Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08135

Experiment: R2A_PIPES with Nickel (II) chloride 848 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Nickel (II) chloride 848 uM
1,826,794	+				-1.8
1,826,794	+				-2.3
1,826,794	+				-0.1
1,826,794	+				-1.1
1,826,794	+				-1.2
1,826,794	+				-0.7
1,826,794	+				-1.9
1,826,794	+				-1.7
1,826,795	-				-1.8
1,826,795	-				+0.3
1,826,795	-				-0.9
1,826,795	-				+0.1
1,826,795	-				-2.1
1,826,795	-				-2.1
1,826,795	-				-1.2
1,826,815	+				-0.7
1,826,815	+				-1.4
1,826,815	+				-1.1
1,826,815	+				+0.0
1,826,815	+				-1.9
1,826,815	+				+0.1
1,826,815	+				-1.7
1,826,815	+				-2.0
1,826,815	+				-3.2
1,826,815	+				-1.3
1,826,815	+				-1.4
1,826,815	+				+0.9
1,826,815	+				-0.7
1,826,815	+				-0.7
1,826,816	-				-2.8
1,826,816	-				-2.3
1,826,816	-				-0.4
1,826,816	-				-1.4
1,826,816	-				-3.0
1,826,816	-				-0.7
1,826,816	-				-1.0
1,826,816	-				-2.3
1,826,816	-				+0.9
1,826,816	-				-1.3
1,826,816	-				+0.1
1,826,816	-				-1.1
1,826,816	-				-1.2
1,826,816	-				-3.6
1,826,816	-				-0.9
1,826,893	+				-1.2
1,826,893	+				-1.4
1,826,893	+				-1.2
1,826,893	+				-0.4
1,826,893	+				-1.1
1,826,893	+				-0.9
1,826,893	+				-1.5
1,826,893	+				+0.9
1,826,893	+				-1.4
1,826,893	+				-2.3
1,826,893	+				-1.1
1,826,893	+				-0.1
1,826,893	+				-1.9
1,826,893	+				-1.5
1,826,893	+				-0.9
1,826,893	+				-0.9
1,826,893	+				-0.1
1,826,893	+				+0.9
1,826,893	+				+0.5
1,826,893	+				-1.6
1,826,894	-				-1.2
1,826,894	-				-1.0
1,826,894	-				-0.1
1,826,894	-				-2.5
1,826,894	-				-1.8
1,826,894	-				-2.5
1,826,894	-				-0.4
1,826,894	-				+0.9
1,826,894	-				-2.8
1,826,894	-				-0.1
1,826,894	-				-1.1
1,826,894	-				-2.1
1,826,894	-				-1.2
1,826,894	-				-1.0
1,826,894	-				-2.0
1,826,894	-				-1.4
1,826,894	-				-1.5
1,826,894	-				-0.9
1,826,895	+				-1.4
1,826,895	+				-0.1
1,826,896	-				+0.9
1,826,896	-				-0.1
1,826,923	+				-1.4
1,826,923	+				-1.7
1,826,923	+				-0.4
1,826,923	+				-0.8
1,826,923	+				-0.1
1,826,923	+				-0.1
1,826,923	+				-0.9
1,826,923	+				-1.4
1,826,923	+				-1.0
1,826,923	+				-1.5
1,826,923	+				-1.2
1,826,923	+				-1.3
1,826,923	+				-0.1
1,826,923	+				-0.8
1,826,923	+				-1.7
1,826,924	-				-3.1
1,826,924	-				+0.9
1,826,924	-				-0.6
1,826,924	-				-1.1
1,826,924	-				-1.1
1,826,924	-				-1.2
1,826,924	-				-0.1
