Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13245

Experiment: R2A_PIPES with Nickel (II) chloride 848 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Nickel (II) chloride 848 uM
2,918,171	+		LRK53_RS13240	0.54	-0.5
2,918,171	+		LRK53_RS13240	0.54	-0.7
2,918,171	+		LRK53_RS13240	0.54	-0.9
2,918,171	+		LRK53_RS13240	0.54	-2.2
2,918,171	+		LRK53_RS13240	0.54	+2.5
2,918,171	+		LRK53_RS13240	0.54	-0.7
2,918,171	+		LRK53_RS13240	0.54	-1.2
2,918,172	-		LRK53_RS13240	0.54	+0.2
2,918,172	-		LRK53_RS13240	0.54	+0.3
2,918,172	-		LRK53_RS13240	0.54	-0.1
2,918,172	-		LRK53_RS13240	0.54	-0.1
2,918,172	-		LRK53_RS13240	0.54	+0.9
2,918,172	-		LRK53_RS13240	0.54	-2.2
2,918,172	-		LRK53_RS13240	0.54	-1.4
2,918,172	-		LRK53_RS13240	0.54	+0.9
2,918,288	+		LRK53_RS13240	0.62	-1.7
2,918,289	-		LRK53_RS13240	0.62	+1.9
2,918,289	-		LRK53_RS13240	0.62	+0.9
2,918,289	-		LRK53_RS13240	0.62	-1.4
2,918,289	-		LRK53_RS13240	0.62	-0.7
2,918,586	-		LRK53_RS13240	0.84	-0.1
2,918,586	-		LRK53_RS13240	0.84	-1.1
2,918,586	-		LRK53_RS13240	0.84	-1.1
2,918,593	+		LRK53_RS13240	0.85	-1.2
2,918,593	+		LRK53_RS13240	0.85	-1.8
2,918,593	+		LRK53_RS13240	0.85	-1.1
2,918,594	-		LRK53_RS13240	0.85	+0.9
2,918,657	+		LRK53_RS13240	0.89	-1.1
2,918,657	+		LRK53_RS13240	0.89	-1.2
2,918,657	+		LRK53_RS13240	0.89	-0.4
2,918,657	+		LRK53_RS13240	0.89	+0.9
2,918,657	+		LRK53_RS13240	0.89	+0.9
2,918,658	-		LRK53_RS13240	0.89	-1.2
2,918,740	+				+1.9
2,918,740	+				-1.3
2,918,740	+				-1.8
2,918,741	-				-0.9
2,918,741	-				-1.6
2,918,854	+				-0.3
2,918,854	+				-1.9
2,918,854	+				-0.5
2,918,854	+				-1.1
2,918,854	+				-1.1
2,918,854	+				-2.2
2,918,855	-				-1.1
2,918,855	-				-0.4
2,918,855	-				+0.9
2,918,855	-				-0.7
2,918,855	-				-1.7
2,918,855	-				-1.1
2,918,856	+				-1.9
2,918,856	+				-1.5
2,918,856	+				-1.1
2,918,856	+				-1.2
2,918,856	+				+0.9
2,918,856	+				-1.4
2,918,856	+				-1.8
2,918,856	+				-0.7
2,918,856	+				-0.7
2,918,856	+				-0.8
2,918,856	+				+0.9
2,918,856	+				-0.5
2,918,856	+				-0.1
2,918,856	+				+0.9
2,918,856	+				-0.1
2,918,856	+				-0.5
2,918,856	+				-2.0
2,918,856	+				+0.2
2,918,856	+				-0.7
2,918,857	-				-0.5
2,918,857	-				-0.1
2,918,857	-				-0.9
2,918,857	-				-2.1
2,918,857	-				-0.1
2,918,857	-				-1.8
2,918,857	-				-0.1
2,918,857	-				-0.7
2,918,857	-				-1.4
2,918,857	-				+0.9
2,918,857	-				+1.9
2,918,857	-				-0.5
2,918,885	+				-0.7
2,918,885	+				-0.4
2,918,886	-				-0.9
2,918,886	-				+2.5
2,918,886	-				-0.1
2,918,939	+				-2.5
2,918,939	+				-1.9
2,918,939	+				+0.9
2,918,940	-				+0.3
2,918,940	-				-1.4
2,918,940	-				-0.7
2,918,940	-				-0.7
