Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16850

Experiment: R2A_PIPES with Nickel (II) chloride 848 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Nickel (II) chloride 848 uM
3,703,064	+		LRK53_RS16840	0.51	-1.3
3,703,064	+		LRK53_RS16840	0.51	-0.5
3,703,064	+		LRK53_RS16840	0.51	-1.2
3,703,064	+		LRK53_RS16840	0.51	-1.8
3,703,064	+		LRK53_RS16840	0.51	-1.0
3,703,064	+		LRK53_RS16840	0.51	-0.7
3,703,064	+		LRK53_RS16840	0.51	-1.2
3,703,064	+		LRK53_RS16840	0.51	-1.8
3,703,064	+		LRK53_RS16840	0.51	-0.9
3,703,065	-		LRK53_RS16840	0.51	+0.1
3,703,065	-		LRK53_RS16840	0.51	-0.9
3,703,065	-		LRK53_RS16840	0.51	+0.1
3,703,065	-		LRK53_RS16840	0.51	-1.9
3,703,065	-		LRK53_RS16840	0.51	-0.9
3,703,065	-		LRK53_RS16840	0.51	-1.3
3,703,065	-		LRK53_RS16840	0.51	-0.3
3,703,065	-		LRK53_RS16840	0.51	+1.1
3,703,065	-		LRK53_RS16840	0.51	-1.8
3,703,065	-		LRK53_RS16840	0.51	-0.5
3,703,065	-		LRK53_RS16840	0.51	+0.6
3,703,065	-		LRK53_RS16840	0.51	-1.4
3,703,065	-		LRK53_RS16840	0.51	-0.7
3,703,065	-		LRK53_RS16840	0.51	-3.0
3,703,065	-		LRK53_RS16840	0.51	-1.3
3,703,065	-		LRK53_RS16840	0.51	-0.8
3,703,065	-		LRK53_RS16840	0.51	-1.3
3,703,065	-		LRK53_RS16840	0.51	+1.1
3,703,065	-		LRK53_RS16840	0.51	-1.4
3,703,065	-		LRK53_RS16840	0.51	+0.4
3,703,065	-		LRK53_RS16840	0.51	-0.9
3,703,163	+		LRK53_RS16840	0.58	-0.9
3,703,163	+		LRK53_RS16840	0.58	-1.6
3,703,163	+		LRK53_RS16840	0.58	-1.3
3,703,163	+		LRK53_RS16840	0.58	-1.7
3,703,163	+		LRK53_RS16840	0.58	+2.1
3,703,163	+		LRK53_RS16840	0.58	-1.1
3,703,163	+		LRK53_RS16840	0.58	-0.5
3,703,163	+		LRK53_RS16840	0.58	+0.1
3,703,163	+		LRK53_RS16840	0.58	-1.7
3,703,163	+		LRK53_RS16840	0.58	-0.1
3,703,164	-		LRK53_RS16840	0.58	-2.5
3,703,164	-		LRK53_RS16840	0.58	-1.0
3,703,164	-		LRK53_RS16840	0.58	-2.4
3,703,164	-		LRK53_RS16840	0.58	-1.5
3,703,164	-		LRK53_RS16840	0.58	-1.1
3,703,164	-		LRK53_RS16840	0.58	-0.5
3,703,164	-		LRK53_RS16840	0.58	+0.3
3,703,164	-		LRK53_RS16840	0.58	-1.7
3,703,259	+		LRK53_RS16840	0.66	+0.1
3,703,259	+		LRK53_RS16840	0.66	-0.5
3,703,260	-		LRK53_RS16840	0.66	-2.5
3,703,260	-		LRK53_RS16840	0.66	-0.3
3,703,260	-		LRK53_RS16840	0.66	-1.7
3,703,478	+		LRK53_RS16840	0.82	-0.9
3,703,478	+		LRK53_RS16840	0.82	-1.0
3,703,478	+		LRK53_RS16840	0.82	-1.1
3,703,478	+		LRK53_RS16840	0.82	-1.4
3,703,479	-		LRK53_RS16840	0.82	-0.9
3,703,479	-		LRK53_RS16840	0.82	-1.3
3,703,479	-		LRK53_RS16840	0.82	-1.9
3,703,538	+		LRK53_RS16840	0.87	+0.1
3,703,538	+		LRK53_RS16840	0.87	-3.1
3,703,538	+		LRK53_RS16840	0.87	+1.1
