Strain Fitness in Fusobacterium nucleatum SB010 around HUW76_08760

Experiment: G1M1_D7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	G1M1_D7
1,836,325	-				-2.7
1,836,347	+		HUW76_08755	0.11	-1.8
1,836,347	+		HUW76_08755	0.11	-2.3
1,836,355	-		HUW76_08755	0.12	-1.5
1,836,355	-		HUW76_08755	0.12	-3.9
1,836,355	-		HUW76_08755	0.12	-1.8
1,836,355	-		HUW76_08755	0.12	-2.3
1,836,392	+		HUW76_08755	0.15	-1.7
1,836,399	-		HUW76_08755	0.16	-1.6
1,836,399	-		HUW76_08755	0.16	-1.0
1,836,417	+		HUW76_08755	0.17	-3.0
1,836,417	+		HUW76_08755	0.17	-2.7
1,836,467	-		HUW76_08755	0.22	-0.9
1,836,467	-		HUW76_08755	0.22	-0.7
1,836,500	+		HUW76_08755	0.25	-1.7
1,836,500	+		HUW76_08755	0.25	-1.7
1,836,506	+		HUW76_08755	0.26	-3.9
1,836,506	+		HUW76_08755	0.26	-2.9
1,836,601	-		HUW76_08755	0.34	-3.0
1,836,601	-		HUW76_08755	0.34	-4.2
1,836,619	-		HUW76_08755	0.36	+1.6
1,836,619	-		HUW76_08755	0.36	-2.7
1,836,659	+		HUW76_08755	0.40	-4.5
1,836,659	+		HUW76_08755	0.40	-4.1
1,836,659	+		HUW76_08755	0.40	-4.4
1,836,659	+		HUW76_08755	0.40	-3.1
1,836,659	+		HUW76_08755	0.40	-3.8
1,836,667	-		HUW76_08755	0.40	-1.0
1,836,667	-		HUW76_08755	0.40	-2.5
1,836,705	+		HUW76_08755	0.44	-1.9
1,836,705	+		HUW76_08755	0.44	-3.4
1,836,713	+		HUW76_08755	0.45	-3.6
1,836,725	+		HUW76_08755	0.46	-3.0
1,836,725	+		HUW76_08755	0.46	-4.4
1,836,726	+		HUW76_08755	0.46	-3.4
1,836,726	+		HUW76_08755	0.46	-3.1
1,836,733	-		HUW76_08755	0.47	-2.5
1,836,733	-		HUW76_08755	0.47	-1.4
1,836,734	-		HUW76_08755	0.47	-3.1
1,836,734	-		HUW76_08755	0.47	-1.3
1,836,745	+		HUW76_08755	0.48	-3.0
1,836,804	+		HUW76_08755	0.53	-3.3
1,836,804	+		HUW76_08755	0.53	-1.7
1,836,804	+		HUW76_08755	0.53	-4.9
1,836,829	+		HUW76_08755	0.56	-1.5
1,836,865	-		HUW76_08755	0.59	-2.8
1,836,865	-		HUW76_08755	0.59	-3.3
1,836,990	-		HUW76_08755	0.70	-4.6
1,837,001	+		HUW76_08755	0.71	-1.6
1,837,001	+		HUW76_08755	0.71	+0.4
1,837,046	+		HUW76_08755	0.76	-0.6
1,837,046	+		HUW76_08755	0.76	-1.8
1,837,048	+		HUW76_08755	0.76	-4.8
1,837,048	+		HUW76_08755	0.76	-2.1
1,837,048	+		HUW76_08755	0.76	-0.9
1,837,048	+		HUW76_08755	0.76	-3.9
1,837,051	+		HUW76_08755	0.76	-2.1
1,837,054	-		HUW76_08755	0.76	-3.0
1,837,138	+		HUW76_08755	0.84	-1.3
1,837,146	-		HUW76_08755	0.85	-0.9
1,837,146	-		HUW76_08755	0.85	-1.0
1,837,156	-		HUW76_08755	0.86	-5.1
1,837,202	+				-1.0
1,837,244	-				-3.9
1,837,244	-				-4.7
1,837,262	-				-4.8
1,837,263	+				-3.3
