Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17465

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 5 mM
3,832,706	+				-0.0
3,832,706	+				-0.9
3,832,706	+				-0.0
3,832,706	+				-1.3
3,832,707	-				-1.0
3,832,707	-				+0.6
3,832,707	-				+1.0
3,832,707	-				-0.6
3,832,757	+				+1.0
3,832,758	-				-2.0
3,832,758	-				+1.6
3,832,758	-				+1.6
3,832,758	-				-0.0
3,832,876	+		LRK53_RS17460	0.14	-1.6
3,832,876	+		LRK53_RS17460	0.14	-1.0
3,832,877	-		LRK53_RS17460	0.14	+1.0
3,832,877	-		LRK53_RS17460	0.14	+1.0
3,833,183	-		LRK53_RS17460	0.53	-0.0
3,833,183	-		LRK53_RS17460	0.53	-1.1
3,833,317	+		LRK53_RS17460	0.70	-0.0
3,833,318	-		LRK53_RS17460	0.70	-0.2
3,833,494	+				+1.0
3,833,494	+				-1.8
3,833,495	-				-0.0
3,833,495	-				-0.9
3,833,495	-				-2.1
3,833,559	+				+2.0
3,833,560	-				-3.9
3,833,560	-				-1.1
3,833,616	+		LRK53_RS17465	0.13	-1.0
3,833,616	+		LRK53_RS17465	0.13	+0.3
3,833,616	+		LRK53_RS17465	0.13	-0.0
3,833,616	+		LRK53_RS17465	0.13	-0.0
3,833,616	+		LRK53_RS17465	0.13	-0.0
3,833,616	+		LRK53_RS17465	0.13	-0.6
3,833,617	-		LRK53_RS17465	0.14	+0.4
3,833,617	-		LRK53_RS17465	0.14	+1.0
3,833,617	-		LRK53_RS17465	0.14	-0.0
3,833,731	-		LRK53_RS17465	0.40	-1.0
3,833,731	-		LRK53_RS17465	0.40	-0.0
3,833,731	-		LRK53_RS17465	0.40	-0.0
3,833,731	-		LRK53_RS17465	0.40	-0.6
3,833,739	+		LRK53_RS17465	0.42	+1.0
3,833,739	+		LRK53_RS17465	0.42	-0.0
3,833,739	+		LRK53_RS17465	0.42	-0.0
3,833,739	+		LRK53_RS17465	0.42	-1.0
3,833,739	+		LRK53_RS17465	0.42	-2.4
3,833,739	+		LRK53_RS17465	0.42	-0.6
3,833,739	+		LRK53_RS17465	0.42	-0.6
3,833,740	-		LRK53_RS17465	0.42	-1.2
3,833,740	-		LRK53_RS17465	0.42	+1.0
3,833,740	-		LRK53_RS17465	0.42	+1.2
3,833,740	-		LRK53_RS17465	0.42	+1.4
3,833,740	-		LRK53_RS17465	0.42	-0.4
3,833,937	+		LRK53_RS17465	0.87	-1.0
3,833,937	+		LRK53_RS17465	0.87	-2.8
3,833,937	+		LRK53_RS17465	0.87	-0.0
3,833,937	+		LRK53_RS17465	0.87	-1.6
3,833,937	+		LRK53_RS17465	0.87	+0.4
3,833,937	+		LRK53_RS17465	0.87	+0.3
3,833,937	+		LRK53_RS17465	0.87	+0.3
3,833,937	+		LRK53_RS17465	0.87	-0.0
3,833,938	-		LRK53_RS17465	0.87	-1.3
3,833,938	-		LRK53_RS17465	0.87	-1.6
3,833,962	+				-1.0
3,833,962	+				-1.6
3,833,962	+				+0.3
3,833,963	-				-1.7
3,833,963	-				-1.3
