Strain Fitness in Fusobacterium nucleatum SB010 around HUW76_01360

Experiment: G1M1_D7

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHUW76_01355 and HUW76_01360 are separated by 8 nucleotidesHUW76_01360 and HUW76_01365 are separated by 8 nucleotidesHUW76_01365 and HUW76_01370 overlap by 4 nucleotides HUW76_01355: HUW76_01355 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 265,367 to 266,557 _01355 HUW76_01360: HUW76_01360 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 266,566 to 267,444 _01360 HUW76_01365: HUW76_01365 - PIG-L family deacetylase, at 267,453 to 268,088 _01365 HUW76_01370: HUW76_01370 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 268,085 to 269,032 _01370 Position (kb) 266 267 268Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 265.575 kb on - strand, within HUW76_01355at 265.601 kb on + strand, within HUW76_01355at 265.601 kb on + strand, within HUW76_01355at 265.622 kb on - strand, within HUW76_01355at 265.634 kb on + strand, within HUW76_01355at 265.634 kb on + strand, within HUW76_01355at 265.634 kb on + strand, within HUW76_01355at 265.640 kb on - strand, within HUW76_01355at 265.640 kb on - strand, within HUW76_01355at 265.642 kb on - strand, within HUW76_01355at 265.693 kb on + strand, within HUW76_01355at 265.693 kb on + strand, within HUW76_01355at 265.724 kb on + strand, within HUW76_01355at 265.724 kb on + strand, within HUW76_01355at 265.731 kb on - strand, within HUW76_01355at 265.731 kb on - strand, within HUW76_01355at 265.757 kb on + strand, within HUW76_01355at 265.757 kb on + strand, within HUW76_01355at 265.789 kb on - strand, within HUW76_01355at 265.892 kb on + strand, within HUW76_01355at 265.900 kb on - strand, within HUW76_01355at 266.002 kb on - strand, within HUW76_01355at 266.002 kb on - strand, within HUW76_01355at 266.092 kb on - strand, within HUW76_01355at 266.096 kb on + strand, within HUW76_01355at 266.104 kb on - strand, within HUW76_01355at 266.104 kb on - strand, within HUW76_01355at 266.104 kb on - strand, within HUW76_01355at 266.104 kb on - strand, within HUW76_01355at 266.104 kb on - strand, within HUW76_01355at 266.104 kb on - strand, within HUW76_01355at 266.104 kb on - strand, within HUW76_01355at 266.104 kb on - strand, within HUW76_01355at 266.104 kb on - strand, within HUW76_01355at 266.165 kb on + strand, within HUW76_01355at 266.173 kb on - strand, within HUW76_01355at 266.190 kb on + strand, within HUW76_01355at 266.190 kb on + strand, within HUW76_01355at 266.363 kb on + strand, within HUW76_01355at 266.369 kb on - strand, within HUW76_01355at 266.370 kb on - strand, within HUW76_01355at 266.370 kb on - strand, within HUW76_01355at 266.376 kb on - strand, within HUW76_01355at 266.378 kb on + strand, within HUW76_01355at 266.380 kb on + strand, within HUW76_01355at 266.380 kb on + strand, within HUW76_01355at 266.380 kb on + strand, within HUW76_01355at 266.380 