Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS01215

Experiment: R2A_PIPES with Nickel (II) chloride 848 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Nickel (II) chloride 848 uM
299,269	+		LRK53_RS01210	0.28	+0.4
299,269	+		LRK53_RS01210	0.28	-1.0
299,270	-		LRK53_RS01210	0.28	-1.1
299,270	-		LRK53_RS01210	0.28	-1.6
299,270	-		LRK53_RS01210	0.28	-1.4
299,272	-		LRK53_RS01210	0.28	-1.4
299,272	-		LRK53_RS01210	0.28	+0.0
299,398	+		LRK53_RS01210	0.43	-0.3
299,398	+		LRK53_RS01210	0.43	+0.6
299,398	+		LRK53_RS01210	0.43	-0.5
299,398	+		LRK53_RS01210	0.43	+0.0
299,398	+		LRK53_RS01210	0.43	-2.0
299,398	+		LRK53_RS01210	0.43	+1.0
299,398	+		LRK53_RS01210	0.43	+1.6
299,398	+		LRK53_RS01210	0.43	+1.0
299,399	-		LRK53_RS01210	0.43	-2.3
299,399	-		LRK53_RS01210	0.43	+0.0
299,399	-		LRK53_RS01210	0.43	-0.3
299,399	-		LRK53_RS01210	0.43	-0.2
299,399	-		LRK53_RS01210	0.43	+0.0
299,411	+		LRK53_RS01210	0.44	-1.5
299,411	+		LRK53_RS01210	0.44	+1.0
299,411	+		LRK53_RS01210	0.44	-1.5
299,411	+		LRK53_RS01210	0.44	-0.2
299,411	+		LRK53_RS01210	0.44	-0.5
299,411	+		LRK53_RS01210	0.44	+1.0
299,412	-		LRK53_RS01210	0.44	-1.0
299,412	-		LRK53_RS01210	0.44	-1.4
299,412	-		LRK53_RS01210	0.44	+1.0
299,412	-		LRK53_RS01210	0.44	+1.0
299,412	-		LRK53_RS01210	0.44	-0.7
299,461	+		LRK53_RS01210	0.50	-1.8
299,461	+		LRK53_RS01210	0.50	-0.5
299,461	+		LRK53_RS01210	0.50	-1.8
299,461	+		LRK53_RS01210	0.50	-3.1
299,461	+		LRK53_RS01210	0.50	-0.9
299,462	-		LRK53_RS01210	0.50	-1.5
299,462	-		LRK53_RS01210	0.50	-0.8
299,462	-		LRK53_RS01210	0.50	-1.3
299,541	+		LRK53_RS01210	0.60	-1.5
299,541	+		LRK53_RS01210	0.60	-0.3
299,541	+		LRK53_RS01210	0.60	-1.1
299,541	+		LRK53_RS01210	0.60	-0.4
299,541	+		LRK53_RS01210	0.60	-0.3
299,542	-		LRK53_RS01210	0.60	+1.0
299,542	-		LRK53_RS01210	0.60	-1.3
299,542	-		LRK53_RS01210	0.60	+0.1
299,542	-		LRK53_RS01210	0.60	+1.0
299,542	-		LRK53_RS01210	0.60	-1.7
299,677	+		LRK53_RS01210	0.76	-0.5
299,677	+		LRK53_RS01210	0.76	-1.5
299,677	+		LRK53_RS01210	0.76	-1.0
299,677	+		LRK53_RS01210	0.76	-1.3
299,678	-		LRK53_RS01210	0.76	-1.2
299,678	-		LRK53_RS01210	0.76	-1.2
299,678	-		LRK53_RS01210	0.76	-0.2
299,678	-		LRK53_RS01210	0.76	-0.6
299,678	-		LRK53_RS01210	0.76	+1.0
299,678	-		LRK53_RS01210	0.76	-0.5
299,678	-		LRK53_RS01210	0.76	+0.4
299,695	+		LRK53_RS01210	0.78	-0.6
299,695	+		LRK53_RS01210	0.78	+0.5
