Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12405

Experiment: R2A_PIPES with Nickel (II) chloride 848 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Nickel (II) chloride 848 uM
2,753,318	+		LRK53_RS12395	0.81	-1.4
2,753,318	+		LRK53_RS12395	0.81	+0.9
2,753,318	+		LRK53_RS12395	0.81	-1.4
2,753,319	-		LRK53_RS12395	0.81	-1.1
2,753,319	-		LRK53_RS12395	0.81	-0.1
2,753,319	-		LRK53_RS12395	0.81	-0.4
2,753,381	+				-0.9
2,753,381	+				-0.7
2,753,381	+				-1.9
2,753,381	+				-1.0
2,753,381	+				-2.1
2,753,456	+				-0.1
2,753,456	+				-1.0
2,753,456	+				-1.1
2,753,456	+				-1.4
2,753,456	+				-1.4
2,753,457	-				-1.4
2,753,457	-				-1.2
2,753,457	-				-1.4
2,753,457	-				-0.7
2,753,457	-				-0.8
2,753,485	+				-1.7
2,753,485	+				-0.4
2,753,485	+				+0.2
2,753,485	+				-0.1
2,753,485	+				+0.9
2,753,485	+				-0.7
2,753,486	-				+0.5
2,753,486	-				+0.6
2,753,486	-				-1.8
2,753,486	-				-1.7
2,753,486	-				-0.9
2,753,486	-				-1.4
2,753,486	-				-1.1
2,753,486	-				-1.4
2,753,645	+				+0.2
2,753,645	+				-2.4
2,753,645	+				-0.7
2,753,645	+				-1.9
2,753,645	+				+0.2
2,753,645	+				-1.3
2,753,645	+				-2.5
2,753,645	+				-1.5
2,753,646	-				-0.7
2,753,646	-				-1.5
2,753,646	-				-0.9
2,753,646	-				-1.0
2,753,646	-				-2.4
2,753,646	-				-0.7
2,753,646	-				-1.7
2,753,646	-				+2.5
2,753,747	+		LRK53_RS12400	0.25	-1.0
2,753,747	+		LRK53_RS12400	0.25	-1.7
2,753,748	-		LRK53_RS12400	0.25	-2.3
2,753,748	-		LRK53_RS12400	0.25	-1.9
2,753,748	-		LRK53_RS12400	0.25	+0.9
2,753,779	+		LRK53_RS12400	0.29	-0.9
2,753,850	+		LRK53_RS12400	0.40	-0.9
2,753,852	+		LRK53_RS12400	0.40	-0.8
2,753,852	+		LRK53_RS12400	0.40	-1.3
2,753,852	+		LRK53_RS12400	0.40	-0.7
2,753,852	+		LRK53_RS12400	0.40	-0.4
2,753,852	+		LRK53_RS12400	0.40	-2.3
2,753,853	-		LRK53_RS12400	0.40	-1.6
2,753,853	-		LRK53_RS12400	0.40	-1.1
2,753,853	-		LRK53_RS12400	0.40	+0.3
2,753,853	-		LRK53_RS12400	0.40	-1.7
2,753,853	-		LRK53_RS12400	0.40	+0.9
2,753,897	+		LRK53_RS12400	0.47	-1.6
2,753,897	+		LRK53_RS12400	0.47	+1.9
2,753,897	+		LRK53_RS12400	0.47	+1.9
2,753,897	+		LRK53_RS12400	0.47	+0.7
2,753,898	-		LRK53_RS12400	0.47	-0.1
2,753,898	-		LRK53_RS12400	0.47	-0.1
2,753,906	+		LRK53_RS12400	0.48	+0.9
2,753,906	+		LRK53_RS12400	0.48	+0.3
2,753,906	+		LRK53_RS12400	0.48	-1.0
2,753,906	+		LRK53_RS12400	0.48	+0.2
2,753,907	-		LRK53_RS12400	0.48	-0.1
2,753,907	-		LRK53_RS12400	0.48	-1.5
2,754,074	+		LRK53_RS12400	0.73	-0.4
2,754,074	+		LRK53_RS12400	0.73	+0.9
2,754,075	-		LRK53_RS12400	0.73	-1.8
2,754,329	-				-1.9
2,754,329	-				-1.3
2,754,329	-				-1.1
2,754,457	+		LRK53_RS12405	0.41	-2.2
2,754,457	+		LRK53_RS12405	0.41	-1.4
2,754,458	-		LRK53_RS12405	0.41	-1.9
2,754,571	+		LRK53_RS12405	0.71	-1.5
2,754,571	+		LRK53_RS12405	0.71	-0.7
2,754,571	+		LRK53_RS12405	0.71	-1.3
2,754,571	+		LRK53_RS12405	0.71	-0.4
2,754,571	+		LRK53_RS12405	0.71	-0.1
2,754,571	+		LRK53_RS12405	0.71	-0.7
2,754,572	-		LRK53_RS12405	0.71	-0.7
2,754,572	-		LRK53_RS12405	0.71	-0.7
2,754,572	-		LRK53_RS12405	0.71	-1.1
2,754,572	-		LRK53_RS12405	0.71	-1.7
2,754,572	-		LRK53_RS12405	0.71	-1.1
2,754,572	-		LRK53_RS12405	0.71	-1.3
2,754,601	+		LRK53_RS12405	0.79	-1.3