3,703,538	+		LRK53_RS16840	0.87	-1.9
3,703,538	+		LRK53_RS16840	0.87	-0.5
3,703,538	+		LRK53_RS16840	0.87	-0.9
3,703,538	+		LRK53_RS16840	0.87	+1.1
3,703,538	+		LRK53_RS16840	0.87	-1.5
3,703,539	-		LRK53_RS16840	0.87	+0.1
3,703,539	-		LRK53_RS16840	0.87	+0.1
3,703,539	-		LRK53_RS16840	0.87	-0.9
3,703,539	-		LRK53_RS16840	0.87	-0.4
3,703,539	-		LRK53_RS16840	0.87	+0.3
3,703,539	-		LRK53_RS16840	0.87	-0.5
3,703,539	-		LRK53_RS16840	0.87	-0.5
3,703,539	-		LRK53_RS16840	0.87	-0.5
3,703,539	-		LRK53_RS16840	0.87	-0.5
3,703,539	-		LRK53_RS16840	0.87	-1.2
3,703,539	-		LRK53_RS16840	0.87	-1.3
3,703,539	-		LRK53_RS16840	0.87	-0.7
3,703,625	+				-0.2
3,703,625	+				-2.0
3,703,625	+				+0.1
3,703,625	+				+0.1
3,703,625	+				+1.6
3,703,625	+				-0.7
3,703,625	+				-0.5
3,703,626	-				-1.4
3,703,626	-				-1.1
3,703,626	-				+0.1
3,703,744	-				-1.8
3,703,762	-				-0.4
3,703,780	+				-0.9
3,703,780	+				-0.3
3,703,780	+				+0.2
3,703,780	+				-1.7
3,703,780	+				-0.9
3,703,780	+				-0.5
3,703,780	+				-0.3
3,703,780	+				-0.9
3,703,780	+				+0.6
3,703,780	+				-0.9
3,703,780	+				-1.4
3,703,780	+				-0.1
3,703,780	+				+1.1
3,703,781	-				-1.5
3,703,781	-				-0.4
3,703,781	-				-2.4
3,703,781	-				+1.1
3,703,781	-				+0.1
3,703,781	-				-1.1
3,703,781	-				+0.1
3,703,781	-				-0.5
3,703,781	-				-1.6
3,703,781	-				-1.1
3,703,781	-				-0.5
3,703,781	-				-1.6
3,703,781	-				-1.6
3,703,795	+				+0.1
3,703,795	+				+1.1
3,703,795	+				+1.8
3,703,795	+				-0.4
3,703,795	+				+1.8
3,703,795	+				-1.7
3,703,795	+				+0.4
3,703,795	+				+1.8
3,703,795	+				+2.0
3,703,796	-				+1.1
3,703,796	-				-1.3
3,703,796	-				-0.5
3,703,796	-				-0.1
3,703,796	-				+0.1
3,703,826	+				+1.1
3,703,826	+				+0.1
3,703,826	+				-0.9
3,703,827	-				-0.5
3,703,827	-				-0.8
3,703,827	-				-0.5
3,703,827	-				-1.7
3,703,827	-				+0.1
3,704,120	+				-1.5
3,704,120	+				-2.6
3,704,120	+				+0.5
3,704,120	+				+1.1
3,704,121	-				-1.6
3,704,121	-				-0.3
3,704,121	-				+0.1
3,704,121	-				-0.9
3,704,121	-				+0.1
3,704,121	-				-0.9
3,704,186	+				-0.7
3,704,186	+				-0.2
3,704,187	-				-0.2
3,704,187	-				+1.1
3,704,187	-				-1.0
3,704,187	-				-2.6
3,704,315	+		LRK53_RS16850	0.16	-2.2
3,704,315	+		LRK53_RS16850	0.16	-0.3
3,704,315	+		LRK53_RS16850	0.16	-2.5
3,704,315	+		LRK53_RS16850	0.16	-2.1
3,704,315	+		LRK53_RS16850	0.16	-1.7
3,704,315	+		LRK53_RS16850	0.16	-1.0
3,704,316	-		LRK53_RS16850	0.16	+0.1
3,704,316	-		LRK53_RS16850	0.16	-1.3
3,704,316	-		LRK53_RS16850	0.16	+0.8
3,704,318	+		LRK53_RS16850	0.17	-1.5