299,695	+		LRK53_RS01210	0.78	+0.8
299,696	-		LRK53_RS01210	0.78	+2.0
299,696	-		LRK53_RS01210	0.78	-1.3
299,696	-		LRK53_RS01210	0.78	-1.2
299,696	-		LRK53_RS01210	0.78	-1.5
299,774	-		LRK53_RS01210	0.87	+2.0
299,774	-		LRK53_RS01210	0.87	-0.9
299,857	+				-1.8
299,857	+				+1.0
299,858	-				-0.6
299,858	-				-0.5
299,858	-				-0.7
299,858	-				+1.0
299,858	-				-2.0
299,869	+				-1.4
299,869	+				-1.2
299,869	+				-0.5
299,869	+				+0.6
299,869	+				-0.2
299,869	+				+0.5
299,869	+				-2.3
299,869	+				+1.6
299,870	-				-0.3
299,870	-				-0.5
299,870	-				-0.5
300,049	+				+1.0
300,049	+				-1.3
300,051	+				-1.8
300,051	+				+0.9
300,051	+				-0.5
300,051	+				-0.9
300,051	+				-1.0
300,052	-				-1.0
300,052	-				-0.8
300,052	-				+0.0
300,052	-				-1.6
300,052	-				-1.4
300,052	-				-0.3
300,052	-				-0.7
300,052	-				-1.3
300,052	-				-1.4
300,052	-				+0.0
300,082	+				-1.4
300,082	+				+2.6
300,083	-				-1.5
300,083	-				-1.4
300,087	+				+0.5
300,087	+				-1.0
300,088	-				-1.9
300,088	-				-1.7
300,088	-				-1.3
300,088	-				-3.3
300,247	+				-0.5
300,248	-				+0.5
300,248	-				-0.3
300,248	-				-0.5
300,248	-				-0.5
300,248	-				-0.5
300,254	+				+1.0
300,255	-				+0.0
300,263	-				-1.3
300,263	-				-1.5
300,263	-				-1.0
300,268	+				-1.3
300,268	+				-1.3
300,268	+				+1.0
300,268	+				-1.0
300,268	+				-2.1
300,268	+				-1.6
300,268	+				-1.0
300,268	+				+2.0
300,268	+				-0.4
300,268	+				-1.2
300,268	+				+0.2
300,268	+				-0.2
300,269	-				+1.0
300,269	-				-2.1
300,269	-				+2.0
300,269	-				+0.0
300,269	-				-1.8
300,269	-				-1.1
300,269	-				-0.5
300,269	-				+1.0
300,269	-				-0.2
300,269	-				-1.4
300,269	-				-1.9
300,269	-				-1.0
300,269	-				-0.8
300,269	-				-0.5
300,269	-				-1.3
300,269	-				-1.0
300,327	+		LRK53_RS01215	0.20	-0.7
300,327	+		LRK53_RS01215	0.20	-1.5
300,327	+		LRK53_RS01215	0.20	-1.5
300,328	-		LRK53_RS01215	0.20	-1.0
300,482	-		LRK53_RS01215	0.63	-0.8
300,518	+		LRK53_RS01215	0.72	-1.7
300,518	+		LRK53_RS01215	0.72	-1.0
300,518	+		LRK53_RS01215	0.72	+0.0
300,518	+		LRK53_RS01215	0.72	-1.8
300,518	+		LRK53_RS01215	0.72	-0.3
300,518	+		LRK53_RS01215	0.72	-0.3
300,518	+		LRK53_RS01215	0.72	-0.5
300,518	+		LRK53_RS01215	0.72	-0.5
300,519	-		LRK53_RS01215	0.73	-0.7
300,519	-		LRK53_RS01215	0.73	+0.0
300,519	-		LRK53_RS01215	0.73	-1.3
300,519	-		LRK53_RS01215	0.73	+0.5
300,519	-		LRK53_RS01215	0.73	+0.5
