Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15840

Experiment: R2A_PIPES with Nickel (II) chloride 848 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Nickel (II) chloride 848 uM
3,461,529	+		LRK53_RS15830	0.81	+1.0
3,461,530	-		LRK53_RS15830	0.81	-0.6
3,461,541	+		LRK53_RS15830	0.82	-1.3
3,461,541	+		LRK53_RS15830	0.82	-1.2
3,461,541	+		LRK53_RS15830	0.82	-1.3
3,461,541	+		LRK53_RS15830	0.82	+0.0
3,461,541	+		LRK53_RS15830	0.82	-0.2
3,461,541	+		LRK53_RS15830	0.82	-1.0
3,461,541	+		LRK53_RS15830	0.82	+0.4
3,461,541	+		LRK53_RS15830	0.82	+1.0
3,461,541	+		LRK53_RS15830	0.82	+0.0
3,461,541	+		LRK53_RS15830	0.82	+1.0
3,461,541	+		LRK53_RS15830	0.82	-1.3
3,461,541	+		LRK53_RS15830	0.82	-0.6
3,461,541	+		LRK53_RS15830	0.82	+0.0
3,461,541	+		LRK53_RS15830	0.82	+0.0
3,461,542	-		LRK53_RS15830	0.82	+1.0
3,461,542	-		LRK53_RS15830	0.82	+0.0
3,461,542	-		LRK53_RS15830	0.82	-1.0
3,461,542	-		LRK53_RS15830	0.82	-0.2
3,461,542	-		LRK53_RS15830	0.82	+1.0
3,461,619	+		LRK53_RS15830	0.86	-1.6
3,461,619	+		LRK53_RS15830	0.86	+0.4
3,461,619	+		LRK53_RS15830	0.86	+0.8
3,461,619	+		LRK53_RS15830	0.86	+0.3
3,461,619	+		LRK53_RS15830	0.86	-0.7
3,461,619	+		LRK53_RS15830	0.86	+0.3
3,461,619	+		LRK53_RS15830	0.86	-0.3
3,461,619	+		LRK53_RS15830	0.86	+0.0
3,461,620	-		LRK53_RS15830	0.86	-0.8
3,461,620	-		LRK53_RS15830	0.86	+1.0
3,461,620	-		LRK53_RS15830	0.86	+0.0
3,461,620	-		LRK53_RS15830	0.86	+1.0
3,461,694	+		LRK53_RS15830	0.90	-0.3
3,461,694	+		LRK53_RS15830	0.90	+1.0
3,461,694	+		LRK53_RS15830	0.90	-0.8
3,461,694	+		LRK53_RS15830	0.90	+0.0
3,461,694	+		LRK53_RS15830	0.90	+0.0
3,461,695	-		LRK53_RS15830	0.90	-2.3
3,461,695	-		LRK53_RS15830	0.90	+2.6
3,461,695	-		LRK53_RS15830	0.90	-0.6
3,461,695	-		LRK53_RS15830	0.90	-0.4
3,461,695	-		LRK53_RS15830	0.90	-1.1
3,461,695	-		LRK53_RS15830	0.90	-0.6
3,461,695	-		LRK53_RS15830	0.90	+1.0
3,461,695	-		LRK53_RS15830	0.90	-0.6
3,461,700	+				+1.0
3,461,700	+				-0.6
3,461,700	+				-1.7
3,461,700	+				+0.4
3,461,700	+				-1.3
3,461,700	+				+0.0
3,461,700	+				-2.1
3,461,700	+				-0.6
3,461,700	+				+0.7
3,461,700	+				+0.0
3,461,700	+				-0.6
3,461,700	+				-0.6
3,461,700	+				+0.0
3,461,700	+				+0.0
3,461,700	+				+0.4
3,461,700	+				-1.4
