Experiment: G2M5_D4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_01790 and HUW76_01795 are separated by 18 nucleotides HUW76_01795 and HUW76_01800 are separated by 17 nucleotides
HUW76_01790: HUW76_01790 - 3-aminobutyryl-CoA ammonia-lyase, at 352,358 to 352,744
_01790
HUW76_01795: HUW76_01795 - 3-keto-5-aminohexanoate cleavage protein, at 352,763 to 353,578
_01795
HUW76_01800: HUW76_01800 - L-erythro-3,5-diaminohexanoate dehydrogenase, at 353,596 to 354,633
_01800
Position (kb) 352
353
354 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6 at 351.769 kb on - strand at 351.769 kb on - strand at 351.769 kb on - strand at 351.769 kb on - strand at 351.769 kb on - strand at 351.769 kb on - strand at 352.023 kb on + strand at 352.024 kb on + strand at 352.024 kb on + strand at 352.024 kb on + strand at 352.024 kb on + strand at 352.030 kb on + strand at 352.030 kb on + strand at 352.032 kb on - strand at 352.032 kb on - strand at 352.032 kb on - strand at 352.038 kb on - strand at 352.086 kb on + strand at 352.093 kb on + strand at 352.093 kb on + strand at 352.101 kb on + strand at 352.101 kb on + strand at 352.101 kb on + strand at 352.102 kb on - strand at 352.107 kb on - strand at 352.109 kb on - strand at 352.109 kb on - strand at 352.109 kb on - strand at 352.109 kb on - strand at 352.109 kb on - strand at 352.109 kb on - strand at 352.109 kb on - strand at 352.113 kb on + strand at 352.113 kb on + strand at 352.126 kb on + strand at 352.127 kb on + strand at 352.142 kb on - strand at 352.225 kb on + strand at 352.225 kb on + strand at 352.225 kb on + strand at 352.225 kb on + strand at 352.225 kb on + strand at 352.242 kb on + strand at 352.242 kb on + strand at 352.260 kb on - strand at 352.279 kb on + strand at 352.279 kb on + strand at 352.279 kb on + strand at 352.279 kb on + strand at 352.279 kb on + strand at 352.284 kb on + strand at 352.287 kb on - strand at 352.301 kb on + strand at 352.301 kb on + strand at 352.301 kb on + strand at 352.301 kb on + strand at 352.301 kb on + strand at 352.309 kb on - strand at 352.309 kb on - strand at 352.309 kb on - strand at 352.309 kb on - strand at 352.309 kb on - strand at 352.309 kb on - strand at 352.395 kb on + strand at 352.461 kb on - strand, within HUW76_01790 at 352.493 kb on + strand, within HUW76_01790 at 352.498 kb on + strand, within HUW76_01790 at 352.506 kb on - strand, within HUW76_01790 at 352.506 kb on - strand, within HUW76_01790 at 352.506 kb on - strand, within HUW76_01790 at 352.513 kb on - strand, within HUW76_01790 at 352.513 kb on - strand, within HUW76_01790 at 352.513 kb on - strand, within HUW76_01790 at 352.653 kb on - strand, within HUW76_01790 at 352.695 kb on - strand, within HUW76_01790 at 352.695 kb on - strand, within HUW76_01790 at 352.729 kb on - strand at 352.789 kb on + strand at 352.792 kb on + strand at 352.797 kb on + strand at 352.831 kb on + strand at 352.831 kb on + strand at 352.831 kb on + strand at 352.831 kb on + strand at 352.831 kb on + strand at 352.831 kb on + strand at 352.831 kb on + strand at 352.831 kb on + strand at 352.837 kb on - strand at 352.837 kb on - strand at 352.837 kb on - strand at 352.839 kb on - strand at 352.839 kb on - strand at 352.839 kb on - strand at 352.839 kb on - strand at 352.839 kb on - strand at 352.839 kb on - strand at 352.839 kb on - strand at 352.839 kb on - strand at 352.839 kb on - strand at 352.839 kb on - strand at 352.839 kb on - strand at 352.839 kb on - strand at 352.889 kb on + strand, within HUW76_01795 at 352.897 kb on - strand, within HUW76_01795 at 352.916 kb on - strand, within HUW76_01795 at 352.916 kb on - strand, within HUW76_01795 at 352.919 kb on - strand, within HUW76_01795 at 352.919 kb on - strand, within HUW76_01795 at 352.983 kb on + strand, within HUW76_01795 at 352.997 kb on + strand, within HUW76_01795 at 353.029 kb on + strand, within HUW76_01795 at 353.029 kb on + strand, within HUW76_01795 at 353.033 kb on + strand, within HUW76_01795 at 353.041 kb on - strand, within HUW76_01795 at 353.043 kb on + strand, within HUW76_01795 at 353.043 kb on + strand, within HUW76_01795 at 353.043 kb on + strand, within HUW76_01795 at 353.043 kb on + strand, within HUW76_01795 at 353.044 kb on + strand, within HUW76_01795 at 353.051 kb on - strand, within HUW76_01795 at 353.051 kb on - strand, within HUW76_01795 at 353.052 kb on - strand, within HUW76_01795 at 353.052 kb on - strand, within HUW76_01795 at 353.206 kb on + strand, within HUW76_01795 at 353.206 kb on + strand, within HUW76_01795 at 353.211 kb on + strand, within HUW76_01795 at 353.211 kb on + strand, within HUW76_01795 at 353.218 kb on - strand, within HUW76_01795 at 353.256 kb on + strand, within HUW76_01795 at 353.256 kb on + strand, within HUW76_01795 at 353.258 kb on + strand, within HUW76_01795 at 353.258 kb on + strand, within HUW76_01795 at 353.301 kb on + strand, within HUW76_01795 at 353.310 kb on + strand, within HUW76_01795 at 353.341 kb on + strand, within HUW76_01795 at 353.342 kb on + strand, within HUW76_01795 at 353.342 kb on + strand, within HUW76_01795 at 353.342 kb on + strand, within HUW76_01795 at 353.404 kb on + strand, within HUW76_01795 at 353.404 kb on + strand, within HUW76_01795 at 353.405 kb on + strand, within HUW76_01795 at 353.405 kb on + strand, within HUW76_01795 at 353.416 kb on + strand, within HUW76_01795 at 353.452 kb on + strand, within HUW76_01795 at 353.452 kb on + strand, within HUW76_01795 at 353.452 kb on + strand, within HUW76_01795 at 353.524 kb on - strand at 353.613 kb on + strand at 353.613 kb on - strand at 353.630 kb on - strand at 353.630 kb on - strand at 