1,826,924	-				-0.7
1,826,924	-				-0.7
1,826,924	-				-0.3
1,826,924	-				-1.1
1,826,924	-				-0.1
1,826,924	-				+0.9
1,826,924	-				-1.2
1,826,924	-				-0.4
1,826,924	-				-1.5
1,826,924	-				-1.0
1,826,962	+				-1.2
1,826,962	+				-2.7
1,826,962	+				-1.9
1,826,962	+				-1.9
1,826,963	-				-3.3
1,826,963	-				-2.0
1,826,963	-				-2.3
1,826,963	-				-0.4
1,826,963	-				-0.5
1,826,963	-				+0.5
1,827,011	+				+0.3
1,827,049	+				+0.5
1,827,049	+				-0.7
1,827,049	+				+0.3
1,827,049	+				-0.1
1,827,049	+				+1.6
1,827,050	-				-1.9
1,827,050	-				-0.7
1,827,050	-				-2.1
1,827,050	-				-0.4
1,827,147	+		LRK53_RS08130	0.16	-0.1
1,827,147	+		LRK53_RS08130	0.16	+0.9
1,827,147	+		LRK53_RS08130	0.16	+1.3
1,827,147	+		LRK53_RS08130	0.16	-2.1
1,827,147	+		LRK53_RS08130	0.16	-0.9
1,827,147	+		LRK53_RS08130	0.16	-2.3
1,827,147	+		LRK53_RS08130	0.16	-0.4
1,827,148	-		LRK53_RS08130	0.16	+0.9
1,827,148	-		LRK53_RS08130	0.16	-0.7
1,827,148	-		LRK53_RS08130	0.16	-1.7
1,827,148	-		LRK53_RS08130	0.16	-0.1
1,827,148	-		LRK53_RS08130	0.16	-0.5
1,827,148	-		LRK53_RS08130	0.16	-0.1
1,827,148	-		LRK53_RS08130	0.16	+0.1
1,827,148	-		LRK53_RS08130	0.16	+0.9
1,827,148	-		LRK53_RS08130	0.16	-0.1
1,827,311	-		LRK53_RS08130	0.39	-0.1
1,827,312	+		LRK53_RS08130	0.39	-0.9
1,827,312	+		LRK53_RS08130	0.39	-0.7
1,827,312	+		LRK53_RS08130	0.39	-2.3
1,827,312	+		LRK53_RS08130	0.39	+0.9
1,827,312	+		LRK53_RS08130	0.39	-0.7
1,827,312	+		LRK53_RS08130	0.39	-1.4
1,827,312	+		LRK53_RS08130	0.39	-3.4
1,827,312	+		LRK53_RS08130	0.39	-3.4
1,827,313	-		LRK53_RS08130	0.39	-0.7
1,827,313	-		LRK53_RS08130	0.39	-1.4
1,827,313	-		LRK53_RS08130	0.39	-1.0
1,827,313	-		LRK53_RS08130	0.39	-1.7
1,827,313	-		LRK53_RS08130	0.39	-0.3
1,827,313	-		LRK53_RS08130	0.39	-0.6
1,827,313	-		LRK53_RS08130	0.39	+0.1
1,827,313	-		LRK53_RS08130	0.39	-1.3
1,827,313	-		LRK53_RS08130	0.39	-2.3
1,827,313	-		LRK53_RS08130	0.39	-1.3
1,827,313	-		LRK53_RS08130	0.39	-0.9
1,827,313	-		LRK53_RS08130	0.39	-1.2
1,827,313	-		LRK53_RS08130	0.39	-0.2
1,827,537	+		LRK53_RS08130	0.70	-1.1
1,827,537	+		LRK53_RS08130	0.70	-0.1
1,827,537	+		LRK53_RS08130	0.70	-0.1
1,827,537	+		LRK53_RS08130	0.70	-0.4
1,827,537	+		LRK53_RS08130	0.70	-1.1
1,827,537	+		LRK53_RS08130	0.70	-1.4
1,827,537	+		LRK53_RS08130	0.70	-1.1
1,827,537	+		LRK53_RS08130	0.70	+0.1
1,827,537	+		LRK53_RS08130	0.70	-0.1
1,827,537	+		LRK53_RS08130	0.70	-1.5
