Experiment: G2M5_D4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_06390 and HUW76_06395 are separated by 21 nucleotides HUW76_06395 and HUW76_06400 are separated by 205 nucleotides
HUW76_06390: HUW76_06390 - ATP-binding protein, at 1,315,760 to 1,317,583
_06390
HUW76_06395: HUW76_06395 - hypothetical protein, at 1,317,605 to 1,318,513
_06395
HUW76_06400: HUW76_06400 - PASTA domain-containing protein, at 1,318,719 to 1,319,318
_06400
Position (kb)
1317
1318
1319 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5 at 1316.625 kb on + strand, within HUW76_06390 at 1316.633 kb on - strand, within HUW76_06390 at 1316.716 kb on - strand, within HUW76_06390 at 1316.872 kb on - strand, within HUW76_06390 at 1316.872 kb on - strand, within HUW76_06390 at 1316.872 kb on - strand, within HUW76_06390 at 1316.872 kb on - strand, within HUW76_06390 at 1316.878 kb on - strand, within HUW76_06390 at 1316.878 kb on - strand, within HUW76_06390 at 1316.885 kb on + strand, within HUW76_06390 at 1316.885 kb on + strand, within HUW76_06390 at 1316.905 kb on + strand, within HUW76_06390 at 1316.922 kb on - strand, within HUW76_06390 at 1316.993 kb on - strand, within HUW76_06390 at 1316.993 kb on - strand, within HUW76_06390 at 1317.113 kb on - strand, within HUW76_06390 at 1317.208 kb on - strand, within HUW76_06390 at 1317.216 kb on + strand, within HUW76_06390 at 1317.271 kb on + strand, within HUW76_06390 at 1317.271 kb on + strand, within HUW76_06390 at 1317.287 kb on + strand, within HUW76_06390 at 1317.287 kb on + strand, within HUW76_06390 at 1317.294 kb on + strand, within HUW76_06390 at 1317.328 kb on + strand, within HUW76_06390 at 1317.402 kb on - strand at 1317.402 kb on - strand at 1317.502 kb on - strand at 1317.502 kb on - strand at 1317.590 kb on + strand at 1317.590 kb on + strand at 1317.730 kb on + strand, within HUW76_06395 at 1317.730 kb on - strand, within HUW76_06395 at 1317.730 kb on - strand, within HUW76_06395 at 1317.738 kb on - strand, within HUW76_06395 at 1317.738 kb on - strand, within HUW76_06395 at 1317.749 kb on + strand, within HUW76_06395 at 1317.749 kb on + strand, within HUW76_06395 at 1317.766 kb on + strand, within HUW76_06395 at 1317.791 kb on + strand, within HUW76_06395 at 1317.841 kb on + strand, within HUW76_06395 at 1317.841 kb on + strand, within HUW76_06395 at 1317.844 kb on - strand, within HUW76_06395 at 1317.844 kb on - strand, within HUW76_06395 at 1317.904 kb on + strand, within HUW76_06395 at 1317.904 kb on + strand, within HUW76_06395 at 1317.960 kb on + strand, within HUW76_06395 at 1317.960 kb on + strand, within HUW76_06395 at 1317.960 kb on + strand, within HUW76_06395 at 1317.960 kb on + strand, within HUW76_06395 at 1317.961 kb on - strand, within HUW76_06395 at 1317.963 kb on - strand, within HUW76_06395 at 1317.968 kb on - strand, within HUW76_06395 at 1318.032 kb on + strand, within HUW76_06395 at 1318.032 kb on + strand, within HUW76_06395 at 1318.032 kb on + strand, within HUW76_06395 at 1318.032 kb on + strand, within HUW76_06395 at 1318.040 kb on - strand, within HUW76_06395 at 1318.097 kb on + strand, within HUW76_06395 at 1318.103 kb on + strand, within HUW76_06395 at 1318.145 kb on + strand, within HUW76_06395 at 1318.154 kb on + strand, within HUW76_06395 at 1318.220 kb on - strand, within HUW76_06395 at 1318.242 kb on + strand, within HUW76_06395 at 1318.244 kb on + strand, within