Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16680

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 5 mM
3,669,434	+		LRK53_RS16675	0.82	+0.4
3,669,452	+		LRK53_RS16675	0.83	-1.6
3,669,452	+		LRK53_RS16675	0.83	-1.1
3,669,452	+		LRK53_RS16675	0.83	+0.4
3,669,452	+		LRK53_RS16675	0.83	+0.4
3,669,452	+		LRK53_RS16675	0.83	+1.0
3,669,452	+		LRK53_RS16675	0.83	+0.0
3,669,452	+		LRK53_RS16675	0.83	-2.0
3,669,453	-		LRK53_RS16675	0.84	-0.6
3,669,676	+				-1.8
3,669,676	+				-2.7
3,669,676	+				-0.3
3,669,676	+				-0.6
3,669,676	+				-0.3
3,669,677	-				+0.3
3,669,677	-				-0.3
3,669,738	+		LRK53_RS16680	0.14	+0.0
3,669,738	+		LRK53_RS16680	0.14	+0.7
3,669,738	+		LRK53_RS16680	0.14	-0.6
3,669,738	+		LRK53_RS16680	0.14	+0.0
3,669,738	+		LRK53_RS16680	0.14	+1.0
3,669,738	+		LRK53_RS16680	0.14	+0.0
3,669,738	+		LRK53_RS16680	0.14	+1.0
3,669,738	+		LRK53_RS16680	0.14	+0.0
3,669,738	+		LRK53_RS16680	0.14	-0.8
3,669,738	+		LRK53_RS16680	0.14	-0.6
3,669,738	+		LRK53_RS16680	0.14	+0.6
3,669,738	+		LRK53_RS16680	0.14	-3.0
3,669,739	-		LRK53_RS16680	0.14	+1.6
3,669,739	-		LRK53_RS16680	0.14	-0.8
3,669,739	-		LRK53_RS16680	0.14	-1.3
3,669,739	-		LRK53_RS16680	0.14	-1.8
3,669,739	-		LRK53_RS16680	0.14	-1.6
3,669,739	-		LRK53_RS16680	0.14	-1.6
3,669,742	+		LRK53_RS16680	0.14	+0.4
3,669,742	+		LRK53_RS16680	0.14	-1.3
3,669,742	+		LRK53_RS16680	0.14	-1.6
3,669,742	+		LRK53_RS16680	0.14	-1.3
3,669,742	+		LRK53_RS16680	0.14	-0.7
3,669,742	+		LRK53_RS16680	0.14	-2.6
3,669,742	+		LRK53_RS16680	0.14	+2.0
3,669,742	+		LRK53_RS16680	0.14	-1.9
3,669,743	-		LRK53_RS16680	0.14	-0.6
3,669,743	-		LRK53_RS16680	0.14	-1.3
3,669,743	-		LRK53_RS16680	0.14	+2.6
3,669,743	-		LRK53_RS16680	0.14	-1.4
3,669,743	-		LRK53_RS16680	0.14	-0.3
3,669,743	-		LRK53_RS16680	0.14	+1.0
3,669,743	-		LRK53_RS16680	0.14	-1.3
3,669,743	-		LRK53_RS16680	0.14	+0.0
3,669,889	+		LRK53_RS16680	0.29	-0.6
3,669,889	+		LRK53_RS16680	0.29	-2.0
3,669,889	+		LRK53_RS16680	0.29	-2.0
3,669,889	+		LRK53_RS16680	0.29	+2.3
3,669,889	+		LRK53_RS16680	0.29	-2.0
3,669,889	+		LRK53_RS16680	0.29	+0.5
3,669,889	+		LRK53_RS16680	0.29	+0.0
3,669,889	+		LRK53_RS16680	0.29	-0.3
3,669,889	+		LRK53_RS16680	0.29	-1.0
3,669,889	+		LRK53_RS16680	0.29	-1.0
3,669,889	+		LRK53_RS16680	0.29	-1.3
3,669,890	-		LRK53_RS16680	0.29	-1.2
3,669,890	-		LRK53_RS16680	0.29	-1.0
3,669,890	-		LRK53_RS16680	0.29	-0.6
3,669,890	-		LRK53_RS16680	0.29	+0.0
3,669,890	-		LRK53_RS16680	0.29	-0.6
3,669,890	-		LRK53_RS16680	0.29	-2.3
3,670,592	+				-1.0
3,670,592	+				+2.0
3,670,592	+				-0.4
3,670,592	+				+1.6
3,670,592	+				+0.2
3,670,593	-				+0.3
3,670,593	-				-0.3
3,670,593	-				+0.7
3,670,593	-				+0.2
3,670,593	-				-0.1
3,670,593	-				+1.0
3,670,593	-				-0.7
3,670,593	-				+0.1
3,670,671	+				-0.6
3,670,671	+				+1.0
3,670,671	+				+1.0
3,670,671	+				+0.8
3,670,672	-				-0.3
3,670,672	-				-2.0
3,670,672	-				-0.6
3,670,698	+				-0.4
3,670,698	+				+0.0
3,670,781	+				-0.1
3,670,781	+				+0.5
3,670,781	+				-1.6
3,670,781	+				-0.7
3,670,781	+				-0.6
3,670,781	+				-0.3
3,670,781	+				-1.4
3,670,782	-				-2.2
3,670,782	-				-1.1
3,670,782	-				-1.3
3,670,782	-				+1.0
3,670,782	-				-0.8
3,670,782	-				-2.5
3,670,884	+				+0.3
3,670,934	+				+0.6
3,670,934	+				+1.6
3,670,934	+				+0.3
3,670,934	+				-0.2
3,670,934	+				-0.6
3,670,934	+				-2.3
3,670,934	+				+0.4
3,670,934	+				+1.0
3,670,934	+				+2.0
3,670,934	+				-0.3
3,670,934	+				-1.9
3,670,935	-				-1.0
3,670,935	-				-1.4
3,670,935	-				-0.4
3,670,935	-				-0.8
3,670,935	-				-0.9
3,670,935	-				-1.0
3,670,935	-				-1.0
3,670,935	-				+0.4
3,670,935	-				+1.0
3,671,039	+		LRK53_RS16685	0.12	-1.0
3,671,078	+		LRK53_RS16685	0.14	+1.0
3,671,078	+		LRK53_RS16685	0.14	-1.6
3,671,078	+		LRK53_RS16685	0.14	-1.2
3,671,079	-		LRK53_RS16685	0.14	-1.0
3,671,079	-		LRK53_RS16685	0.14	-1.0
3,671,198	+		LRK53_RS16685	0.19	-1.3
3,671,321	+		LRK53_RS16685	0.25	+0.0
3,671,321	+		LRK53_RS16685	0.25	-1.3
3,671,321	+		LRK53_RS16685	0.25	-0.7
3,671,321	+		LRK53_RS16685	0.25	+0.4
3,671,321	+		LRK53_RS16685	0.25	-0.9
3,671,321	+		LRK53_RS16685	0.25	-0.3
3,671,322	-		LRK53_RS16685	0.25	+0.0
3,671,322	-		LRK53_RS16685	0.25	+2.0
3,671,322	-		LRK53_RS16685	0.25	+0.4
3,671,322	-		LRK53_RS16685	0.25	-0.7
3,671,322	-		LRK53_RS16685	0.25	+0.4
3,671,322	-		LRK53_RS16685	0.25	-1.1
3,671,322	-		LRK53_RS16685	0.25	+2.6