1,827,538	-		LRK53_RS08130	0.70	-0.1
1,827,538	-		LRK53_RS08130	0.70	-1.7
1,827,538	-		LRK53_RS08130	0.70	-0.4
1,827,538	-		LRK53_RS08130	0.70	-2.6
1,827,538	-		LRK53_RS08130	0.70	-0.9
1,827,538	-		LRK53_RS08130	0.70	+0.3
1,827,538	-		LRK53_RS08130	0.70	-1.0
1,827,538	-		LRK53_RS08130	0.70	+0.6
1,827,538	-		LRK53_RS08130	0.70	-1.4
1,827,538	-		LRK53_RS08130	0.70	-1.4
1,827,538	-		LRK53_RS08130	0.70	+0.9
1,827,538	-		LRK53_RS08130	0.70	-2.0
1,827,594	+		LRK53_RS08130	0.78	-1.3
1,827,594	+		LRK53_RS08130	0.78	+0.2
1,827,627	+		LRK53_RS08130	0.82	-1.0
1,827,627	+		LRK53_RS08130	0.82	-0.4
1,827,627	+		LRK53_RS08130	0.82	-1.5
1,827,627	+		LRK53_RS08130	0.82	-1.1
1,827,627	+		LRK53_RS08130	0.82	-0.7
1,827,627	+		LRK53_RS08130	0.82	-0.3
1,827,628	-		LRK53_RS08130	0.83	-1.7
1,827,628	-		LRK53_RS08130	0.83	-1.6
1,827,628	-		LRK53_RS08130	0.83	-1.1
1,827,775	+				-1.9
1,827,776	-				-0.7
1,827,776	-				-0.4
1,828,001	+		LRK53_RS08135	0.14	-2.2
1,828,103	+		LRK53_RS08135	0.19	-1.1
1,828,103	+		LRK53_RS08135	0.19	-0.5
1,828,103	+		LRK53_RS08135	0.19	-0.7
1,828,103	+		LRK53_RS08135	0.19	+0.9
1,828,104	-		LRK53_RS08135	0.19	-1.7
1,828,104	-		LRK53_RS08135	0.19	-0.1
1,828,104	-		LRK53_RS08135	0.19	-2.1
1,828,104	-		LRK53_RS08135	0.19	+0.9
1,828,104	-		LRK53_RS08135	0.19	-0.1
1,828,104	-		LRK53_RS08135	0.19	-1.1
1,828,104	-		LRK53_RS08135	0.19	-2.4
1,828,223	+		LRK53_RS08135	0.26	+0.9
1,828,223	+		LRK53_RS08135	0.26	-0.1
1,828,223	+		LRK53_RS08135	0.26	-1.4
1,828,223	+		LRK53_RS08135	0.26	-1.9
1,828,223	+		LRK53_RS08135	0.26	+0.5
1,828,223	+		LRK53_RS08135	0.26	-0.4
1,828,223	+		LRK53_RS08135	0.26	+0.9
1,828,224	-		LRK53_RS08135	0.26	-2.6
1,828,224	-		LRK53_RS08135	0.26	-1.7
1,828,224	-		LRK53_RS08135	0.26	-2.4
1,828,224	-		LRK53_RS08135	0.26	-1.2
1,828,224	-		LRK53_RS08135	0.26	-0.1
1,828,224	-		LRK53_RS08135	0.26	-0.4
1,828,224	-		LRK53_RS08135	0.26	-1.4
1,828,224	-		LRK53_RS08135	0.26	-2.2
1,828,247	-		LRK53_RS08135	0.27	-1.3
1,828,247	-		LRK53_RS08135	0.27	-1.9
1,828,247	-		LRK53_RS08135	0.27	-1.9
1,828,313	+		LRK53_RS08135	0.31	-1.0
1,828,313	+		LRK53_RS08135	0.31	-0.4
1,828,314	-		LRK53_RS08135	0.31	-0.5
1,828,314	-		LRK53_RS08135	0.31	-1.1
1,828,314	-		LRK53_RS08135	0.31	-2.9
1,828,314	-		LRK53_RS08135	0.31	-2.6
1,828,314	-		LRK53_RS08135	0.31	-0.1
1,828,371	+		LRK53_RS08135	0.34	-0.9
1,828,371	+		LRK53_RS08135	0.34	-1.8