kb on + strand, within HUW76_01355at 266.380 kb on + strand, within HUW76_01355at 266.380 kb on + strand, within HUW76_01355at 266.380 kb on + strand, within HUW76_01355at 266.380 kb on + strand, within HUW76_01355at 266.380 kb on + strand, within HUW76_01355at 266.380 kb on + strand, within HUW76_01355at 266.380 kb on + strand, within HUW76_01355at 266.380 kb on + strand, within HUW76_01355at 266.385 kb on + strand, within HUW76_01355at 266.385 kb on + strand, within HUW76_01355at 266.386 kb on - strand, within HUW76_01355at 266.386 kb on - strand, within HUW76_01355at 266.388 kb on - strand, within HUW76_01355at 266.388 kb on - strand, within HUW76_01355at 266.388 kb on - strand, within HUW76_01355at 266.388 kb on - strand, within HUW76_01355at 266.388 kb on - strand, within HUW76_01355at 266.388 kb on - strand, within HUW76_01355at 266.388 kb on - strand, within HUW76_01355at 266.388 kb on - strand, within HUW76_01355at 266.388 kb on - strand, within HUW76_01355at 266.388 kb on - strand, within HUW76_01355at 266.388 kb on - strand, within HUW76_01355at 266.400 kb on - strand, within HUW76_01355at 266.434 kb on - strand, within HUW76_01355at 266.453 kb on + strandat 266.453 kb on + strandat 266.454 kb on - strandat 266.459 kb on - strandat 266.461 kb on - strandat 266.551 kb on - strandat 266.621 kb on + strandat 266.621 kb on + strandat 266.628 kb on + strandat 266.628 kb on + strandat 266.633 kb on + strandat 266.635 kb on + strandat 266.635 kb on + strandat 266.641 kb on - strandat 266.735 kb on + strand, within HUW76_01360at 266.735 kb on - strand, within HUW76_01360at 266.735 kb on - strand, within HUW76_01360at 266.802 kb on + strand, within HUW76_01360at 266.945 kb on - strand, within HUW76_01360at 266.945 kb on - strand, within HUW76_01360at 267.011 kb on + strand, within HUW76_01360at 267.011 kb on + strand, within HUW76_01360at 267.129 kb on + strand, within HUW76_01360at 267.137 kb on - strand, within HUW76_01360at 267.182 kb on + strand, within HUW76_01360at 267.182 kb on + strand, within HUW76_01360at 267.205 kb on + strand, within HUW76_01360at 267.205 kb on + strand, within HUW76_01360at 267.236 kb on + strand, within HUW76_01360at 267.244 kb on + strand, within HUW76_01360at 267.244 kb on + strand, within HUW76_01360at 267.301 kb on + strand, within HUW76_01360at 267.301 kb on + strand, within HUW76_01360at 267.318 kb on - strand, within HUW76_01360at 267.347 kb on + strand, within HUW76_01360at 267.381 kb on - strandat 267.389 kb on - strandat 267.474 kb on + strandat 267.474 kb on + strandat 267.492 kb on + strandat 267.502 kb on + strandat 267.507 kb on + strandat 267.510 kb on - strandat 267.528 kb on - strand, within HUW76_01365at 267.536 kb on - strand, within HUW76_01365at 267.831 kb on + strand, within HUW76_01365at 267.831 kb on + strand, within HUW76_01365at 267.832 kb on + strand, within HUW76_01365at 267.832 kb on + strand, within