3,461,700	+				+0.9
3,461,701	-				-1.5
3,461,701	-				-0.4
3,461,701	-				-0.2
3,461,701	-				-0.8
3,461,701	-				+0.0
3,461,701	-				-0.3
3,461,701	-				+1.0
3,461,701	-				-1.3
3,461,701	-				+0.2
3,461,701	-				-0.4
3,461,701	-				-0.2
3,461,701	-				+0.3
3,461,701	-				-1.0
3,461,701	-				-0.6
3,461,701	-				+0.7
3,461,899	+				+0.6
3,461,899	+				+1.4
3,461,899	+				-0.2
3,461,899	+				-1.6
3,461,900	-				-0.6
3,461,900	-				-1.3
3,461,900	-				-1.1
3,461,900	-				+1.0
3,461,900	-				-2.6
3,462,321	+		LRK53_RS15835	0.69	-0.5
3,462,321	+		LRK53_RS15835	0.69	-0.3
3,462,321	+		LRK53_RS15835	0.69	+0.0
3,462,321	+		LRK53_RS15835	0.69	+0.0
3,462,321	+		LRK53_RS15835	0.69	+0.0
3,462,321	+		LRK53_RS15835	0.69	-1.1
3,462,321	+		LRK53_RS15835	0.69	+1.0
3,462,321	+		LRK53_RS15835	0.69	-1.7
3,462,321	+		LRK53_RS15835	0.69	-0.6
3,462,322	-		LRK53_RS15835	0.69	-0.3
3,462,322	-		LRK53_RS15835	0.69	-1.0
3,462,322	-		LRK53_RS15835	0.69	-0.1
3,462,342	+		LRK53_RS15835	0.75	+0.2
3,462,342	+		LRK53_RS15835	0.75	+0.0
3,462,342	+		LRK53_RS15835	0.75	+1.0
3,462,342	+		LRK53_RS15835	0.75	+0.0
3,462,342	+		LRK53_RS15835	0.75	+1.0
3,462,342	+		LRK53_RS15835	0.75	+0.6
3,462,342	+		LRK53_RS15835	0.75	+2.0
3,462,342	+		LRK53_RS15835	0.75	+1.0
3,462,342	+		LRK53_RS15835	0.75	-0.3
3,462,342	+		LRK53_RS15835	0.75	-1.1
3,462,343	-		LRK53_RS15835	0.75	+1.4
3,462,343	-		LRK53_RS15835	0.75	-1.1
3,462,343	-		LRK53_RS15835	0.75	-0.6
3,462,343	-		LRK53_RS15835	0.75	-1.0
3,462,343	-		LRK53_RS15835	0.75	-1.3
3,462,343	-		LRK53_RS15835	0.75	-0.1
3,462,372	+		LRK53_RS15835	0.82	-1.6
3,462,372	+		LRK53_RS15835	0.82	-1.3
3,462,481	+				+0.4
3,462,482	-				-0.5
3,462,760	+		LRK53_RS15840	0.54	-1.0
3,462,760	+		LRK53_RS15840	0.54	+0.0
3,462,760	+		LRK53_RS15840	0.54	-0.8
3,462,760	+		LRK53_RS15840	0.54	+1.8
3,462,760	+		LRK53_RS15840	0.54	+2.0
3,462,760	+		LRK53_RS15840	0.54	-1.6
3,462,760	+		LRK53_RS15840	0.54	+0.6
3,462,760	+		LRK53_RS15840	0.54	+0.4
3,462,760	+		LRK53_RS15840	0.54	-1.0
3,462,760	+		LRK53_RS15840	0.54	+0.0
3,462,760	+		LRK53_RS15840	0.54	-0.9
3,462,760	+		LRK53_RS15840	0.54	-0.6
3,462,761	-		LRK53_RS15840	0.54	-0.3
3,462,761	-		LRK53_RS15840	0.54	-2.9
3,462,761	-		LRK53_RS15840	0.54	+0.3
