Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08275

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 5 mM
1,859,140	+		LRK53_RS08265	0.47	-1.5
1,859,140	+		LRK53_RS08265	0.47	+0.7
1,859,140	+		LRK53_RS08265	0.47	+1.1
1,859,140	+		LRK53_RS08265	0.47	+0.3
1,859,140	+		LRK53_RS08265	0.47	-1.2
1,859,140	+		LRK53_RS08265	0.47	+0.1
1,859,141	-		LRK53_RS08265	0.48	-0.3
1,859,518	+				+1.1
1,859,519	-				+2.7
1,859,519	-				+0.1
1,859,519	-				-1.5
1,859,898	+		LRK53_RS08270	0.57	-3.0
1,859,899	-		LRK53_RS08270	0.57	+0.1
1,859,899	-		LRK53_RS08270	0.57	-0.5
1,859,899	-		LRK53_RS08270	0.57	-1.2
1,859,899	-		LRK53_RS08270	0.57	-1.4
1,859,940	+		LRK53_RS08270	0.65	-1.2
1,859,940	+		LRK53_RS08270	0.65	-0.3
1,859,940	+		LRK53_RS08270	0.65	+0.5
1,859,940	+		LRK53_RS08270	0.65	-0.1
1,859,940	+		LRK53_RS08270	0.65	-1.6
1,859,941	-		LRK53_RS08270	0.65	+0.1
1,859,941	-		LRK53_RS08270	0.65	-0.5
1,859,941	-		LRK53_RS08270	0.65	-0.7
1,859,941	-		LRK53_RS08270	0.65	+0.3
1,859,941	-		LRK53_RS08270	0.65	+0.1
1,859,941	-		LRK53_RS08270	0.65	+0.8
1,859,941	-		LRK53_RS08270	0.65	-1.7
1,859,946	+		LRK53_RS08270	0.66	-1.6
1,859,946	+		LRK53_RS08270	0.66	-0.4
1,859,946	+		LRK53_RS08270	0.66	-0.9
1,859,946	+		LRK53_RS08270	0.66	-2.3
1,859,946	+		LRK53_RS08270	0.66	-0.6
1,859,946	+		LRK53_RS08270	0.66	+0.5
1,859,946	+		LRK53_RS08270	0.66	+1.7
1,859,946	+		LRK53_RS08270	0.66	-0.1
1,859,946	+		LRK53_RS08270	0.66	-0.9
1,859,946	+		LRK53_RS08270	0.66	+1.1
1,859,946	+		LRK53_RS08270	0.66	-0.7
1,859,947	-		LRK53_RS08270	0.67	+0.9
1,859,947	-		LRK53_RS08270	0.67	-0.2
1,860,260	+		LRK53_RS08275	0.12	+0.1
1,860,260	+		LRK53_RS08275	0.12	-0.2
1,860,260	+		LRK53_RS08275	0.12	+0.1
1,860,260	+		LRK53_RS08275	0.12	-2.5
1,860,261	-		LRK53_RS08275	0.12	+0.1
1,860,263	+		LRK53_RS08275	0.12	-0.3
1,860,264	-		LRK53_RS08275	0.12	+1.1
1,860,264	-		LRK53_RS08275	0.12	+1.1
1,860,264	-		LRK53_RS08275	0.12	-0.5
1,860,264	-		LRK53_RS08275	0.12	-0.9
1,860,300	-		LRK53_RS08275	0.15	-1.6
1,860,300	-		LRK53_RS08275	0.15	-1.2
1,860,764	+		LRK53_RS08275	0.52	-1.0
1,860,764	+		LRK53_RS08275	0.52	-1.5
1,860,764	+		LRK53_RS08275	0.52	-1.3
1,860,764	+		LRK53_RS08275	0.52	-0.7
1,860,764	+		LRK53_RS08275	0.52	-0.9
1,860,764	+		LRK53_RS08275	0.52	-0.7
1,860,764	+		LRK53_RS08275	0.52	-0.7
1,860,764	+		LRK53_RS08275	0.52	-0.4