2,918,940	-				-1.3
2,918,940	-				-2.3
2,918,940	-				+0.9
2,918,940	-				+1.9
2,919,123	+		LRK53_RS13245	0.18	-0.1
2,919,123	+		LRK53_RS13245	0.18	-0.5
2,919,123	+		LRK53_RS13245	0.18	-0.6
2,919,123	+		LRK53_RS13245	0.18	-1.4
2,919,123	+		LRK53_RS13245	0.18	-0.1
2,919,123	+		LRK53_RS13245	0.18	-0.9
2,919,123	+		LRK53_RS13245	0.18	-1.7
2,919,123	+		LRK53_RS13245	0.18	+0.9
2,919,124	-		LRK53_RS13245	0.18	-1.7
2,919,124	-		LRK53_RS13245	0.18	-0.7
2,919,127	-		LRK53_RS13245	0.19	-1.3
2,919,127	-		LRK53_RS13245	0.19	-1.7
2,919,127	-		LRK53_RS13245	0.19	-0.7
2,919,135	+		LRK53_RS13245	0.20	-0.7
2,919,135	+		LRK53_RS13245	0.20	-1.0
2,919,135	+		LRK53_RS13245	0.20	-1.4
2,919,136	-		LRK53_RS13245	0.20	-0.7
2,919,136	-		LRK53_RS13245	0.20	-1.1
2,919,136	-		LRK53_RS13245	0.20	-3.2
2,919,136	-		LRK53_RS13245	0.20	-0.4
2,919,136	-		LRK53_RS13245	0.20	-0.4
2,919,136	-		LRK53_RS13245	0.20	+0.9
2,919,136	-		LRK53_RS13245	0.20	-1.4
2,919,159	+		LRK53_RS13245	0.23	-0.9
2,919,160	-		LRK53_RS13245	0.23	+0.2
2,919,225	+		LRK53_RS13245	0.31	+0.1
2,919,225	+		LRK53_RS13245	0.31	-1.4
2,919,226	-		LRK53_RS13245	0.31	-2.0
2,919,462	+		LRK53_RS13245	0.59	-0.1
2,919,462	+		LRK53_RS13245	0.59	-0.1
2,919,463	-		LRK53_RS13245	0.60	-2.0
2,919,463	-		LRK53_RS13245	0.60	-1.3
2,919,463	-		LRK53_RS13245	0.60	-0.7
2,919,463	-		LRK53_RS13245	0.60	-3.0
2,919,463	-		LRK53_RS13245	0.60	-1.1
2,919,464	-		LRK53_RS13245	0.60	-1.7
2,919,665	+		LRK53_RS13245	0.84	+0.6
2,919,665	+		LRK53_RS13245	0.84	+0.9
2,919,665	+		LRK53_RS13245	0.84	-1.4
2,919,666	-		LRK53_RS13245	0.84	-0.3
2,919,672	+		LRK53_RS13245	0.85	-0.8
2,919,672	+		LRK53_RS13245	0.85	-1.1
2,919,673	-		LRK53_RS13245	0.85	-0.7
2,919,673	-		LRK53_RS13245	0.85	-0.1
2,919,673	-		LRK53_RS13245	0.85	-0.6
2,919,673	-		LRK53_RS13245	0.85	-0.1
2,919,878	+				-0.1
2,919,879	-				+0.9
2,920,056	+				-0.7
2,920,056	+				+0.3
2,920,056	+				-1.6
2,920,056	+				-1.4
2,920,056	+				-0.1
2,920,056	+				-1.4
2,920,057	-				-0.4
2,920,057	-				-1.1
2,920,057	-				-1.7
2,920,057	-				-1.4
2,920,057	-				-0.7
2,920,057	-				+0.3
2,920,057	-				-0.9
2,920,062	+				-1.0
2,920,062	+				+0.6
2,920,063	-				-1.1
2,920,063	-				+0.0
2,920,063	-				-0.1
2,920,126	+		LRK53_RS13250	0.12	-1.4
2,920,126	+		LRK53_RS13250	0.12	-0.2
2,920,126	+		LRK53_RS13250	0.12	-0.7
2,920,126	+		LRK53_RS13250	0.12	-1.1
2,920,127	-		LRK53_RS13250	0.12	-0.1
2,920,127	-		LRK53_RS13250	0.12	-0.7
2,920,127	-		LRK53_RS13250	0.12	-0.1
2,920,129	+		LRK53_RS13250	0.12	-0.1
2,920,129	+		LRK53_RS13250	0.12	-0.9
2,920,129	+		LRK53_RS13250	0.12	-1.9
2,920,129	+		LRK53_RS13250	0.12	-1.0
2,920,130	-		LRK53_RS13250	0.12	-1.4