3,704,318	+		LRK53_RS16850	0.17	-1.3
3,704,318	+		LRK53_RS16850	0.17	-1.9
3,704,318	+		LRK53_RS16850	0.17	-0.9
3,704,319	-		LRK53_RS16850	0.17	-0.3
3,704,319	-		LRK53_RS16850	0.17	+0.1
3,704,319	-		LRK53_RS16850	0.17	+0.1
3,704,319	-		LRK53_RS16850	0.17	+0.1
3,704,319	-		LRK53_RS16850	0.17	-1.3
3,704,328	-		LRK53_RS16850	0.17	-0.5
3,704,328	-		LRK53_RS16850	0.17	-0.9
3,704,328	-		LRK53_RS16850	0.17	-1.5
3,704,328	-		LRK53_RS16850	0.17	+1.5
3,704,328	-		LRK53_RS16850	0.17	+0.5
3,704,684	+		LRK53_RS16850	0.40	-0.7
3,704,684	+		LRK53_RS16850	0.40	-1.3
3,704,684	+		LRK53_RS16850	0.40	-1.6
3,704,685	-		LRK53_RS16850	0.40	+0.5
3,704,685	-		LRK53_RS16850	0.40	-1.3
3,704,685	-		LRK53_RS16850	0.40	-0.5
3,704,896	+		LRK53_RS16850	0.53	-0.5
3,705,041	+		LRK53_RS16850	0.63	+0.1
3,705,041	+		LRK53_RS16850	0.63	-1.7
3,705,041	+		LRK53_RS16850	0.63	-1.5
3,705,041	+		LRK53_RS16850	0.63	-1.3
3,705,041	+		LRK53_RS16850	0.63	-0.6
3,705,042	-		LRK53_RS16850	0.63	+0.1
3,705,146	+		LRK53_RS16850	0.69	-0.9
3,705,146	+		LRK53_RS16850	0.69	+0.5
3,705,146	+		LRK53_RS16850	0.69	-0.9
3,705,146	+		LRK53_RS16850	0.69	+0.1
3,705,146	+		LRK53_RS16850	0.69	-0.5
3,705,146	+		LRK53_RS16850	0.69	-0.7
3,705,146	+		LRK53_RS16850	0.69	-0.5
3,705,146	+		LRK53_RS16850	0.69	-0.5
3,705,146	+		LRK53_RS16850	0.69	-1.5
3,705,147	-		LRK53_RS16850	0.69	+1.1
3,705,147	-		LRK53_RS16850	0.69	-1.9
3,705,147	-		LRK53_RS16850	0.69	-0.7
3,705,147	-		LRK53_RS16850	0.69	-1.5
3,705,147	-		LRK53_RS16850	0.69	-2.1
3,705,147	-		LRK53_RS16850	0.69	+0.5
3,705,147	-		LRK53_RS16850	0.69	-0.5
3,705,147	-		LRK53_RS16850	0.69	+0.6
3,705,147	-		LRK53_RS16850	0.69	+1.1
3,705,147	-		LRK53_RS16850	0.69	-0.9
3,705,263	+		LRK53_RS16850	0.77	-1.8
3,705,263	+		LRK53_RS16850	0.77	+0.5
3,705,263	+		LRK53_RS16850	0.77	+1.1
3,705,264	-		LRK53_RS16850	0.77	-0.5
3,705,264	-		LRK53_RS16850	0.77	+0.1
3,705,302	-		LRK53_RS16850	0.79	-0.5
3,705,302	-		LRK53_RS16850	0.79	-2.4
3,705,332	+		LRK53_RS16850	0.81	-1.9
3,705,333	-		LRK53_RS16850	0.81	+1.1
3,705,333	-		LRK53_RS16850	0.81	-0.5
3,705,333	-		LRK53_RS16850	0.81	-1.4
3,705,333	-		LRK53_RS16850	0.81	-0.3
3,705,333	-		LRK53_RS16850	0.81	+1.1
3,705,435	+		LRK53_RS16850	0.88	-0.9
3,705,435	+		LRK53_RS16850	0.88	-0.9
3,705,435	+		LRK53_RS16850	0.88	-0.9
3,705,435	+		LRK53_RS16850	0.88	-1.2
3,705,435	+		LRK53_RS16850	0.88	-0.9
3,705,436	-		LRK53_RS16850	0.88	+0.1
3,705,436	-		LRK53_RS16850	0.88	+0.1
3,705,512	+				+0.7
3,705,512	+				-0.5
3,705,513	-				-1.3
3,705,513	-				-0.9
3,705,648	+				-2.4
3,705,648	+				-1.3