300,519	-		LRK53_RS01215	0.73	-1.2
300,519	-		LRK53_RS01215	0.73	+0.5
300,519	-		LRK53_RS01215	0.73	+0.0
300,519	-		LRK53_RS01215	0.73	-3.0
300,521	+		LRK53_RS01215	0.73	-0.5
300,521	+		LRK53_RS01215	0.73	-1.8
300,521	+		LRK53_RS01215	0.73	+0.0
300,521	+		LRK53_RS01215	0.73	-0.5
300,521	+		LRK53_RS01215	0.73	-2.8
300,521	+		LRK53_RS01215	0.73	-1.4
300,522	-		LRK53_RS01215	0.73	-1.0
300,522	-		LRK53_RS01215	0.73	+0.0
300,522	-		LRK53_RS01215	0.73	-0.5
300,522	-		LRK53_RS01215	0.73	-2.3
300,586	+				-1.2
300,587	-				-1.4
300,587	-				-0.5
300,587	-				+0.6
300,659	+		LRK53_RS01220	0.11	-1.1
300,660	-		LRK53_RS01220	0.11	-1.5
300,660	-		LRK53_RS01220	0.11	-0.8
300,700	-		LRK53_RS01220	0.25	-0.5
300,788	+		LRK53_RS01220	0.56	+0.6
300,789	-		LRK53_RS01220	0.56	-1.5
300,789	-		LRK53_RS01220	0.56	+1.0
300,789	-		LRK53_RS01220	0.56	-0.3
300,791	+		LRK53_RS01220	0.57	-0.5
300,791	+		LRK53_RS01220	0.57	-1.0
300,792	-		LRK53_RS01220	0.57	-1.3
300,792	-		LRK53_RS01220	0.57	-1.3
300,792	-		LRK53_RS01220	0.57	-1.0
300,792	-		LRK53_RS01220	0.57	+0.6
300,863	+		LRK53_RS01220	0.82	+1.0
300,863	+		LRK53_RS01220	0.82	-2.0
300,863	+		LRK53_RS01220	0.82	-0.5
300,863	+		LRK53_RS01220	0.82	+1.0
300,863	+		LRK53_RS01220	0.82	+0.2
300,863	+		LRK53_RS01220	0.82	+0.5
300,863	+		LRK53_RS01220	0.82	+1.0
300,863	+		LRK53_RS01220	0.82	-0.8
300,863	+		LRK53_RS01220	0.82	-1.2
300,863	+		LRK53_RS01220	0.82	-1.6
300,864	-		LRK53_RS01220	0.82	-1.3
300,864	-		LRK53_RS01220	0.82	-0.7
300,864	-		LRK53_RS01220	0.82	-0.5
300,864	-		LRK53_RS01220	0.82	-1.5
300,864	-		LRK53_RS01220	0.82	-0.5
300,864	-		LRK53_RS01220	0.82	+1.0
300,864	-		LRK53_RS01220	0.82	-0.3
300,864	-		LRK53_RS01220	0.82	+0.5
300,864	-		LRK53_RS01220	0.82	-1.0
300,864	-		LRK53_RS01220	0.82	-1.0
300,864	-		LRK53_RS01220	0.82	-1.3
300,864	-		LRK53_RS01220	0.82	+2.0
300,864	-		LRK53_RS01220	0.82	-1.3
300,864	-		LRK53_RS01220	0.82	-1.1
300,864	-		LRK53_RS01220	0.82	-1.3
300,905	+				-0.5
300,905	+				-1.8
300,906	-				+1.0
300,906	-				-1.3
300,906	-				-0.3
300,906	-				-0.7
300,938	+				-0.7
300,938	+				-2.1
300,938	+				-0.5
300,938	+				-1.1
300,938	+				-2.0
300,938	+				-0.3
300,938	+				-1.3
300,939	-				+0.0
300,939	-				-0.5
300,939	-				-1.4
300,939	-				-0.5
300,939	-				+0.0
300,939	-				-0.8
300,939	-				-0.7
300,971	+				-2.1
300,972	-				+1.3
300,972	-				-3.0
300,972	-				-2.3
300,989	-				+0.6