1,828,371	+		LRK53_RS08135	0.34	+0.1
1,828,371	+		LRK53_RS08135	0.34	-2.1
1,828,371	+		LRK53_RS08135	0.34	-0.4
1,828,371	+		LRK53_RS08135	0.34	-0.4
1,828,371	+		LRK53_RS08135	0.34	-1.6
1,828,371	+		LRK53_RS08135	0.34	-1.4
1,828,371	+		LRK53_RS08135	0.34	+1.9
1,828,371	+		LRK53_RS08135	0.34	-1.1
1,828,372	-		LRK53_RS08135	0.34	-0.7
1,828,372	-		LRK53_RS08135	0.34	+1.5
1,828,372	-		LRK53_RS08135	0.34	-1.7
1,828,372	-		LRK53_RS08135	0.34	+0.9
1,828,372	-		LRK53_RS08135	0.34	-0.9
1,828,372	-		LRK53_RS08135	0.34	-0.7
1,828,372	-		LRK53_RS08135	0.34	-2.2
1,828,372	-		LRK53_RS08135	0.34	+1.3
1,828,372	-		LRK53_RS08135	0.34	-1.9
1,828,470	-		LRK53_RS08135	0.39	-3.0
1,828,679	+		LRK53_RS08135	0.51	-1.9
1,828,809	+		LRK53_RS08135	0.58	-1.9
1,828,809	+		LRK53_RS08135	0.58	-2.1
1,828,809	+		LRK53_RS08135	0.58	+0.3
1,828,810	-		LRK53_RS08135	0.58	+0.9
1,828,810	-		LRK53_RS08135	0.58	-0.4
1,828,810	-		LRK53_RS08135	0.58	-1.1
1,828,810	-		LRK53_RS08135	0.58	-1.1
1,828,859	+		LRK53_RS08135	0.61	-1.9
1,828,859	+		LRK53_RS08135	0.61	-1.5
1,828,859	+		LRK53_RS08135	0.61	-1.1
1,828,859	+		LRK53_RS08135	0.61	-1.0
1,828,859	+		LRK53_RS08135	0.61	+0.3
1,828,860	-		LRK53_RS08135	0.61	-0.7
1,828,860	-		LRK53_RS08135	0.61	-1.4
1,828,860	-		LRK53_RS08135	0.61	-1.5
1,828,860	-		LRK53_RS08135	0.61	+0.3
1,828,860	-		LRK53_RS08135	0.61	-1.9
1,828,860	-		LRK53_RS08135	0.61	-0.5
1,828,860	-		LRK53_RS08135	0.61	-2.1
1,828,860	-		LRK53_RS08135	0.61	+0.0
1,828,860	-		LRK53_RS08135	0.61	-0.8
1,828,860	-		LRK53_RS08135	0.61	-1.9
1,828,860	-		LRK53_RS08135	0.61	-0.7
1,828,860	-		LRK53_RS08135	0.61	-1.0
1,828,861	-		LRK53_RS08135	0.61	-1.7
1,828,883	+		LRK53_RS08135	0.62	-2.6
1,828,903	+		LRK53_RS08135	0.63	-2.1
1,828,903	+		LRK53_RS08135	0.63	-2.4
1,828,903	+		LRK53_RS08135	0.63	+1.9
1,828,903	+		LRK53_RS08135	0.63	+0.3
1,828,903	+		LRK53_RS08135	0.63	-0.7
1,828,903	+		LRK53_RS08135	0.63	-1.2
1,828,903	+		LRK53_RS08135	0.63	-0.1
1,828,903	+		LRK53_RS08135	0.63	+0.9
1,828,903	+		LRK53_RS08135	0.63	-2.3
1,828,904	-		LRK53_RS08135	0.63	-0.9
1,828,904	-		LRK53_RS08135	0.63	+0.5
1,828,904	-		LRK53_RS08135	0.63	-1.7
1,828,904	-		LRK53_RS08135	0.63	-0.1
1,828,904	-		LRK53_RS08135	0.63	-1.6
1,828,904	-		LRK53_RS08135	0.63	+0.6
1,828,904	-		LRK53_RS08135	0.63	-1.3
1,828,904	-		LRK53_RS08135	0.63	-0.7
1,828,904	-		LRK53_RS08135	0.63	-0.9