3,705,649	-				-1.9
3,705,897	+		LRK53_RS16855	0.23	-1.1
3,705,897	+		LRK53_RS16855	0.23	-0.0
3,705,897	+		LRK53_RS16855	0.23	-0.6
3,705,897	+		LRK53_RS16855	0.23	+2.1
3,705,897	+		LRK53_RS16855	0.23	-1.2
3,705,897	+		LRK53_RS16855	0.23	-0.3
3,705,897	+		LRK53_RS16855	0.23	-0.5
3,705,897	+		LRK53_RS16855	0.23	-0.5
3,705,897	+		LRK53_RS16855	0.23	-1.4
3,705,897	+		LRK53_RS16855	0.23	-1.5
3,705,897	+		LRK53_RS16855	0.23	-1.7
3,705,897	+		LRK53_RS16855	0.23	+0.1
3,705,897	+		LRK53_RS16855	0.23	-0.5
3,705,897	+		LRK53_RS16855	0.23	-1.7
3,705,897	+		LRK53_RS16855	0.23	-0.9
3,705,897	+		LRK53_RS16855	0.23	-1.1
3,705,897	+		LRK53_RS16855	0.23	+1.1
3,705,897	+		LRK53_RS16855	0.23	-1.3
3,705,897	+		LRK53_RS16855	0.23	+1.1
3,705,897	+		LRK53_RS16855	0.23	-2.5
3,705,898	-		LRK53_RS16855	0.23	+0.1
3,705,898	-		LRK53_RS16855	0.23	-0.5
3,705,898	-		LRK53_RS16855	0.23	-0.8
3,705,898	-		LRK53_RS16855	0.23	+0.1
3,705,898	-		LRK53_RS16855	0.23	-0.5
3,705,898	-		LRK53_RS16855	0.23	-0.9
3,705,898	-		LRK53_RS16855	0.23	+1.1
3,705,898	-		LRK53_RS16855	0.23	-0.3
3,705,898	-		LRK53_RS16855	0.23	+0.5
3,705,898	-		LRK53_RS16855	0.23	-0.3
3,705,898	-		LRK53_RS16855	0.23	+0.1
3,705,898	-		LRK53_RS16855	0.23	-0.3
3,705,898	-		LRK53_RS16855	0.23	-0.9
3,705,898	-		LRK53_RS16855	0.23	+1.1
3,705,898	-		LRK53_RS16855	0.23	-1.3
3,705,898	-		LRK53_RS16855	0.23	-0.7
3,705,898	-		LRK53_RS16855	0.23	+0.1
3,705,898	-		LRK53_RS16855	0.23	-0.9
3,705,898	-		LRK53_RS16855	0.23	-1.5
3,705,898	-		LRK53_RS16855	0.23	-0.5
3,705,898	-		LRK53_RS16855	0.23	+0.5
3,705,898	-		LRK53_RS16855	0.23	-0.5
3,705,898	-		LRK53_RS16855	0.23	-0.5
3,706,281	+		LRK53_RS16855	0.57	+0.1
3,706,281	+		LRK53_RS16855	0.57	-0.7
3,706,281	+		LRK53_RS16855	0.57	-1.4
3,706,281	+		LRK53_RS16855	0.57	-1.2
3,706,281	+		LRK53_RS16855	0.57	+0.1
3,706,281	+		LRK53_RS16855	0.57	-0.3
3,706,281	+		LRK53_RS16855	0.57	-0.5
3,706,281	+		LRK53_RS16855	0.57	+0.5
3,706,281	+		LRK53_RS16855	0.57	-0.1
3,706,282	-		LRK53_RS16855	0.57	+1.1
3,706,282	-		LRK53_RS16855	0.57	-0.2
3,706,282	-		LRK53_RS16855	0.57	+1.1
3,706,282	-		LRK53_RS16855	0.57	+0.1
3,706,282	-		LRK53_RS16855	0.57	-2.1
3,706,410	+		LRK53_RS16855	0.68	+0.1
3,706,410	+		LRK53_RS16855	0.68	+1.1
3,706,410	+		LRK53_RS16855	0.68	-0.7
3,706,410	+		LRK53_RS16855	0.68	+0.2
3,706,410	+		LRK53_RS16855	0.68	-1.1
3,706,410	+		LRK53_RS16855	0.68	+0.1
3,706,411	-		LRK53_RS16855	0.68	+0.1
3,706,411	-		LRK53_RS16855	0.68	-0.9
3,706,411	-		LRK53_RS16855	0.68	+1.1
3,706,411	-		LRK53_RS16855	0.68	-0.9
3,706,411	-		LRK53_RS16855	0.68	-0.5