13,181	-				+0.1
13,181	-				+1.3
13,181	-				-1.6
13,181	-				-0.3
13,219	+				-0.1
13,220	-				-1.9
13,220	-				-0.3
13,220	-				-1.7
13,262	+				+0.9
13,262	+				-0.3
13,263	-				-1.1
13,263	-				-1.1
13,263	-				-1.2
13,263	-				+0.2
13,263	-				-2.2
13,263	-				-1.2
13,277	-				-0.9
13,386	+				-0.1
13,386	+				-1.2
13,386	+				-0.7
13,387	-				-0.8
13,387	-				-0.2
13,387	-				-2.4
13,387	-				+0.9
13,410	+				-1.3
13,449	+				-1.9
13,449	+				-1.7
13,449	+				+0.1
13,449	+				-0.1
13,449	+				-1.7
13,449	+				-1.8
13,450	-				-1.4
13,450	-				-2.1
13,450	-				-2.9
13,450	-				-0.1
13,450	-				-1.5
13,468	-		LRK53_RS18180	0.10	-0.1
13,516	+		LRK53_RS18180	0.15	-1.7
13,516	+		LRK53_RS18180	0.15	+0.2
13,517	-		LRK53_RS18180	0.15	+0.9
13,578	+		LRK53_RS18180	0.20	-0.8
13,578	+		LRK53_RS18180	0.20	-1.1
13,579	-		LRK53_RS18180	0.20	-1.5
13,579	-		LRK53_RS18180	0.20	-1.1
13,926	+		LRK53_RS18180	0.51	-0.9
13,927	-		LRK53_RS18180	0.51	+0.3
13,927	-		LRK53_RS18180	0.51	+0.9
13,927	-		LRK53_RS18180	0.51	-0.1
14,033	-		LRK53_RS18180	0.61	-0.2
14,049	+		LRK53_RS18180	0.62	-0.5
14,049	+		LRK53_RS18180	0.62	-0.5
14,050	-		LRK53_RS18180	0.62	-1.7
14,050	-		LRK53_RS18180	0.62	-1.3