Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS18080

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
3,974,668	+				-3.1
3,974,669	-				-0.8
3,974,669	-				-1.0
3,974,746	+		LRK53_RS18075	0.16	-0.6
3,974,746	+		LRK53_RS18075	0.16	-1.8
3,974,747	-		LRK53_RS18075	0.16	-1.6
3,974,900	+		LRK53_RS18075	0.30	-0.6
3,974,900	+		LRK53_RS18075	0.30	-0.6
3,974,900	+		LRK53_RS18075	0.30	+0.4
3,974,901	-		LRK53_RS18075	0.30	-1.2
3,975,085	+		LRK53_RS18075	0.47	-0.5
3,975,086	-		LRK53_RS18075	0.47	-0.0
3,975,106	+		LRK53_RS18075	0.48	-1.5
3,975,106	+		LRK53_RS18075	0.48	+1.0
3,975,106	+		LRK53_RS18075	0.48	+1.0
3,975,106	+		LRK53_RS18075	0.48	-1.5
3,975,107	-		LRK53_RS18075	0.49	-1.7
3,975,107	-		LRK53_RS18075	0.49	-0.6
3,975,107	-		LRK53_RS18075	0.49	-1.3
3,975,107	-		LRK53_RS18075	0.49	+0.3
3,975,262	+		LRK53_RS18075	0.63	+2.6
3,975,262	+		LRK53_RS18075	0.63	+2.0
3,975,262	+		LRK53_RS18075	0.63	-1.0
3,975,262	+		LRK53_RS18075	0.63	-1.2
3,975,263	-		LRK53_RS18075	0.63	-1.0
3,975,388	+		LRK53_RS18075	0.74	-0.0
3,975,388	+		LRK53_RS18075	0.74	-1.1
3,975,388	+		LRK53_RS18075	0.74	-0.6
3,975,388	+		LRK53_RS18075	0.74	-0.0
3,975,388	+		LRK53_RS18075	0.74	-1.6
3,975,388	+		LRK53_RS18075	0.74	-1.6
3,975,388	+		LRK53_RS18075	0.74	-1.3
3,975,388	+		LRK53_RS18075	0.74	-1.0
3,975,388	+		LRK53_RS18075	0.74	+1.0
3,975,388	+		LRK53_RS18075	0.74	+0.1
3,975,389	-		LRK53_RS18075	0.74	+0.4
3,975,389	-		LRK53_RS18075	0.74	-1.6
3,975,389	-		LRK53_RS18075	0.74	-0.8
3,975,389	-		LRK53_RS18075	0.74	+1.7
3,975,389	-		LRK53_RS18075	0.74	-1.2
3,975,389	-		LRK53_RS18075	0.74	-1.6
3,975,389	-		LRK53_RS18075	0.74	-1.0
3,975,389	-		LRK53_RS18075	0.74	-0.0
3,975,389	-		LRK53_RS18075	0.74	-0.0
3,975,389	-		LRK53_RS18075	0.74	-1.8
3,975,389	-		LRK53_RS18075	0.74	-0.0
3,975,810	+				-0.0
3,975,810	+				-1.0
3,975,811	-				-0.9
3,975,811	-				+0.7
3,975,811	-				+1.0
3,975,819	+				-1.0
3,975,819	+				+1.6
3,975,819	+				-1.0
3,975,819	+				+1.0
3,975,820	-				-1.3
3,975,820	-				-0.9
3,976,158	+		LRK53_RS18080	0.30	-2.3
3,976,158	+		LRK53_RS18080	0.30	+1.0
3,976,159	-		LRK53_RS18080	0.30	-0.0
3,976,177	-		LRK53_RS18080	0.31	-1.0
3,976,177	-		LRK53_RS18080	0.31	-0.0
3,976,477	-		LRK53_RS18080	0.50	-0.5
3,976,678	-		LRK53_RS18080	0.62	-1.3
3,976,686	+		LRK53_RS18080	0.62	+1.0
3,976,687	-		LRK53_RS18080	0.62	-1.3
3,976,687	-		LRK53_RS18080	0.62	+0.3
3,976,687	-		LRK53_RS18080	0.62	+1.0
3,976,687	-		LRK53_RS18080	0.62	-1.1
3,976,773	+		LRK53_RS18080	0.68	-0.0
3,976,774	-		LRK53_RS18080	0.68	-1.0
3,976,791	+		LRK53_RS18080	0.69	-1.8