353.717 kb on + strand, within HUW76_01800 at 353.723 kb on - strand, within HUW76_01800 at 353.723 kb on - strand, within HUW76_01800 at 353.765 kb on + strand, within HUW76_01800 at 353.770 kb on + strand, within HUW76_01800 at 353.770 kb on + strand, within HUW76_01800 at 353.770 kb on + strand, within HUW76_01800 at 353.770 kb on + strand, within HUW76_01800 at 353.856 kb on - strand, within HUW76_01800 at 353.962 kb on - strand, within HUW76_01800 at 354.116 kb on + strand, within HUW76_01800 at 354.116 kb on + strand, within HUW76_01800 at 354.124 kb on - strand, within HUW76_01800 at 354.145 kb on + strand, within HUW76_01800 at 354.147 kb on + strand, within HUW76_01800 at 354.163 kb on + strand, within HUW76_01800 at 354.163 kb on + strand, within HUW76_01800 at 354.171 kb on - strand, within HUW76_01800 at 354.192 kb on + strand, within HUW76_01800 at 354.211 kb on + strand, within HUW76_01800 at 354.211 kb on + strand, within HUW76_01800 at 354.216 kb on - strand, within HUW76_01800 at 354.216 kb on - strand, within HUW76_01800 at 354.218 kb on + strand, within HUW76_01800 at 354.218 kb on + strand, within HUW76_01800 at 354.218 kb on - strand, within HUW76_01800 at 354.226 kb on - strand, within HUW76_01800 at 354.226 kb on - strand, within HUW76_01800 at 354.226 kb on - strand, within HUW76_01800 at 354.226 kb on - strand, within HUW76_01800 at 354.226 kb on - strand, within HUW76_01800 at 354.226 kb on - strand, within HUW76_01800 at 354.238 kb on + strand, within HUW76_01800 at 354.238 kb on + strand, within HUW76_01800 at 354.245 kb on - strand, within HUW76_01800 at 354.245 kb on - strand, within HUW76_01800 at 354.246 kb on - strand, within HUW76_01800 at 354.246 kb on - strand, within HUW76_01800 at 354.276 kb on + strand, within HUW76_01800 at 354.276 kb on + strand, within HUW76_01800 at 354.327 kb on + strand, within HUW76_01800 at 354.374 kb on + strand, within HUW76_01800 at 354.385 kb on + strand, within HUW76_01800 at 354.385 kb on + strand, within HUW76_01800 at 354.385 kb on + strand, within HUW76_01800 at 354.385 kb on + strand, within HUW76_01800 at 354.385 kb on + strand, within HUW76_01800 at 354.385 kb on + strand, within HUW76_01800 at 354.385 kb on + strand, within HUW76_01800 at 354.393 kb on - strand, within HUW76_01800 at 354.393 kb on - strand, within HUW76_01800 at 354.395 kb on + strand, within HUW76_01800 at 354.395 kb on + strand, within HUW76_01800 at 354.403 kb on - strand, within HUW76_01800 at 354.454 kb on + strand, within HUW76_01800 at 354.454 kb on + strand, within HUW76_01800 at 354.462 kb on - strand, within HUW76_01800 at 354.462 kb on - strand, within HUW76_01800 at 354.493 kb on + strand, within HUW76_01800 at 354.509 kb on + strand, within HUW76_01800 at 354.543 kb on + strand at 354.543 kb on + strand at 354.551 kb