1,837,279	-				-2.1
1,837,310	+				-4.4
1,837,363	+				-1.0
1,837,416	+				-2.2
1,837,568	-		HUW76_08760	0.19	-3.6
1,837,583	+		HUW76_08760	0.20	-2.8
1,837,591	-		HUW76_08760	0.21	-3.3
1,837,591	-		HUW76_08760	0.21	-4.6
1,837,689	+		HUW76_08760	0.28	-3.1
1,837,699	-		HUW76_08760	0.29	-1.3
1,837,701	-		HUW76_08760	0.29	-3.2
1,837,704	-		HUW76_08760	0.30	-3.5
1,837,705	-		HUW76_08760	0.30	-1.2
1,837,705	-		HUW76_08760	0.30	-3.4
1,837,711	+		HUW76_08760	0.30	-2.1
1,837,711	+		HUW76_08760	0.30	-2.2
1,837,720	+		HUW76_08760	0.31	-2.9
1,837,720	+		HUW76_08760	0.31	-2.6
1,837,745	+		HUW76_08760	0.33	-2.2
1,837,745	+		HUW76_08760	0.33	-1.6
1,837,843	-		HUW76_08760	0.41	-4.8
1,837,845	+		HUW76_08760	0.41	-4.3
1,837,864	+		HUW76_08760	0.42	-2.2
1,837,864	+		HUW76_08760	0.42	-2.1
1,837,872	-		HUW76_08760	0.43	-3.8
1,837,896	+		HUW76_08760	0.45	-2.9
1,837,896	+		HUW76_08760	0.45	-1.1
1,837,896	+		HUW76_08760	0.45	-2.6
1,837,904	-		HUW76_08760	0.45	+0.4
1,837,904	-		HUW76_08760	0.45	-3.8
1,837,904	-		HUW76_08760	0.45	-5.1
1,837,907	+		HUW76_08760	0.46	-1.4
1,837,915	-		HUW76_08760	0.46	-3.2
1,837,915	-		HUW76_08760	0.46	-3.7
1,837,915	-		HUW76_08760	0.46	-4.2
1,837,917	-		HUW76_08760	0.46	-4.2
1,837,925	-		HUW76_08760	0.47	-4.1
1,837,971	-		HUW76_08760	0.51	-5.2
1,837,971	-		HUW76_08760	0.51	-2.4
1,837,971	-		HUW76_08760	0.51	-1.9
1,838,028	-		HUW76_08760	0.55	-4.7
1,838,028	-		HUW76_08760	0.55	-4.2
1,838,057	-		HUW76_08760	0.57	-3.6
1,838,089	-		HUW76_08760	0.60	-3.3
1,838,089	-		HUW76_08760	0.60	-3.6
1,838,137	+		HUW76_08760	0.64	-1.4
1,838,137	+		HUW76_08760	0.64	-1.7
1,838,137	+		HUW76_08760	0.64	-2.5
1,838,145	-		HUW76_08760	0.64	-3.0
1,838,145	-		HUW76_08760	0.64	-2.4
1,838,145	-		HUW76_08760	0.64	-4.3
1,838,145	-		HUW76_08760	0.64	-4.2
1,838,145	-		HUW76_08760	0.64	-4.8
1,838,152	-		HUW76_08760	0.65	-3.2
1,838,152	-		HUW76_08760	0.65	-3.5
1,838,154	+		HUW76_08760	0.65	-3.3
1,838,154	+		HUW76_08760	0.65	-3.3
1,838,167	-		HUW76_08760	0.66	-4.3
1,838,212	+		HUW76_08760	0.69	-3.2
1,838,212	+		HUW76_08760	0.69	-3.5
1,838,246	+		HUW76_08760	0.72	-4.0
1,838,246	+		HUW76_08760	0.72	-2.9
1,838,254	-		HUW76_08760	0.73	-5.3
1,838,254	-		HUW76_08760	0.73	-4.6
1,838,254	-		HUW76_08760	0.73	-2.9
1,838,254	-		HUW76_08760	0.73	-2.4
1,838,303	+		HUW76_08760	0.77	-2.5
1,838,303	+		HUW76_08760	0.77	-0.7
1,838,304	+		HUW76_08760	0.77	-1.1
1,838,313	-		HUW76_08760	0.77	-4.8
1,838,313	-		HUW76_08760	0.77	-4.1