300,989	-				+1.5
300,989	-				+0.0
300,989	-				-0.1
300,989	-				-1.3
301,013	+				-1.3
301,015	+				+0.0
301,015	+				+0.1
301,015	+				+0.0
301,015	+				+0.0
301,015	+				-0.8
301,015	+				+0.0
301,015	+				-0.5
301,015	+				-0.5
301,015	+				-1.8
301,015	+				+0.0
301,015	+				-1.8
301,015	+				-1.8
301,016	-				-1.0
301,016	-				+1.0
301,016	-				+1.0
301,016	-				-1.1
301,016	-				-0.5
301,016	-				-1.3
301,016	-				-0.7
301,016	-				-0.1
301,016	-				+0.0
301,016	-				+0.3
301,016	-				-1.3
301,016	-				+0.0
301,016	-				-0.8
301,016	-				-1.3
301,016	-				-0.5
301,016	-				-0.5
301,025	+				+1.0
301,025	+				-0.4
301,025	+				+1.0
301,025	+				+1.0
301,025	+				-1.6
301,025	+				+0.0
301,025	+				+0.3
301,025	+				-1.3
301,025	+				-0.8
301,026	-				-0.5
301,026	-				-1.4
301,026	-				-1.8
301,026	-				-0.5
301,026	-				-1.0
301,026	-				-1.6
301,026	-				-1.7
301,026	-				-0.5
301,026	-				-1.3
301,026	-				-0.5
301,058	+		LRK53_RS01225	0.11	-0.3
301,058	+		LRK53_RS01225	0.11	-2.3
301,058	+		LRK53_RS01225	0.11	+0.0
301,058	+		LRK53_RS01225	0.11	+0.0
301,059	-		LRK53_RS01225	0.11	+0.0
301,059	-		LRK53_RS01225	0.11	-1.1
301,059	-		LRK53_RS01225	0.11	-0.5
301,126	+		LRK53_RS01225	0.19	+0.8
301,126	+		LRK53_RS01225	0.19	-0.7
301,149	+		LRK53_RS01225	0.22	-1.8
301,150	-		LRK53_RS01225	0.22	-0.7
301,150	-		LRK53_RS01225	0.22	-0.5
301,150	-		LRK53_RS01225	0.22	+0.3
301,150	-		LRK53_RS01225	0.22	+1.0
301,229	-		LRK53_RS01225	0.31	-1.8
301,244	-		LRK53_RS01225	0.33	-0.4
301,244	-		LRK53_RS01225	0.33	+1.0
301,244	-		LRK53_RS01225	0.33	-0.7
301,244	-		LRK53_RS01225	0.33	-0.0
301,258	+		LRK53_RS01225	0.35	+0.0
301,259	-		LRK53_RS01225	0.35	-0.1
301,259	-		LRK53_RS01225	0.35	-0.5
301,356	-		LRK53_RS01225	0.46	+0.5
301,379	+		LRK53_RS01225	0.49	-0.5
301,379	+		LRK53_RS01225	0.49	-1.0
301,379	+		LRK53_RS01225	0.49	-1.8
301,379	+		LRK53_RS01225	0.49	-0.5
301,379	+		LRK53_RS01225	0.49	-1.8
301,379	+		LRK53_RS01225	0.49	+1.0
301,379	+		LRK53_RS01225	0.49	+0.0
301,379	+		LRK53_RS01225	0.49	-0.5
301,379	+		LRK53_RS01225	0.49	-1.0
301,379	+		LRK53_RS01225	0.49	-0.5
301,380	-		LRK53_RS01225	0.49	-0.5
301,380	-		LRK53_RS01225	0.49	-0.5
301,380	-		LRK53_RS01225	0.49	+0.0
301,380	-		LRK53_RS01225	0.49	+0.0
301,380	-		LRK53_RS01225	0.49	-1.4
301,380	-		LRK53_RS01225	0.49	-1.1
301,380	-		LRK53_RS01225	0.49	-1.3
301,380	-		LRK53_RS01225	0.49	+1.0
