Strain Fitness in Escherichia coli ECRC98 around JDDGAC_09550

Experiment: WM_Bas69

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Bas69
1,693,873	-				-0.8
1,694,024	+	artM	JDDGAC_09535	0.22	-0.0
1,694,026	+	artM	JDDGAC_09535	0.23	+0.6
1,694,027	-	artM	JDDGAC_09535	0.23	+2.4
1,694,027	-	artM	JDDGAC_09535	0.23	-2.5
1,694,148	+	artM	JDDGAC_09535	0.41	-1.6
1,694,188	+	artM	JDDGAC_09535	0.47	+2.6
1,694,188	+	artM	JDDGAC_09535	0.47	+0.3
1,694,275	+	artM	JDDGAC_09535	0.60	-2.7
1,694,356	+	artM	JDDGAC_09535	0.72	-3.7
1,694,370	-	artM	JDDGAC_09535	0.74	+0.2
1,694,370	-	artM	JDDGAC_09535	0.74	-0.5
1,694,426	+	artM	JDDGAC_09535	0.83	+0.7
1,694,427	-	artM	JDDGAC_09535	0.83	+0.6
1,694,462	+	artM	JDDGAC_09535	0.88	+0.2
1,694,541	-				-0.0
1,694,582	+		JDDGAC_09540	0.29	+0.7
1,694,924	-	artJ	JDDGAC_09550	0.12	-1.8
1,694,953	-	artJ	JDDGAC_09550	0.16	+3.7
1,694,981	+	artJ	JDDGAC_09550	0.20	-1.8
1,695,073	+	artJ	JDDGAC_09550	0.33	-0.4
1,695,084	-	artJ	JDDGAC_09550	0.34	-1.4
1,695,114	+	artJ	JDDGAC_09550	0.38	-0.5
1,695,115	-	artJ	JDDGAC_09550	0.39	+0.2
1,695,185	-	artJ	JDDGAC_09550	0.48	+1.1
1,695,185	-	artJ	JDDGAC_09550	0.48	-1.8
1,695,234	+	artJ	JDDGAC_09550	0.55	-0.6
1,695,237	+	artJ	JDDGAC_09550	0.55	-1.5
1,695,253	-	artJ	JDDGAC_09550	0.57	-2.2
1,695,289	+	artJ	JDDGAC_09550	0.62	-0.3
1,695,299	-	artJ	JDDGAC_09550	0.64	-1.2
1,695,333	+	artJ	JDDGAC_09550	0.68	-1.7
1,695,459	-	artJ	JDDGAC_09550	0.86	-1.6
1,695,513	+				+1.5
1,695,513	+				-1.5
1,695,525	+				-1.6
1,695,525	+				+0.7
1,695,525	+				-0.3
1,695,529	+				-1.0
1,695,529	+				+0.2
1,695,529	+				+0.3
1,695,529	+				+2.0
1,695,530	-				-1.5
1,695,562	+				+0.4
1,695,563	-				-0.3
1,695,787	+	aslA	JDDGAC_09555	0.12	-2.0
1,695,810	+	aslA	JDDGAC_09555	0.13	-0.7
1,695,810	+	aslA	JDDGAC_09555	0.13	+0.8
1,695,811	-	aslA	JDDGAC_09555	0.13	-1.3
1,695,814	-	aslA	JDDGAC_09555	0.13	-0.6
1,695,855	+	aslA	JDDGAC_09555	0.16	+4.1
1,695,913	+	aslA	JDDGAC_09555	0.20	+1.4
1,695,914	-	aslA	JDDGAC_09555	0.20	+0.1
1,695,956	+	aslA	JDDGAC_09555	0.23	-1.1
1,695,957	-	aslA	JDDGAC_09555	0.23	-0.4
1,695,958	+	aslA	JDDGAC_09555	0.23	+1.5
1,695,958	+	aslA	JDDGAC_09555	0.23	+0.9
1,695,959	-	aslA	JDDGAC_09555	0.23	+0.4
1,695,959	-	aslA	JDDGAC_09555	0.23	-1.4
1,695,959	-	aslA	JDDGAC_09555	0.23	-1.8
1,695,959	-	aslA	JDDGAC_09555	0.23	+0.8
1,695,959	-	aslA	JDDGAC_09555	0.23	-1.6
1,695,959	-	aslA	JDDGAC_09555	0.23	+1.0
1,695,959	-	aslA	JDDGAC_09555	0.23	-1.2
1,695,964	+	aslA	JDDGAC_09555	0.24	-3.3
1,695,964	+	aslA	JDDGAC_09555	0.24	-1.9
1,695,979	-	aslA	JDDGAC_09555	0.25	-0.3
1,695,983	+	aslA	JDDGAC_09555	0.25	-0.6
1,696,102	+	aslA	JDDGAC_09555	0.33	+0.4
1,696,159	-	aslA	JDDGAC_09555	0.37	+0.1
1,696,193	+	aslA	JDDGAC_09555	0.39	+1.2
1,696,211	-	aslA	JDDGAC_09555	0.40	+0.4
1,696,213	+	aslA	JDDGAC_09555	0.40	-0.2
1,696,289	+	aslA	JDDGAC_09555	0.45	-1.1
1,696,290	-	aslA	JDDGAC_09555	0.46	-0.2
1,696,290	-	aslA	JDDGAC_09555	0.46	-3.6
1,696,433	-	aslA	JDDGAC_09555	0.55	+2.0
1,696,433	-	aslA	JDDGAC_09555	0.55	-0.2
1,696,472	-	aslA	JDDGAC_09555	0.58	-0.4
1,696,472	-	aslA	JDDGAC_09555	0.58	-0.1
1,696,524	+	aslA	JDDGAC_09555	0.61	-2.1
1,696,557	-	aslA	JDDGAC_09555	0.64	+1.3