HUW76_01365at 267.832 kb on + strand, within HUW76_01365at 267.832 kb on + strand, within HUW76_01365at 267.832 kb on + strand, within HUW76_01365at 267.832 kb on + strand, within HUW76_01365at 267.832 kb on + strand, within HUW76_01365at 267.840 kb on - strand, within HUW76_01365at 267.840 kb on - strand, within HUW76_01365at 267.840 kb on - strand, within HUW76_01365at 267.840 kb on - strand, within HUW76_01365at 267.840 kb on - strand, within HUW76_01365at 267.840 kb on - strand, within HUW76_01365at 267.853 kb on + strand, within HUW76_01365at 267.853 kb on + strand, within HUW76_01365at 268.001 kb on + strand, within HUW76_01365at 268.010 kb on + strand, within HUW76_01365at 268.010 kb on + strand, within HUW76_01365at 268.012 kb on + strand, within HUW76_01365at 268.012 kb on + strand, within HUW76_01365at 268.012 kb on + strand, within HUW76_01365at 268.012 kb on + strand, within HUW76_01365at 268.012 kb on + strand, within HUW76_01365at 268.020 kb on - strand, within HUW76_01365at 268.020 kb on - strand, within HUW76_01365at 268.022 kb on + strand, within HUW76_01365at 268.022 kb on + strand, within HUW76_01365at 268.022 kb on + strand, within HUW76_01365at 268.022 kb on + strand, within HUW76_01365at 268.022 kb on + strand, within HUW76_01365at 268.022 kb on + strand, within HUW76_01365at 268.022 kb on + strand, within HUW76_01365at 268.030 kb on - strandat 268.030 kb on - strandat 268.030 kb on - strandat 268.030 kb on - strandat 268.030 kb on - strandat 268.030 kb on - strandat 268.030 kb on - strandat 268.030 kb on - strandat 268.030 kb on - strandat 268.030 kb on - strandat 268.030 kb on - strandat 268.030 kb on - strandat 268.082 kb on + strandat 268.112 kb on + strandat 268.120 kb on - strandat 268.154 kb on - strandat 268.154 kb on - strandat 268.158 kb on + strandat 268.163 kb on + strandat 268.163 kb on + strandat 268.163 kb on + strandat 268.163 kb on + strandat 268.171 kb on - strandat 268.171 kb on - strandat 268.227 kb on + strand, within HUW76_01370at 268.227 kb on + strand, within HUW76_01370at 268.227 kb on + strand, within HUW76_01370at 268.235 kb on - strand, within HUW76_01370at 268.235 kb on - strand, within HUW76_01370at 268.235 kb on - strand, within HUW76_01370at 268.235 kb on - strand, within HUW76_01370at 268.316 kb on - strand, within HUW76_01370at 268.316 kb on - strand, within HUW76_01370at 268.399 kb on + strand, within HUW76_01370at 268.403 kb on + strand, within HUW76_01370at 268.403 kb on + strand, within HUW76_01370at 268.403 kb on + strand, within HUW76_01370at 268.403 kb on + strand, within HUW76_01370at 268.403 kb on + strand, within HUW76_01370at 268.403 kb on + strand, within HUW76_01370at 268.403 kb on + strand, within HUW76_01370at 268.411 kb on - strand, within HUW76_01370at 268.411 kb on - strand, within HUW76_01370at 268.411 kb on - strand, within HUW76_01370at 268.411 kb on - strand, within HUW76_01370at 268.428 kb on - strand, within HUW76_01370