2,754,602	-		LRK53_RS12405	0.79	-0.4
2,754,602	-		LRK53_RS12405	0.79	-0.7
2,754,602	-		LRK53_RS12405	0.79	-0.3
2,754,829	+				-0.4
2,755,210	+		LRK53_RS12410	0.29	-0.4
2,755,211	-		LRK53_RS12410	0.29	-1.7
2,755,211	-		LRK53_RS12410	0.29	-0.7
2,755,594	+		LRK53_RS12410	0.55	-0.7
2,755,594	+		LRK53_RS12410	0.55	+0.9
2,755,594	+		LRK53_RS12410	0.55	+1.3
2,755,594	+		LRK53_RS12410	0.55	-0.4
2,755,594	+		LRK53_RS12410	0.55	-0.7
2,755,594	+		LRK53_RS12410	0.55	-1.7
2,755,594	+		LRK53_RS12410	0.55	-1.3
2,755,594	+		LRK53_RS12410	0.55	+0.9
2,755,594	+		LRK53_RS12410	0.55	-0.1
2,755,594	+		LRK53_RS12410	0.55	-1.0
2,755,594	+		LRK53_RS12410	0.55	-0.7
2,755,594	+		LRK53_RS12410	0.55	+0.9
2,755,594	+		LRK53_RS12410	0.55	-0.4
2,755,594	+		LRK53_RS12410	0.55	-3.5
2,755,594	+		LRK53_RS12410	0.55	-1.1
2,755,594	+		LRK53_RS12410	0.55	+0.9
2,755,594	+		LRK53_RS12410	0.55	+0.1
2,755,594	+		LRK53_RS12410	0.55	+0.2
2,755,594	+		LRK53_RS12410	0.55	-1.7
2,755,594	+		LRK53_RS12410	0.55	-2.0
2,755,594	+		LRK53_RS12410	0.55	-1.1
2,755,594	+		LRK53_RS12410	0.55	-1.2
2,755,594	+		LRK53_RS12410	0.55	+0.5
2,755,594	+		LRK53_RS12410	0.55	-0.1
2,755,594	+		LRK53_RS12410	0.55	-1.7
2,755,594	+		LRK53_RS12410	0.55	-0.7
2,755,594	+		LRK53_RS12410	0.55	-1.1
2,755,594	+		LRK53_RS12410	0.55	-1.4
2,755,594	+		LRK53_RS12410	0.55	-1.1
2,755,594	+		LRK53_RS12410	0.55	-1.4
2,755,594	+		LRK53_RS12410	0.55	+0.3
2,755,594	+		LRK53_RS12410	0.55	-0.6
2,755,594	+		LRK53_RS12410	0.55	-1.7
2,755,594	+		LRK53_RS12410	0.55	-1.4
2,755,594	+		LRK53_RS12410	0.55	+0.9
2,755,594	+		LRK53_RS12410	0.55	-1.5
2,755,594	+		LRK53_RS12410	0.55	+0.9
2,755,594	+		LRK53_RS12410	0.55	-1.4
2,755,594	+		LRK53_RS12410	0.55	-1.1
2,755,594	+		LRK53_RS12410	0.55	+0.9
2,755,594	+		LRK53_RS12410	0.55	-0.1
2,755,594	+		LRK53_RS12410	0.55	-0.5
2,755,595	-		LRK53_RS12410	0.55	-2.1
2,755,595	-		LRK53_RS12410	0.55	-1.1
2,755,595	-		LRK53_RS12410	0.55	-0.8
2,755,595	-		LRK53_RS12410	0.55	-1.1
2,755,595	-		LRK53_RS12410	0.55	-2.3
2,755,595	-		LRK53_RS12410	0.55	-0.1
2,755,595	-		LRK53_RS12410	0.55	-1.7
2,755,595	-		LRK53_RS12410	0.55	-0.9
2,755,595	-		LRK53_RS12410	0.55	-1.6
2,755,595	-		LRK53_RS12410	0.55	-0.8
2,755,595	-		LRK53_RS12410	0.55	-1.1
2,755,595	-		LRK53_RS12410	0.55	+0.9
2,755,595	-		LRK53_RS12410	0.55	-0.1
2,755,595	-		LRK53_RS12410	0.55	-0.5
2,755,595	-		LRK53_RS12410	0.55	-0.3
2,755,595	-		LRK53_RS12410	0.55	-0.7
2,755,595	-		LRK53_RS12410	0.55	-0.1
2,755,595	-		LRK53_RS12410	0.55	-1.5
2,755,595	-		LRK53_RS12410	0.55	+0.9
2,755,595	-		LRK53_RS12410	0.55	-0.7
2,755,595	-		LRK53_RS12410	0.55	-1.1
2,755,595	-		LRK53_RS12410	0.55	-0.7
2,755,595	-		LRK53_RS12410	0.55	-1.7
2,755,595	-		LRK53_RS12410	0.55	+0.3
2,755,595	-		LRK53_RS12410	0.55	+0.3
2,755,595	-		LRK53_RS12410	0.55	-0.7
2,755,595	-		LRK53_RS12410	0.55	+0.2
2,755,595	-		LRK53_RS12410	0.55	-2.5
2,755,595	-		LRK53_RS12410	0.55	-1.4
2,755,595	-		LRK53_RS12410	0.55	-1.4
2,755,595	-		LRK53_RS12410	0.55	-1.1
2,755,630	+		LRK53_RS12410	0.57	-0.1
2,755,630	+		LRK53_RS12410	0.57	+0.9
2,755,631	-		LRK53_RS12410	0.57	-1.4
2,755,631	-		LRK53_RS12410	0.57	+1.9
2,755,631	-		LRK53_RS12410	0.57	-0.7