2,920,130	-		LRK53_RS13250	0.12	-1.5
2,920,130	-		LRK53_RS13250	0.12	-2.2
2,920,149	+		LRK53_RS13250	0.14	-0.1
2,920,149	+		LRK53_RS13250	0.14	+0.9
2,920,153	+		LRK53_RS13250	0.14	-0.9
2,920,153	+		LRK53_RS13250	0.14	-0.4
2,920,153	+		LRK53_RS13250	0.14	-1.4
2,920,153	+		LRK53_RS13250	0.14	-0.1
2,920,153	+		LRK53_RS13250	0.14	-1.4
2,920,153	+		LRK53_RS13250	0.14	-2.0
2,920,153	+		LRK53_RS13250	0.14	-1.5
2,920,153	+		LRK53_RS13250	0.14	-1.4
2,920,153	+		LRK53_RS13250	0.14	+0.9
2,920,153	+		LRK53_RS13250	0.14	-1.7
2,920,154	-		LRK53_RS13250	0.14	-0.1
2,920,154	-		LRK53_RS13250	0.14	+0.2
2,920,154	-		LRK53_RS13250	0.14	-1.1
2,920,154	-		LRK53_RS13250	0.14	-1.7
2,920,154	-		LRK53_RS13250	0.14	-1.7
2,920,154	-		LRK53_RS13250	0.14	+1.9
2,920,209	+		LRK53_RS13250	0.19	-0.9
2,920,209	+		LRK53_RS13250	0.19	+0.4
2,920,209	+		LRK53_RS13250	0.19	-0.1
2,920,209	+		LRK53_RS13250	0.19	-0.1
2,920,209	+		LRK53_RS13250	0.19	-1.4
2,920,210	-		LRK53_RS13250	0.19	-0.1
2,920,210	-		LRK53_RS13250	0.19	-0.8
2,920,210	-		LRK53_RS13250	0.19	-0.1
2,920,210	-		LRK53_RS13250	0.19	+0.2
2,920,210	-		LRK53_RS13250	0.19	-0.7
2,920,210	-		LRK53_RS13250	0.19	-0.7
2,920,258	+		LRK53_RS13250	0.23	-0.1
2,920,312	+		LRK53_RS13250	0.27	-0.9
2,920,312	+		LRK53_RS13250	0.27	-0.7
2,920,312	+		LRK53_RS13250	0.27	-3.0
2,920,313	-		LRK53_RS13250	0.27	-0.7
2,920,381	+		LRK53_RS13250	0.32	-0.7
2,920,381	+		LRK53_RS13250	0.32	-1.1
2,920,381	+		LRK53_RS13250	0.32	-2.0
2,920,381	+		LRK53_RS13250	0.32	-0.1
2,920,382	-		LRK53_RS13250	0.33	+1.9
2,920,382	-		LRK53_RS13250	0.33	+0.9
2,920,382	-		LRK53_RS13250	0.33	-0.7
2,920,382	-		LRK53_RS13250	0.33	+0.9
2,920,382	-		LRK53_RS13250	0.33	-1.4
2,920,382	-		LRK53_RS13250	0.33	-1.0
2,920,645	+		LRK53_RS13250	0.54	-0.1
2,920,687	+		LRK53_RS13250	0.57	-1.4
2,920,687	+		LRK53_RS13250	0.57	-0.4
2,920,687	+		LRK53_RS13250	0.57	+0.2
2,920,687	+		LRK53_RS13250	0.57	+0.9
2,920,687	+		LRK53_RS13250	0.57	+0.9
2,920,687	+		LRK53_RS13250	0.57	+0.3
2,920,687	+		LRK53_RS13250	0.57	-0.8
2,920,687	+		LRK53_RS13250	0.57	-0.3
2,920,687	+		LRK53_RS13250	0.57	-0.8
2,920,687	+		LRK53_RS13250	0.57	+0.9
2,920,687	+		LRK53_RS13250	0.57	-0.1
2,920,687	+		LRK53_RS13250	0.57	-0.1
2,920,687	+		LRK53_RS13250	0.57	-1.1
2,920,688	-		LRK53_RS13250	0.57	+0.3
2,920,688	-		LRK53_RS13250	0.57	-0.3
2,920,688	-		LRK53_RS13250	0.57	-0.1
2,920,688	-		LRK53_RS13250	0.57	-0.9
2,920,688	-		LRK53_RS13250	0.57	-1.4
2,920,688	-		LRK53_RS13250	0.57	-1.1
2,920,688	-		LRK53_RS13250	0.57	-0.0
2,920,688	-		LRK53_RS13250	0.57	-0.4
2,920,688	-		LRK53_RS13250	0.57	+0.9
2,920,688	-		LRK53_RS13250	0.57	-0.8
2,920,688	-		LRK53_RS13250	0.57	-1.1