1,860,765	-		LRK53_RS08275	0.52	+0.5
1,860,765	-		LRK53_RS08275	0.52	+1.5
1,860,765	-		LRK53_RS08275	0.52	-0.2
1,860,765	-		LRK53_RS08275	0.52	+0.3
1,860,765	-		LRK53_RS08275	0.52	+0.1
1,860,765	-		LRK53_RS08275	0.52	+0.8
1,860,765	-		LRK53_RS08275	0.52	+1.1
1,860,765	-		LRK53_RS08275	0.52	-0.6
1,860,765	-		LRK53_RS08275	0.52	+0.1
1,860,765	-		LRK53_RS08275	0.52	-1.5
1,860,770	+		LRK53_RS08275	0.53	-0.9
1,860,770	+		LRK53_RS08275	0.53	-0.5
1,860,771	-		LRK53_RS08275	0.53	-1.2
1,860,771	-		LRK53_RS08275	0.53	-1.0
1,860,771	-		LRK53_RS08275	0.53	-0.2
1,860,881	+		LRK53_RS08275	0.62	+0.5
1,860,881	+		LRK53_RS08275	0.62	-0.1
1,860,881	+		LRK53_RS08275	0.62	+1.1
1,860,881	+		LRK53_RS08275	0.62	+2.1
1,860,881	+		LRK53_RS08275	0.62	-0.8
1,860,882	-		LRK53_RS08275	0.62	+2.1
1,860,882	-		LRK53_RS08275	0.62	-2.0
1,860,882	-		LRK53_RS08275	0.62	+0.0
1,860,882	-		LRK53_RS08275	0.62	-0.9
1,860,882	-		LRK53_RS08275	0.62	-0.6
1,860,882	-		LRK53_RS08275	0.62	+1.1
1,860,882	-		LRK53_RS08275	0.62	-0.9
1,860,882	-		LRK53_RS08275	0.62	-0.0
1,861,238	+				-1.5
1,861,238	+				-2.0
1,861,238	+				-0.4
1,861,239	-				-0.9
1,861,239	-				-0.2
1,861,239	-				-1.2
1,861,239	-				-2.6
1,861,239	-				-0.5
1,861,411	+				-0.7
1,861,411	+				+1.1
1,861,411	+				-1.8
1,861,604	+				+1.7
1,861,604	+				-1.4
1,861,605	-				-0.5
1,861,903	+		LRK53_RS08280	0.18	+0.1
1,861,903	+		LRK53_RS08280	0.18	-0.3
1,861,903	+		LRK53_RS08280	0.18	-1.5
1,861,903	+		LRK53_RS08280	0.18	-0.9
1,861,903	+		LRK53_RS08280	0.18	-0.7
1,861,904	-		LRK53_RS08280	0.18	-0.5
1,861,904	-		LRK53_RS08280	0.18	+0.7
1,861,904	-		LRK53_RS08280	0.18	+0.1
1,861,904	-		LRK53_RS08280	0.18	-0.4
1,861,904	-		LRK53_RS08280	0.18	-0.5
1,862,014	-		LRK53_RS08280	0.26	+0.4
1,862,014	-		LRK53_RS08280	0.26	-1.2
1,862,034	-		LRK53_RS08280	0.27	+0.1
1,862,233	+		LRK53_RS08280	0.40	-1.9
1,862,233	+		LRK53_RS08280	0.40	+0.1
1,862,233	+		LRK53_RS08280	0.40	+2.7
1,862,233	+		LRK53_RS08280	0.40	-0.3
1,862,233	+		LRK53_RS08280	0.40	+0.1
1,862,233	+		LRK53_RS08280	0.40	-1.5
1,862,233	+		LRK53_RS08280	0.40	-0.2
1,862,234	-		LRK53_RS08280	0.40	+0.1
1,862,234	-		LRK53_RS08280	0.40	+1.1
1,862,234	-		LRK53_RS08280	0.40	+0.1
1,862,234	-		LRK53_RS08280	0.40	-1.3
1,862,234	-		LRK53_RS08280	0.40	-0.9
1,862,234	-		LRK53_RS08280	0.40	-1.9
1,862,234	-		LRK53_RS08280	0.40	-1.0