on + strand at 354.551 kb on - strand at 354.551 kb on - strand at 354.565 kb on + strand at 354.565 kb on + strand at 354.565 kb on + strand at 354.565 kb on + strand at 354.572 kb on + strand at 354.572 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction G2M5_D4 remove 351,769 - +1.7 351,769 - +1.2 351,769 - +1.3 351,769 - +0.5 351,769 - +1.7 351,769 - +1.3 352,023 + +0.4 352,024 + +0.4 352,024 + +0.3 352,024 + -1.0 352,024 + +0.3 352,030 + +2.8 352,030 + +0.4 352,032 - -1.6 352,032 - +0.1 352,032 - +3.4 352,038 - +1.1 352,086 + -1.3 352,093 + +1.5 352,093 + +0.6 352,101 + -1.0 352,101 + +0.1 352,101 + +1.6 352,102 - +3.4 352,107 - +4.3 352,109 - -0.9 352,109 - -0.5 352,109 - +1.4 352,109 - -0.0 352,109 - +1.6 352,109 - +0.0 352,109 - +0.7 352,113 + +0.3 352,113 + +1.7 352,126 + +0.6 352,127 + +1.3 352,142 - -0.5 352,225 + +0.2 352,225 + -0.9 352,225 + +0.8 352,225 + -0.5 352,225 + +1.0 352,242 + -1.4 352,242 + +0.9 352,260 - +0.8 352,279 + +0.2 352,279 + -0.5 352,279 + +0.3 352,279 + -0.1 352,279 + +1.0 352,284 + -0.0 352,287 - +1.4 352,301 + -1.4 352,301 + -0.1 352,301 + -2.3 352,301 + +1.1 352,301 + -0.5 352,309 - +2.0 352,309 - +1.2 352,309 - +3.6 352,309 - +2.3 352,309 - +0.9 352,309 - +3.2 352,395 + +2.1 352,461 - HUW76_01790 0.27 +1.7 352,493 + HUW76_01790 0.35 +3.8 352,498 + HUW76_01790 0.36 +1.7 352,506 - HUW76_01790 0.38 -0.9 352,506 - HUW76_01790 0.38 +3.2 352,506 - HUW76_01790 0.38 +0.2 352,513 - HUW76_01790 0.40 +2.6 352,513 - HUW76_01790 0.40 +0.2 352,513 - HUW76_01790 0.40 -0.2 352,653 - HUW76_01790 0.76 +0.8 352,695 - HUW76_01790 0.87 +0.6 352,695 - HUW76_01790 0.87 +2.6 352,729 - +2.5 352,789 + +0.2 352,792 + -0.5 352,797 + +0.3 352,831 + +0.2 352,831 + -1.3 352,831 + -1.0 352,831 + +0.6 352,831 + -1.5 352,831 + +3.1 352,831 + -0.4 352,831 + -0.8 352,837 - +0.6 352,837 - +0.6 352,837 - +1.1 352,839 - +0.5 352,839 - +2.4 352,839 - -0.3 352,839 - -0.8 352,839 - +2.1 352,839 - -0.6 352,839 - +3.7 352,839 - +4.0 352,839 - +0.1 352,839 - +1.2 352,839 - -0.3 352,839 - +1.6 352,889 + HUW76_01795 0.15 -1.7 352,897 - HUW76_01795 0.16 -1.1 352,916 - HUW76_01795 0.19 +3.9 352,916 - HUW76_01795 0.19 -0.5 352,919 - HUW76_01795 0.19 +0.6 352,919 - HUW76_01795 0.19 -0.2 352,983 + HUW76_01795 0.27 -0.6 352,997 + HUW76_01795 0.29 -0.9 353,029 + HUW76_01795 0.33 -1.2 353,029 + HUW76_01795 0.33 +0.4 353,033 + HUW76_01795 0.33 +1.6 353,041 - HUW76_01795 0.34 +0.7 353,043 + HUW76_01795 0.34 -0.8 353,043 + HUW76_01795 0.34 +0.8 353,043 + HUW76_01795 0.34 -0.8 353,043 + HUW76_01795 0.34 -0.3 353,044 + HUW76_01795 0.34 -0.4 353,051 - HUW76_01795 0.35 -1.3 353,051 - HUW76_01795 0.35 +1.8 353,052 - HUW76_01795 0.35 +1.5 353,052 - HUW76_01795 0.35 -0.6 353,206 + HUW76_01795 0.54 +0.7 353,206 + HUW76_01795 0.54 -1.1 353,211 + HUW76_01795 0.55 -0.5 353,211 + HUW76_01795 