HUW76_06395 at 1318.244 kb on + strand, within HUW76_06395 at 1318.411 kb on + strand, within HUW76_06395 at 1318.411 kb on + strand, within HUW76_06395 at 1318.411 kb on + strand, within HUW76_06395 at 1318.411 kb on + strand, within HUW76_06395 at 1318.419 kb on - strand, within HUW76_06395 at 1318.419 kb on - strand, within HUW76_06395 at 1318.419 kb on - strand, within HUW76_06395 at 1318.421 kb on + strand, within HUW76_06395 at 1318.440 kb on + strand at 1318.440 kb on + strand at 1318.449 kb on + strand at 1318.622 kb on + strand at 1318.700 kb on + strand at 1319.302 kb on + strand at 1319.431 kb on + strand at 1319.431 kb on + strand at 1319.449 kb on + strand at 1319.449 kb on + strand at 1319.459 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction G2M5_D4 remove 1,316,625 + HUW76_06390 0.47 +3.8 1,316,633 - HUW76_06390 0.48 -1.6 1,316,716 - HUW76_06390 0.52 +1.4 1,316,872 - HUW76_06390 0.61 +1.0 1,316,872 - HUW76_06390 0.61 +2.0 1,316,872 - HUW76_06390 0.61 +0.5 1,316,872 - HUW76_06390 0.61 -1.1 1,316,878 - HUW76_06390 0.61 +2.0 1,316,878 - HUW76_06390 0.61 +2.6 1,316,885 + HUW76_06390 0.62 +3.1 1,316,885 + HUW76_06390 0.62 +2.5 1,316,905 + HUW76_06390 0.63 +3.7 1,316,922 - HUW76_06390 0.64 -0.0 1,316,993 - HUW76_06390 0.68 -1.5 1,316,993 - HUW76_06390 0.68 -0.6 1,317,113 - HUW76_06390 0.74 -0.2 1,317,208 - HUW76_06390 0.79 -1.4 1,317,216 + HUW76_06390 0.80 +4.0 1,317,271 + HUW76_06390 0.83 +3.8 1,317,271 + HUW76_06390 0.83 +5.0 1,317,287 + HUW76_06390 0.84 +3.8 1,317,287 + HUW76_06390 0.84 +3.4 1,317,294 + HUW76_06390 0.84 +3.8 1,317,328 + HUW76_06390 0.86 +3.6 1,317,402 - +0.1 1,317,402 - -1.2 1,317,502 - +0.1 1,317,502 - -0.6 1,317,590 + +4.4 1,317,590 + +4.2 1,317,730 + HUW76_06395 0.14 +4.8 1,317,730 - HUW76_06395 0.14 -0.6 1,317,730 - HUW76_06395 0.14 +1.1 1,317,738 - HUW76_06395 0.15 +0.5 1,317,738 - HUW76_06395 0.15 +0.1 1,317,749 + HUW76_06395 0.16 +3.8 1,317,749 + HUW76_06395 0.16 +4.0 1,317,766 + HUW76_06395 0.18 +4.3 1,317,791 + HUW76_06395 0.20 +4.3 1,317,841 + HUW76_06395 0.26 +4.7 1,317,841 + HUW76_06395 0.26 +4.8 1,317,844 - HUW76_06395 0.26 +0.7 1,317,844 - HUW76_06395 0.26 -0.3 1,317,904 + HUW76_06395 0.33 +4.9 1,317,904 + HUW76_06395 0.33 +4.2 1,317,960 + HUW76_06395 0.39 +4.6 1,317,960 + HUW76_06395 0.39 +5.7 1,317,960 + HUW76_06395 0.39 +4.8 1,317,960 + HUW76_06395 0.39 +4.5 1,317,961 - HUW76_06395 0.39 +1.9 1,317,963 - HUW76_06395 0.39 -1.4 1,317,968 - HUW76_06395 0.40 +0.8 1,318,032 + HUW76_06395 0.47 +3.5 1,318,032 + HUW76_06395 0.47 +4.5 1,318,032 + HUW76_06395 0.47 +4.1 1,318,032 + HUW76_06395 0.47 +4.3 1,318,040 - HUW76_06395 0.48 +2.3 1,318,097 + HUW76_06395 0.54 +5.0 1,318,103 + HUW76_06395 0.55 +3.7 1,318,145 + HUW76_06395 0.59 +5.1 1,318,154 + HUW76_06395 0.60 +5.0 1,318,220 - HUW76_06395 0.68 -1.0 1,318,242 + HUW76_06395 0.70 +5.0 1,318,244 + HUW76_06395 0.70 +4.4 1,318,244 + HUW76_06395 0.70 +4.4 1,318,411 + HUW76_06395 0.89 +4.8 1,318,411 + HUW76_06395 0.89 +4.9 1,318,411 + HUW76_06395 0.89 +4.9 1,318,411 + HUW76_06395 0.89 +5.1 1,318,419 - HUW76_06395 0.90 +0.1 1,318,419 - HUW76_06395 0.90 +0.8 1,318,419 - HUW76_06395 0.90 +0.9 1,318,421 + HUW76_06395 0.90 +5.0 1,318,440 + +5.1 1,318,440 + +4.9 1,318,449 + +5.2 1,318,622 + +4.4 1,318,700 + +3.9 1,319,302 + +4.7 1,319,431 + +4.2 1,319,431 + +4.5 1,319,449 + +4.8 1,319,449 + +4.8 1,319,459 + +5.1
Or see this region's nucleotide sequence