1,838,315	+		HUW76_08760	0.77	-4.0
1,838,323	-		HUW76_08760	0.78	-5.1
1,838,325	+		HUW76_08760	0.78	-4.6
1,838,325	+		HUW76_08760	0.78	-2.0
1,838,333	-		HUW76_08760	0.79	-4.2
1,838,333	-		HUW76_08760	0.79	-2.0
1,838,337	+		HUW76_08760	0.79	-3.3
1,838,342	+		HUW76_08760	0.80	-2.1
1,838,343	+		HUW76_08760	0.80	-3.9
1,838,343	+		HUW76_08760	0.80	-2.1
1,838,343	+		HUW76_08760	0.80	-3.3
1,838,351	-		HUW76_08760	0.80	-5.1
1,838,351	-		HUW76_08760	0.80	+0.8
1,838,360	-		HUW76_08760	0.81	-1.9
1,838,360	-		HUW76_08760	0.81	-2.3
1,838,384	-		HUW76_08760	0.83	-4.9
1,838,384	-		HUW76_08760	0.83	-3.1
1,838,388	+		HUW76_08760	0.83	-2.6
1,838,395	-		HUW76_08760	0.84	-3.5
1,838,395	-		HUW76_08760	0.84	-4.1
1,838,397	-		HUW76_08760	0.84	-4.4
1,838,431	+		HUW76_08760	0.87	-2.3
1,838,431	+		HUW76_08760	0.87	-3.8
1,838,434	+		HUW76_08760	0.87	-2.2
1,838,494	-				-4.1
1,838,607	-				-0.5
1,838,607	-				-3.6
1,838,621	-				-3.1
1,838,621	-				+0.3
1,838,786	+				-3.8
1,838,786	+				-1.0
1,838,830	+				-2.0
1,838,830	+				-1.7
1,838,834	+				-3.8
1,838,837	-				-4.9
1,838,901	+		HUW76_08765	0.11	+0.1
1,838,901	+		HUW76_08765	0.11	+0.0
1,838,933	-		HUW76_08765	0.15	-3.9
1,838,960	+		HUW76_08765	0.18	-1.8
1,839,059	+		HUW76_08765	0.29	+0.1
1,839,059	-		HUW76_08765	0.29	-5.5
1,839,060	-		HUW76_08765	0.29	-4.8
1,839,060	-		HUW76_08765	0.29	-2.2
1,839,122	+		HUW76_08765	0.36	-3.1
1,839,122	+		HUW76_08765	0.36	-3.1
1,839,122	+		HUW76_08765	0.36	-0.7
1,839,122	+		HUW76_08765	0.36	-1.1
1,839,122	+		HUW76_08765	0.36	-0.5
1,839,122	+		HUW76_08765	0.36	-2.3
1,839,130	-		HUW76_08765	0.37	-3.9
1,839,130	-		HUW76_08765	0.37	-3.8
1,839,130	-		HUW76_08765	0.37	-4.2
1,839,137	-		HUW76_08765	0.38	-5.0
1,839,253	+		HUW76_08765	0.51	-3.0
1,839,300	+		HUW76_08765	0.56	-1.7
1,839,300	+		HUW76_08765	0.56	-2.0
1,839,302	+		HUW76_08765	0.56	-2.4
1,839,302	+		HUW76_08765	0.56	-2.7
1,839,304	+		HUW76_08765	0.57	-3.0
1,839,312	+		HUW76_08765	0.58	-1.1
1,839,312	+		HUW76_08765	0.58	-2.4
1,839,312	+		HUW76_08765	0.58	-1.6
1,839,314	+		HUW76_08765	0.58	-0.3
1,839,314	+		HUW76_08765	0.58	-1.6
1,839,322	-		HUW76_08765	0.59	-2.2
1,839,422	+		HUW76_08765	0.70	-0.4
1,839,422	+		HUW76_08765	0.70	-2.2
1,839,441	+		HUW76_08765	0.72	-0.5
1,839,441	+		HUW76_08765	0.72	-2.4
1,839,441	+		HUW76_08765	0.72	-1.9
1,839,441	+		HUW76_08765	0.72	-1.8
1,839,449	-		HUW76_08765	0.73	-6.2
1,839,490	-		HUW76_08765	0.78	-1.7