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Per-strain Table

Position Strand Gene LocusTag Fraction G1M1_D7
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265,575 - HUW76_01355 0.17 -4.7
265,601 + HUW76_01355 0.20 -3.6
265,601 + HUW76_01355 0.20 -2.3
265,622 - HUW76_01355 0.21 -2.4
265,634 + HUW76_01355 0.22 -3.8
265,634 + HUW76_01355 0.22 -3.3
265,634 + HUW76_01355 0.22 -1.2
265,640 - HUW76_01355 0.23 -2.7
265,640 - HUW76_01355 0.23 -1.9
265,642 - HUW76_01355 0.23 -5.4
265,693 + HUW76_01355 0.27 -2.9
265,693 + HUW76_01355 0.27 -3.9
265,724 + HUW76_01355 0.30 -2.2
265,724 + HUW76_01355 0.30 -0.9
265,731 - HUW76_01355 0.31 -3.3
265,731 - HUW76_01355 0.31 -2.8
265,757 + HUW76_01355 0.33 -3.5
265,757 + HUW76_01355 0.33 -3.3
265,789 - HUW76_01355 0.35 -4.9
265,892 + HUW76_01355 0.44 -5.1
265,900 - HUW76_01355 0.45 -1.3
266,002 - HUW76_01355 0.53 -1.4
266,002 - HUW76_01355 0.53 -2.6
266,092 - HUW76_01355 0.61 -3.2
266,096 + HUW76_01355 0.61 -3.1
266,104 - HUW76_01355 0.62 -1.4
266,104 - HUW76_01355 0.62 -3.6
266,104 - HUW76_01355 0.62 -3.2
266,104 - HUW76_01355 0.62 -1.1
266,104 - HUW76_01355 0.62 -2.3
266,104 - HUW76_01355 0.62 -1.1
266,104 - HUW76_01355 0.62 -4.7
266,104 - HUW76_01355 0.62 -1.6
266,104 - HUW76_01355 0.62 -3.4
266,165 + HUW76_01355 0.67 -4.9
266,173 - HUW76_01355 0.68 -3.4
266,190 + HUW76_01355 0.69 -3.7
266,190 + HUW76_01355 0.69 -3.1
266,363 + HUW76_01355 0.84 -5.4
266,369 - HUW76_01355 0.84 -3.9
266,370 - HUW76_01355 0.84 -3.0
266,370 - HUW76_01355 0.84 -2.4
266,376 - HUW76_01355 0.85 -4.6
266,378 + HUW76_01355 0.85 -4.2
266,380 + HUW76_01355 0.85 -2.5
266,380 + HUW76_01355 0.85 -2.3
266,380 + HUW76_01355 0.85 -2.6
266,380 + HUW76_01355 0.85 -5.2
266,380 + HUW76_01355 0.85 -2.0
266,380 + HUW76_01355 0.85 -2.2
266,380 + HUW76_01355 0.85 -2.5
266,380 + HUW76_01355 0.85 -3.0
266,380 + HUW76_01355 0.85 -2.2
266,380 + HUW76_01355 0.85 -4.2
266,380 + HUW76_01355 0.85 -1.2
266,380 + HUW76_01355 0.85 -5.5
266,385 + HUW76_01355 0.85 +0.2
266,385 + HUW76_01355 0.85 -4.7
266,386 - HUW76_01355 0.86 -3.7
266,386 - HUW76_01355 0.86 -1.9
266,388 - HUW76_01355 0.86 +0.1
266,388 - HUW76_01355 0.86 -5.7
266,388 - HUW76_01355 0.86 -0.5
266,388 - HUW76_01355 0.86 -2.8
266,388 - HUW76_01355 0.86 -1.9
266,388 - HUW76_01355 0.86 -0.5
266,388 - HUW76_01355 0.86 -5.1
266,388 - HUW76_01355 0.86 -2.6
266,388 - HUW76_01355 0.86 -4.2
266,388 - HUW76_01355 0.86 -4.4
266,388 - HUW76_01355 0.86 -1.7
266,400 - HUW76_01355 0.87 -3.8
266,434 - HUW76_01355 0.90 -4.3
266,453 + -3.4
266,453 + -2.6
266,454 - -3.4
266,459 - -4.3
266,461 - -4.1
266,551 - -4.9
266,621 + -1.6
266,621 + -0.4
266,628 + -1.6
266,628 + -1.9
266,633 + -4.6
266,635 + -1.6
266,635 + +0.0
266,641 - -0.7
266,735 + HUW76_01360 0.19 -2.9
266,735 - HUW76_01360 0.19 -1.8
266,735 - HUW76_01360 0.19 -3.6
266,802 + HUW76_01360 0.27 -3.1