1,828,904	-		LRK53_RS08135	0.63	-0.1
1,828,991	+		LRK53_RS08135	0.68	-1.1
1,828,991	+		LRK53_RS08135	0.68	-0.1
1,828,992	-		LRK53_RS08135	0.68	-0.9
1,828,992	-		LRK53_RS08135	0.68	-1.1
1,829,102	+		LRK53_RS08135	0.74	+0.1
1,829,103	-		LRK53_RS08135	0.74	-1.6
1,829,103	-		LRK53_RS08135	0.74	-1.1
1,829,103	-		LRK53_RS08135	0.74	+0.3
1,829,103	-		LRK53_RS08135	0.74	-1.4
1,829,108	+		LRK53_RS08135	0.74	-0.1
1,829,109	-		LRK53_RS08135	0.74	-1.4
1,829,194	+		LRK53_RS08135	0.79	-1.9
1,829,283	-		LRK53_RS08135	0.84	-0.1
1,829,283	-		LRK53_RS08135	0.84	-0.1
1,829,312	+		LRK53_RS08135	0.85	+0.9
1,829,312	+		LRK53_RS08135	0.85	-2.3
1,829,312	+		LRK53_RS08135	0.85	-1.1
1,829,312	+		LRK53_RS08135	0.85	-0.9
1,829,312	+		LRK53_RS08135	0.85	-0.1
1,829,312	+		LRK53_RS08135	0.85	+0.1
1,829,312	+		LRK53_RS08135	0.85	-0.7
1,829,313	-		LRK53_RS08135	0.85	-1.1
1,829,313	-		LRK53_RS08135	0.85	-1.3
1,829,313	-		LRK53_RS08135	0.85	-0.9
1,829,480	+				-1.7
1,829,481	-				-0.7
1,829,556	+				-2.1
1,829,557	-				-0.1
1,829,557	-				+1.9
1,829,575	+				-0.1
1,829,577	+				-2.0
1,829,577	+				-2.2
1,829,577	+				-0.6
1,829,577	+				-1.1
1,829,577	+				-1.7
1,829,577	+				-0.9
1,829,577	+				-1.5
1,829,578	-				-0.6
1,829,578	-				+0.9
1,829,578	-				-0.7
1,829,578	-				-1.8
1,829,578	-				-0.8
1,829,578	-				-1.3
1,829,578	-				-1.4
1,829,578	-				-0.1
1,829,578	-				-0.1
1,829,786	+				+0.5
1,829,787	-				-1.6
1,829,787	-				-1.1
1,829,787	-				-2.1
1,829,787	-				-0.2
1,829,806	+				+0.1
1,829,806	+				-0.8
1,829,806	+				-0.3
1,829,806	+				+0.9
1,829,806	+				-0.4
1,829,806	+				-3.1
1,829,806	+				-1.7
1,829,807	-				-0.3
1,829,807	-				+0.5
1,829,807	-				-0.1
1,829,807	-				-0.1
1,829,807	-				-0.9
1,829,807	-				+0.9
1,829,807	-				-1.9
1,829,807	-				-0.1
1,829,813	+				-0.7
1,829,813	+				-1.9
1,829,813	+				-1.6
1,829,813	+				+0.9
1,829,813	+				-1.1
1,829,814	-				+0.6
1,829,814	-				-1.1
1,829,918	+		LRK53_RS08140	0.31	+1.2
1,829,918	+		LRK53_RS08140	0.31	-2.6
1,829,918	+		LRK53_RS08140	0.31	-0.5
1,829,919	-		LRK53_RS08140	0.31	-0.4
1,830,045	+		LRK53_RS08140	0.63	-0.4
1,830,045	+		LRK53_RS08140	0.63	-1.2
1,830,045	+		LRK53_RS08140	0.63	-1.0
1,830,045	+		LRK53_RS08140	0.63	-0.1
1,830,046	-		LRK53_RS08140	0.63	-0.7
1,830,046	-		LRK53_RS08140	0.63	-2.1
1,830,046	-		LRK53_RS08140	0.63	-1.0
1,830,265	+				-0.5
1,830,266	-				-1.1
1,830,266	-				-0.1