0.55 -1.0 353,218 - HUW76_01795 0.56 +3.7 353,256 + HUW76_01795 0.60 -0.9 353,256 + HUW76_01795 0.60 -0.9 353,258 + HUW76_01795 0.61 +1.7 353,258 + HUW76_01795 0.61 +0.4 353,301 + HUW76_01795 0.66 -1.1 353,310 + HUW76_01795 0.67 -2.5 353,341 + HUW76_01795 0.71 -0.9 353,342 + HUW76_01795 0.71 +0.5 353,342 + HUW76_01795 0.71 +4.4 353,342 + HUW76_01795 0.71 +2.4 353,404 + HUW76_01795 0.79 +2.6 353,404 + HUW76_01795 0.79 -0.5 353,405 + HUW76_01795 0.79 +2.6 353,405 + HUW76_01795 0.79 +0.8 353,416 + HUW76_01795 0.80 -0.9 353,452 + HUW76_01795 0.84 -0.7 353,452 + HUW76_01795 0.84 -0.6 353,452 + HUW76_01795 0.84 +1.3 353,524 - +2.7 353,613 + +1.5 353,613 - +1.2 353,630 - -0.1 353,630 - +3.8 353,717 + HUW76_01800 0.12 +0.1 353,723 - HUW76_01800 0.12 +1.6 353,723 - HUW76_01800 0.12 +2.5 353,765 + HUW76_01800 0.16 -1.8 353,770 + HUW76_01800 0.17 +0.2 353,770 + HUW76_01800 0.17 +1.1 353,770 + HUW76_01800 0.17 +2.1 353,770 + HUW76_01800 0.17 +0.2 353,856 - HUW76_01800 0.25 +1.6 353,962 - HUW76_01800 0.35 +0.2 354,116 + HUW76_01800 0.50 -1.5 354,116 + HUW76_01800 0.50 -0.3 354,124 - HUW76_01800 0.51 +0.6 354,145 + HUW76_01800 0.53 -1.4 354,147 + HUW76_01800 0.53 +1.1 354,163 + HUW76_01800 0.55 -0.4 354,163 + HUW76_01800 0.55 -0.1 354,171 - HUW76_01800 0.55 +2.7 354,192 + HUW76_01800 0.57 +0.5 354,211 + HUW76_01800 0.59 -0.3 354,211 + HUW76_01800 0.59 -0.5 354,216 - HUW76_01800 0.60 -0.2 354,216 - HUW76_01800 0.60 +0.2 354,218 + HUW76_01800 0.60 -0.8 354,218 + HUW76_01800 0.60 +0.3 354,218 - HUW76_01800 0.60 +0.9 354,226 - HUW76_01800 0.61 +1.0 354,226 - HUW76_01800 0.61 +4.4 354,226 - HUW76_01800 0.61 +4.2 354,226 - HUW76_01800 0.61 +1.1 354,226 - HUW76_01800 0.61 +2.2 354,226 - HUW76_01800 0.61 +1.0 354,238 + HUW76_01800 0.62 -0.9 354,238 + HUW76_01800 0.62 -1.0 354,245 - HUW76_01800 0.63 +0.4 354,245 - HUW76_01800 0.63 +3.7 354,246 - HUW76_01800 0.63 +0.4 354,246 - HUW76_01800 0.63 -0.5 354,276 + HUW76_01800 0.66 +0.3 354,276 + HUW76_01800 0.66 +0.5 354,327 + HUW76_01800 0.70 +1.5 354,374 + HUW76_01800 0.75 -1.8 354,385 + HUW76_01800 0.76 -0.6 354,385 + HUW76_01800 0.76 +0.3 354,385 + HUW76_01800 0.76 -0.3 354,385 + HUW76_01800 0.76 -1.2 354,385 + HUW76_01800 0.76 +4.4 354,385 + HUW76_01800 0.76 +0.8 354,385 + HUW76_01800 0.76 +0.2 354,393 - HUW76_01800 0.77 +2.2 354,393 - HUW76_01800 0.77 +2.1 354,395 + HUW76_01800 0.77 -0.9 354,395 + HUW76_01800 0.77 -1.6 354,403 - HUW76_01800 0.78 +2.2 354,454 + HUW76_01800 0.83 -1.2 354,454 + HUW76_01800 0.83 -0.7 354,462 - HUW76_01800 0.83 +6.2 354,462 - HUW76_01800 0.83 +3.8 354,493 + HUW76_01800 0.86 -2.0 354,509 + HUW76_01800 0.88 -0.3 354,543 + +1.0 354,543 + -0.9 354,551 + +0.9 354,551 - +5.7 354,551 - +2.9 354,565 + -0.3 354,565 + +0.3 354,565 + +1.3 354,565 + +1.0 354,572 + +1.5 354,572 + +0.4
Or see this region's nucleotide sequence