3,833,963	-				+0.4
3,833,983	+				-0.6
3,833,984	-				-1.4
3,833,984	-				-0.9
3,833,984	-				-0.6
3,834,289	+		LRK53_RS17470	0.36	+0.1
3,834,289	+		LRK53_RS17470	0.36	+1.0
3,834,290	-		LRK53_RS17470	0.37	-1.8
3,834,290	-		LRK53_RS17470	0.37	-0.6
3,834,421	+		LRK53_RS17470	0.57	-0.6
3,834,421	+		LRK53_RS17470	0.57	-1.6
3,834,421	+		LRK53_RS17470	0.57	-1.3
3,834,422	-		LRK53_RS17470	0.57	+1.6
3,834,422	-		LRK53_RS17470	0.57	-0.0
3,834,539	+		LRK53_RS17470	0.75	-0.6
3,834,539	+		LRK53_RS17470	0.75	-0.3
3,834,539	+		LRK53_RS17470	0.75	-0.6
3,834,539	+		LRK53_RS17470	0.75	-1.0
3,834,539	+		LRK53_RS17470	0.75	-0.4
3,834,539	+		LRK53_RS17470	0.75	-1.6
3,834,539	+		LRK53_RS17470	0.75	+0.5
3,834,539	+		LRK53_RS17470	0.75	-2.7
3,834,539	+		LRK53_RS17470	0.75	-1.8
3,834,539	+		LRK53_RS17470	0.75	-1.0
3,834,539	+		LRK53_RS17470	0.75	-0.2
3,834,539	+		LRK53_RS17470	0.75	+0.3
3,834,539	+		LRK53_RS17470	0.75	+0.3
3,834,539	+		LRK53_RS17470	0.75	-0.3
3,834,539	+		LRK53_RS17470	0.75	-1.6
3,834,539	+		LRK53_RS17470	0.75	-0.3
3,834,539	+		LRK53_RS17470	0.75	-2.2
3,834,539	+		LRK53_RS17470	0.75	-0.1
3,834,539	+		LRK53_RS17470	0.75	-1.3
3,834,539	+		LRK53_RS17470	0.75	-1.8
3,834,539	+		LRK53_RS17470	0.75	-1.3
3,834,539	+		LRK53_RS17470	0.75	-0.4
3,834,539	+		LRK53_RS17470	0.75	-1.5
3,834,539	+		LRK53_RS17470	0.75	-1.3
3,834,540	-		LRK53_RS17470	0.75	-0.0
3,834,540	-		LRK53_RS17470	0.75	-0.6
3,834,540	-		LRK53_RS17470	0.75	-1.0
3,834,540	-		LRK53_RS17470	0.75	-0.0
3,834,540	-		LRK53_RS17470	0.75	-1.3
3,834,540	-		LRK53_RS17470	0.75	+1.3
3,834,540	-		LRK53_RS17470	0.75	+0.2
3,834,540	-		LRK53_RS17470	0.75	-0.6
3,834,540	-		LRK53_RS17470	0.75	-1.0
3,834,540	-		LRK53_RS17470	0.75	+0.6
3,834,540	-		LRK53_RS17470	0.75	-1.6
3,834,540	-		LRK53_RS17470	0.75	-1.0
3,834,540	-		LRK53_RS17470	0.75	-1.6
3,834,540	-		LRK53_RS17470	0.75	+1.0
3,834,540	-		LRK53_RS17470	0.75	-1.8
3,834,540	-		LRK53_RS17470	0.75	-0.6
3,834,540	-		LRK53_RS17470	0.75	-2.6
3,834,540	-		LRK53_RS17470	0.75	-1.0
3,834,540	-		LRK53_RS17470	0.75	-1.1
3,834,540	-		LRK53_RS17470	0.75	-1.2
3,834,540	-		LRK53_RS17470	0.75	+0.1
3,834,540	-		LRK53_RS17470	0.75	+3.0
3,834,540	-		LRK53_RS17470	0.75	+1.0
3,834,693	+				+1.0
3,834,694	-				-0.2