3,976,791	+		LRK53_RS18080	0.69	-1.2
3,976,791	+		LRK53_RS18080	0.69	+1.0
3,976,791	+		LRK53_RS18080	0.69	-0.0
3,976,792	-		LRK53_RS18080	0.69	-1.0
3,976,792	-		LRK53_RS18080	0.69	-1.0
3,976,792	-		LRK53_RS18080	0.69	-0.0
3,976,792	-		LRK53_RS18080	0.69	-0.6
3,976,830	+		LRK53_RS18080	0.71	-0.8
3,976,830	+		LRK53_RS18080	0.71	-0.6
3,976,830	+		LRK53_RS18080	0.71	-1.3
3,976,831	-		LRK53_RS18080	0.71	+1.0
3,977,106	+		LRK53_RS18080	0.88	-0.6
3,977,106	+		LRK53_RS18080	0.88	-0.4
3,977,106	+		LRK53_RS18080	0.88	-2.0
3,977,106	+		LRK53_RS18080	0.88	+2.6
3,977,106	+		LRK53_RS18080	0.88	-0.0
3,977,106	+		LRK53_RS18080	0.88	-2.5
3,977,107	-		LRK53_RS18080	0.88	-0.0
3,977,107	-		LRK53_RS18080	0.88	-0.8
3,977,107	-		LRK53_RS18080	0.88	-0.9
3,977,107	-		LRK53_RS18080	0.88	-2.0
3,977,266	+				-0.9
3,977,267	-				+0.4
3,977,267	-				-0.7
3,977,267	-				-0.0
3,977,267	-				-0.3
3,977,267	-				-0.0
3,977,317	-				+2.6
3,977,317	-				+0.1
3,977,317	-				+2.3
3,977,317	-				-0.3
3,977,317	-				-1.0
3,977,385	+				+0.4
3,977,385	+				-0.6
3,977,385	+				+1.0
3,977,385	+				-0.6
3,977,403	+				-0.0
3,977,403	+				-0.0
3,977,780	+		LRK53_RS18085	0.21	-0.6
3,977,780	+		LRK53_RS18085	0.21	-0.0
3,977,780	+		LRK53_RS18085	0.21	+0.4
3,977,781	-		LRK53_RS18085	0.22	-0.6
3,977,781	-		LRK53_RS18085	0.22	-1.6
3,977,781	-		LRK53_RS18085	0.22	-1.0
3,977,854	+		LRK53_RS18085	0.26	-0.8
3,977,854	+		LRK53_RS18085	0.26	-1.8
3,977,903	+		LRK53_RS18085	0.29	-0.0
3,977,903	+		LRK53_RS18085	0.29	-1.0
3,977,903	+		LRK53_RS18085	0.29	-0.2
3,977,904	-		LRK53_RS18085	0.29	-2.0
3,977,904	-		LRK53_RS18085	0.29	-0.6
3,977,904	-		LRK53_RS18085	0.29	+1.6
3,977,904	-		LRK53_RS18085	0.29	-0.6
3,978,053	+		LRK53_RS18085	0.38	+1.0
3,978,053	+		LRK53_RS18085	0.38	+1.0
3,978,054	-		LRK53_RS18085	0.38	+1.0
3,978,054	-		LRK53_RS18085	0.38	-0.0
3,978,065	+		LRK53_RS18085	0.39	+0.6
3,978,065	+		LRK53_RS18085	0.39	-0.6
3,978,065	+		LRK53_RS18085	0.39	-0.2
3,978,066	-		LRK53_RS18085	0.39	-0.6
3,978,066	-		LRK53_RS18085	0.39	-1.6
3,978,066	-		LRK53_RS18085	0.39	+0.4
3,978,066	-		LRK53_RS18085	0.39	-1.0
3,978,161	+		LRK53_RS18085	0.45	+2.0
3,978,161	+		LRK53_RS18085	0.45	-0.6
3,978,162	-		LRK53_RS18085	0.45	-0.0
3,978,185	+		LRK53_RS18085	0.46	-3.5
3,978,185	+		LRK53_RS18085	0.46	-0.8
3,978,185	+		LRK53_RS18085	0.46	-0.6
3,978,186	-		LRK53_RS18085	0.46	-0.6
3,978,186	-		LRK53_RS18085	0.46	-0.8
3,978,186	-		LRK53_RS18085	0.46	-1.0
3,978,288	-		LRK53_RS18085	0.52	-0.3
3,978,288	-		LRK53_RS18085	0.52	+1.0
3,978,288	-		LRK53_RS18085	0.52	-0.0
3,978,288	-		LRK53_RS18085	0.52	-1.3