3,462,761	-		LRK53_RS15840	0.54	-1.3
3,462,761	-		LRK53_RS15840	0.54	-1.0
3,462,761	-		LRK53_RS15840	0.54	+0.6
3,462,761	-		LRK53_RS15840	0.54	-1.3
3,462,761	-		LRK53_RS15840	0.54	-0.6
3,462,761	-		LRK53_RS15840	0.54	+1.4
3,462,761	-		LRK53_RS15840	0.54	+0.4
3,462,761	-		LRK53_RS15840	0.54	-0.6
3,462,761	-		LRK53_RS15840	0.54	-0.3
3,462,761	-		LRK53_RS15840	0.54	+2.6
3,462,761	-		LRK53_RS15840	0.54	+0.6
3,462,761	-		LRK53_RS15840	0.54	+0.0
3,462,761	-		LRK53_RS15840	0.54	+0.0
3,462,994	+				-0.5
3,462,994	+				-0.7
3,462,994	+				-0.6
3,462,994	+				-1.3
3,462,995	-				+0.6
3,462,995	-				-0.2
3,462,995	-				+0.4
3,462,995	-				+0.4
3,462,995	-				+1.4
3,463,019	+				-1.0
3,463,020	-				-0.1
3,463,020	-				-0.6
3,463,470	+		LRK53_RS15845	0.20	+2.0
3,463,471	-		LRK53_RS15845	0.20	-0.2
3,463,471	-		LRK53_RS15845	0.20	-1.8
3,463,629	+		LRK53_RS15845	0.27	+1.0
3,463,629	+		LRK53_RS15845	0.27	-0.6
3,463,629	+		LRK53_RS15845	0.27	-0.2
3,463,629	+		LRK53_RS15845	0.27	-1.6
3,463,629	+		LRK53_RS15845	0.27	-0.7
3,463,629	+		LRK53_RS15845	0.27	-0.6
3,463,630	-		LRK53_RS15845	0.27	-0.1
3,463,630	-		LRK53_RS15845	0.27	+0.0
3,463,630	-		LRK53_RS15845	0.27	+0.4
3,463,630	-		LRK53_RS15845	0.27	+1.0
3,463,630	-		LRK53_RS15845	0.27	-0.2
3,463,630	-		LRK53_RS15845	0.27	-0.6
3,463,630	-		LRK53_RS15845	0.27	-0.6
3,463,630	-		LRK53_RS15845	0.27	-1.6
3,463,630	-		LRK53_RS15845	0.27	-1.8
3,463,630	-		LRK53_RS15845	0.27	-0.5
3,463,630	-		LRK53_RS15845	0.27	-0.7
3,463,635	+		LRK53_RS15845	0.27	+0.4
3,463,635	+		LRK53_RS15845	0.27	-2.1
3,463,635	+		LRK53_RS15845	0.27	-1.6
3,463,635	+		LRK53_RS15845	0.27	-0.1
3,463,635	+		LRK53_RS15845	0.27	-0.2
3,463,636	-		LRK53_RS15845	0.27	-1.0
3,463,636	-		LRK53_RS15845	0.27	-0.6
3,463,636	-		LRK53_RS15845	0.27	+0.4
3,463,636	-		LRK53_RS15845	0.27	-0.6
3,463,636	-		LRK53_RS15845	0.27	+0.0
3,463,636	-		LRK53_RS15845	0.27	+0.0
3,463,857	+		LRK53_RS15845	0.36	+0.2
3,463,857	+		LRK53_RS15845	0.36	-1.0
3,463,858	-		LRK53_RS15845	0.36	-0.3
3,463,858	-		LRK53_RS15845	0.36	-0.8
3,463,947	+		LRK53_RS15845	0.40	-0.6
3,463,947	+		LRK53_RS15845	0.40	-2.4
3,463,947	+		LRK53_RS15845	0.40	-0.1
3,463,948	-		LRK53_RS15845	0.40	+1.0
3,463,948	-		LRK53_RS15845	0.40	-2.0