301,380	-		LRK53_RS01225	0.49	-0.5
301,380	-		LRK53_RS01225	0.49	-1.5
301,380	-		LRK53_RS01225	0.49	+0.0
301,444	+		LRK53_RS01225	0.57	+1.0
301,445	-		LRK53_RS01225	0.57	+0.0
301,445	-		LRK53_RS01225	0.57	-1.0
301,445	-		LRK53_RS01225	0.57	+0.6
301,445	-		LRK53_RS01225	0.57	-0.8
301,445	-		LRK53_RS01225	0.57	-0.7
301,445	-		LRK53_RS01225	0.57	-0.5
301,447	+		LRK53_RS01225	0.57	-0.7
301,447	+		LRK53_RS01225	0.57	-1.4
301,447	+		LRK53_RS01225	0.57	-1.4
301,447	+		LRK53_RS01225	0.57	-0.5
301,447	+		LRK53_RS01225	0.57	-2.4
301,447	+		LRK53_RS01225	0.57	-1.8
301,447	+		LRK53_RS01225	0.57	-1.0
301,447	+		LRK53_RS01225	0.57	-2.0
301,447	+		LRK53_RS01225	0.57	-1.0
301,447	+		LRK53_RS01225	0.57	-1.0
301,448	-		LRK53_RS01225	0.58	+0.2
301,448	-		LRK53_RS01225	0.58	-2.5
301,448	-		LRK53_RS01225	0.58	+1.0
301,448	-		LRK53_RS01225	0.58	+0.0
301,448	-		LRK53_RS01225	0.58	-1.0
301,579	+		LRK53_RS01225	0.73	-1.0
301,579	+		LRK53_RS01225	0.73	+1.0
301,579	+		LRK53_RS01225	0.73	+0.0
301,579	+		LRK53_RS01225	0.73	-0.9
301,579	+		LRK53_RS01225	0.73	-2.0
301,579	+		LRK53_RS01225	0.73	-0.5
301,579	+		LRK53_RS01225	0.73	+0.0
301,579	+		LRK53_RS01225	0.73	-2.3
301,579	+		LRK53_RS01225	0.73	+0.0
301,579	+		LRK53_RS01225	0.73	-1.2
301,579	+		LRK53_RS01225	0.73	-0.2
301,579	+		LRK53_RS01225	0.73	-0.5
301,579	+		LRK53_RS01225	0.73	-1.3
301,579	+		LRK53_RS01225	0.73	-1.5
301,579	+		LRK53_RS01225	0.73	+0.6
301,579	+		LRK53_RS01225	0.73	-1.3
301,579	+		LRK53_RS01225	0.73	+0.6
301,579	+		LRK53_RS01225	0.73	+1.4
301,579	+		LRK53_RS01225	0.73	-0.4
301,579	+		LRK53_RS01225	0.73	-1.0
301,579	+		LRK53_RS01225	0.73	-0.5
301,580	-		LRK53_RS01225	0.73	-1.8
301,580	-		LRK53_RS01225	0.73	+0.0
301,580	-		LRK53_RS01225	0.73	-0.5
301,580	-		LRK53_RS01225	0.73	+0.0
301,580	-		LRK53_RS01225	0.73	-0.3
301,580	-		LRK53_RS01225	0.73	+0.0
301,580	-		LRK53_RS01225	0.73	-1.5
301,580	-		LRK53_RS01225	0.73	-0.1
301,580	-		LRK53_RS01225	0.73	+0.0
301,580	-		LRK53_RS01225	0.73	+0.0
301,580	-		LRK53_RS01225	0.73	+0.8
301,580	-		LRK53_RS01225	0.73	-0.5
301,580	-		LRK53_RS01225	0.73	-2.1
301,580	-		LRK53_RS01225	0.73	-0.7
301,616	+		LRK53_RS01225	0.78	-1.3
301,616	+		LRK53_RS01225	0.78	-1.0
301,616	+		LRK53_RS01225	0.78	-1.0
301,616	+		LRK53_RS01225	0.78	-1.2
301,617	-		LRK53_RS01225	0.78	-1.3
301,617	-		LRK53_RS01225	0.78	-0.6
301,617	-		LRK53_RS01225	0.78	-0.3
301,617	-		LRK53_RS01225	0.78	-2.0