Strain Fitness in Escherichia coli ECRC98 around JDDGAC_06315

Experiment: WM_Bas69

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Bas69
1,102,705	-				-1.5
1,102,937	-		JDDGAC_06310	0.41	-1.8
1,102,939	-		JDDGAC_06310	0.42	-1.4
1,102,939	-		JDDGAC_06310	0.42	-0.2
1,103,393	+				+0.5
1,103,394	-				-0.4
1,103,403	-				+0.8
1,103,453	-				+1.1
1,103,455	+				+2.1
1,103,456	-				-3.5
1,103,456	-				+2.1
1,103,456	-				+0.3
1,103,456	-				-1.4
1,103,464	-				+0.2
1,103,499	-				+1.4
1,103,667	+	hipB	JDDGAC_06315	0.28	-0.7
1,103,668	-	hipB	JDDGAC_06315	0.28	-0.9
1,103,708	+	hipB	JDDGAC_06315	0.35	-0.4
1,103,709	-	hipB	JDDGAC_06315	0.35	-1.4
1,103,836	-	hipB	JDDGAC_06315	0.57	-0.0
1,103,913	-	hipB	JDDGAC_06315	0.70	-1.0
1,103,917	-	hipB	JDDGAC_06315	0.71	-0.8
1,103,917	-	hipB	JDDGAC_06315	0.71	-1.2
1,104,115	-				-1.1
1,104,123	-				+0.7
1,104,178	-				+0.8
1,104,185	-				+1.7
1,104,221	-				-2.6
1,104,280	-				+0.1
1,104,354	+				+1.2
1,104,607	+				+2.8
1,104,659	-				+0.8
1,104,665	+				-2.1
1,104,679	+				-0.5
1,104,679	+				+1.7
1,104,692	+	ompT	JDDGAC_06320	0.11	-0.8
1,104,812	+	ompT	JDDGAC_06320	0.24	-0.4
1,104,835	+	ompT	JDDGAC_06320	0.26	+0.9
1,104,835	+	ompT	JDDGAC_06320	0.26	+1.6
1,104,884	+	ompT	JDDGAC_06320	0.31	-1.8
1,104,990	-	ompT	JDDGAC_06320	0.42	-0.9
1,105,020	+	ompT	JDDGAC_06320	0.46	-1.8
1,105,086	+	ompT	JDDGAC_06320	0.53	+0.4