Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12640

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 5 mM
2,797,478	+		LRK53_RS12635	0.46	+2.1
2,797,478	+		LRK53_RS12635	0.46	+1.1
2,797,478	+		LRK53_RS12635	0.46	+0.1
2,797,478	+		LRK53_RS12635	0.46	-0.4
2,797,478	+		LRK53_RS12635	0.46	-2.2
2,797,478	+		LRK53_RS12635	0.46	-0.9
2,797,478	+		LRK53_RS12635	0.46	-2.4
2,797,478	+		LRK53_RS12635	0.46	-0.5
2,797,478	+		LRK53_RS12635	0.46	-0.2
2,797,478	+		LRK53_RS12635	0.46	+0.3
2,797,478	+		LRK53_RS12635	0.46	+2.1
2,797,478	+		LRK53_RS12635	0.46	-1.5
2,797,479	-		LRK53_RS12635	0.46	-1.9
2,797,479	-		LRK53_RS12635	0.46	-1.2
2,797,479	-		LRK53_RS12635	0.46	+1.1
2,797,479	-		LRK53_RS12635	0.46	+1.1
2,797,479	-		LRK53_RS12635	0.46	-0.5
2,797,479	-		LRK53_RS12635	0.46	-1.5
2,797,479	-		LRK53_RS12635	0.46	-1.0
2,797,479	-		LRK53_RS12635	0.46	+1.7
2,797,479	-		LRK53_RS12635	0.46	-1.0
2,797,479	-		LRK53_RS12635	0.46	-1.1
2,797,479	-		LRK53_RS12635	0.46	-0.9
2,797,479	-		LRK53_RS12635	0.46	-0.4
2,797,817	+		LRK53_RS12635	0.88	-0.4
2,797,818	+		LRK53_RS12635	0.88	+1.5
2,797,818	+		LRK53_RS12635	0.88	-2.4
2,797,819	-		LRK53_RS12635	0.88	-1.2
2,797,819	-		LRK53_RS12635	0.88	-0.1
2,797,819	-		LRK53_RS12635	0.88	+0.1
2,797,896	+				-0.3
2,797,948	+				-0.5
2,797,948	+				-1.5
2,797,949	-				+1.1
2,797,949	-				-0.2
2,798,025	+				-0.5
2,798,026	-				+0.1
2,798,074	-				+0.1
2,798,074	-				-0.7
2,798,165	-				+0.4
2,798,370	-				+0.0
2,798,370	-				+0.1
2,798,370	-				+0.1
2,798,370	-				-1.5
2,798,370	-				-0.5
2,798,370	-				-0.5
2,798,473	+		LRK53_RS12640	0.19	-1.2
2,798,473	+		LRK53_RS12640	0.19	-0.3
2,798,473	+		LRK53_RS12640	0.19	+0.3
2,798,473	+		LRK53_RS12640	0.19	+1.1
2,798,474	-		LRK53_RS12640	0.19	-0.8
2,798,474	-		LRK53_RS12640	0.19	+0.8
2,798,474	-		LRK53_RS12640	0.19	-1.0
2,798,717	+		LRK53_RS12640	0.75	+0.1
2,798,717	+		LRK53_RS12640	0.75	+1.1
2,798,718	-		LRK53_RS12640	0.75	-0.5
2,798,718	-		LRK53_RS12640	0.75	+1.1
2,798,718	-		LRK53_RS12640	0.75	-1.6
2,798,718	-		LRK53_RS12640	0.75	+2.1
2,798,812	+				+0.1
2,798,813	-				+0.6
2,798,813	-				-1.2
2,798,987	+				-1.2
2,798,987	+				+1.1
2,798,988	-				+0.4
2,798,988	-				-1.7
2,799,000	+				-0.1
2,799,000	+				-0.5
2,799,000	+				-1.4
2,799,000	+				-1.0
2,799,000	+				-0.9
2,799,000	+				+0.1
2,799,000	+				+0.7
2,799,027	+				-0.4
2,799,027	+				+1.1
2,799,027	+				+0.1
2,799,027	+				+1.1
2,799,028	-				-1.7
2,799,028	-				+0.5
2,799,028	-				+0.1
2,799,028	-				-0.5
2,799,028	-				-0.5
2,799,075	+		LRK53_RS12645	0.17	+1.1
2,799,076	-		LRK53_RS12645	0.17	-1.1
2,799,076	-		LRK53_RS12645	0.17	-0.1
2,799,294	+		LRK53_RS12645	0.61	-1.8
2,799,294	+		LRK53_RS12645	0.61	-0.5
2,799,294	+		LRK53_RS12645	0.61	-1.6
2,799,379	-		LRK53_RS12645	0.78	+0.4
2,799,390	+		LRK53_RS12645	0.80	+0.5
2,799,390	+		LRK53_RS12645	0.80	+2.4
2,799,390	+		LRK53_RS12645	0.80	-0.8
2,799,390	+		LRK53_RS12645	0.80	+0.4
2,799,390	+		LRK53_RS12645	0.80	+0.7
2,799,390	+		LRK53_RS12645	0.80	-0.9
2,799,391	-		LRK53_RS12645	0.80	+0.1
2,799,391	-		LRK53_RS12645	0.80	-0.1
2,799,391	-		LRK53_RS12645	0.80	+0.1
2,799,391	-		LRK53_RS12645	0.80	+0.7
2,799,408	+		LRK53_RS12645	0.83	-0.9
2,799,409	-		LRK53_RS12645	0.84	-0.8
2,799,610	+		LRK53_RS12650	0.16	-0.0
2,799,610	+		LRK53_RS12650	0.16	+1.1
2,799,610	+		LRK53_RS12650	0.16	-2.4
2,799,610	+		LRK53_RS12650	0.16	+2.1
2,799,610	+		LRK53_RS12650	0.16	+0.1
2,799,610	+		LRK53_RS12650	0.16	-1.7
2,799,610	+		LRK53_RS12650	0.16	-0.5
2,799,610	+		LRK53_RS12650	0.16	-0.9
2,799,610	+		LRK53_RS12650	0.16	-0.2
2,799,610	+		LRK53_RS12650	0.16	-1.1
2,799,610	+		LRK53_RS12650	0.16	+0.4
2,799,610	+		LRK53_RS12650	0.16	-1.2
2,799,611	-		LRK53_RS12650	0.16	-0.9
2,799,611	-		LRK53_RS12650	0.16	-0.7
2,799,611	-		LRK53_RS12650	0.16	-1.4
2,799,611	-		LRK53_RS12650	0.16	-0.5
2,799,611	-		LRK53_RS12650	0.16	+0.1
2,799,611	-		LRK53_RS12650	0.16	-0.7
2,799,611	-		LRK53_RS12650	0.16	+0.7
2,799,611	-		LRK53_RS12650	0.16	-0.5
2,799,611	-		LRK53_RS12650	0.16	+1.1
2,799,611	-		LRK53_RS12650	0.16	-0.7
2,799,611	-		LRK53_RS12650	0.16	+1.1
2,799,611	-		LRK53_RS12650	0.16	+0.1
2,799,611	-		LRK53_RS12650	0.16	+0.1
2,799,611	-		LRK53_RS12650	0.16	+0.7
2,799,617	-		LRK53_RS12650	0.17	-0.9
2,799,628	+		LRK53_RS12650	0.19	+0.1
2,799,628	+		LRK53_RS12650	0.19	-0.5