266,945 - HUW76_01360 0.43 +0.4
266,945 - HUW76_01360 0.43 -1.8
267,011 + HUW76_01360 0.51 -1.1
267,011 + HUW76_01360 0.51 -2.8
267,129 + HUW76_01360 0.64 +0.9
267,137 - HUW76_01360 0.65 +1.1
267,182 + HUW76_01360 0.70 -3.7
267,182 + HUW76_01360 0.70 -3.4
267,205 + HUW76_01360 0.73 -3.2
267,205 + HUW76_01360 0.73 -4.6
267,236 + HUW76_01360 0.76 -2.8
267,244 + HUW76_01360 0.77 -2.6
267,244 + HUW76_01360 0.77 -2.9
267,301 + HUW76_01360 0.84 -3.4
267,301 + HUW76_01360 0.84 -3.8
267,318 - HUW76_01360 0.86 -1.7
267,347 + HUW76_01360 0.89 -1.7
267,381 - -0.8
267,389 - -4.0
267,474 + -4.7
267,474 + -5.4
267,492 + -4.8
267,502 + -6.1
267,507 + -4.6
267,510 - -0.6
267,528 - HUW76_01365 0.12 -2.4
267,536 - HUW76_01365 0.13 -1.3
267,831 + HUW76_01365 0.59 -6.5
267,831 + HUW76_01365 0.59 -6.4
267,832 + HUW76_01365 0.60 -5.1
267,832 + HUW76_01365 0.60 -3.9
267,832 + HUW76_01365 0.60 -6.1
267,832 + HUW76_01365 0.60 -5.1
267,832 + HUW76_01365 0.60 -4.4
267,832 + HUW76_01365 0.60 -4.2
267,832 + HUW76_01365 0.60 -5.3
267,840 - HUW76_01365 0.61 -1.3
267,840 - HUW76_01365 0.61 -3.1
267,840 - HUW76_01365 0.61 -4.8
267,840 - HUW76_01365 0.61 -4.4
267,840 - HUW76_01365 0.61 -3.4
267,840 - HUW76_01365 0.61 -1.6
267,853 + HUW76_01365 0.63 -3.5
267,853 + HUW76_01365 0.63 -4.3
268,001 + HUW76_01365 0.86 -4.4
268,010 + HUW76_01365 0.88 -2.9
268,010 + HUW76_01365 0.88 -5.1
268,012 + HUW76_01365 0.88 -4.7
268,012 + HUW76_01365 0.88 -3.7
268,012 + HUW76_01365 0.88 -0.7
268,012 + HUW76_01365 0.88 -5.6
268,012 + HUW76_01365 0.88 -2.3
268,020 - HUW76_01365 0.89 -2.1
268,020 - HUW76_01365 0.89 -4.3
268,022 + HUW76_01365 0.89 -2.0
268,022 + HUW76_01365 0.89 -5.6
268,022 + HUW76_01365 0.89 -5.2
268,022 + HUW76_01365 0.89 -4.7
268,022 + HUW76_01365 0.89 -4.4
268,022 + HUW76_01365 0.89 -4.0
268,022 + HUW76_01365 0.89 -4.8
268,030 - -1.5
268,030 - +0.2
268,030 - -3.2
268,030 - -0.2
268,030 - -1.2
268,030 - -1.9
268,030 - -2.4
268,030 - -1.4
268,030 - -1.2
268,030 - -4.0
268,030 - -4.8
268,030 - -4.1
268,082 + -1.8
268,112 + -2.9
268,120 - +1.1
268,154 - -3.9
268,154 - -3.7
268,158 + -4.2
268,163 + -0.6
268,163 + -5.1
268,163 + -3.3
268,163 + -1.7
268,171 - -1.7
268,171 - -3.1
268,227 + HUW76_01370 0.15 -3.8
268,227 + HUW76_01370 0.15 -0.4
268,227 + HUW76_01370 0.15 -1.7
268,235 - HUW76_01370 0.16 -3.6
268,235 - HUW76_01370 0.16 -2.5
268,235 - HUW76_01370 0.16 -3.7
268,235 - HUW76_01370 0.16 -1.4
268,316 - HUW76_01370 0.24 -2.9
268,316 - HUW76_01370 0.24 -0.2
268,399 + HUW76_01370 0.33 -3.8
268,403 + HUW76_01370 0.34 -2.1
268,403 + HUW76_01370 0.34 -0.0
268,403 + HUW76_01370 0.34 -3.5
268,403 + HUW76_01370 0.34 -1.2
268,403 + HUW76_01370 0.34 -1.6
268,403 + HUW76_01370 0.34 -3.1
268,403 + HUW76_01370 0.34 -3.4
268,411 - HUW76_01370 0.34 -1.7
268,411 - HUW76_01370 0.34 -3.4
268,411 - HUW76_01370 0.34 -3.5
268,411 - HUW76_01370 0.34 -1.0
268,428 - HUW76_01370 0.36 -2.8

Or see this region's nucleotide sequence