Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS18025

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
3,967,261	+		LRK53_RS18020	0.59	-1.3
3,967,261	+		LRK53_RS18020	0.59	-2.7
3,967,261	+		LRK53_RS18020	0.59	-1.0
3,967,261	+		LRK53_RS18020	0.59	-0.4
3,967,261	+		LRK53_RS18020	0.59	-0.8
3,967,262	-		LRK53_RS18020	0.59	+0.4
3,967,262	-		LRK53_RS18020	0.59	-0.6
3,967,262	-		LRK53_RS18020	0.59	-1.4
3,967,262	-		LRK53_RS18020	0.59	+0.6
3,967,414	+		LRK53_RS18020	0.74	-0.0
3,967,415	-		LRK53_RS18020	0.74	-0.6
3,967,415	-		LRK53_RS18020	0.74	-0.6
3,967,415	-		LRK53_RS18020	0.74	-0.0
3,967,415	-		LRK53_RS18020	0.74	-0.8
3,967,484	+		LRK53_RS18020	0.80	+2.6
3,967,485	-		LRK53_RS18020	0.81	-0.2
3,967,485	-		LRK53_RS18020	0.81	-0.2
3,967,551	-		LRK53_RS18020	0.87	-1.3
3,967,551	-		LRK53_RS18020	0.87	-0.0
3,967,573	+		LRK53_RS18020	0.89	-0.0
3,967,573	+		LRK53_RS18020	0.89	+0.7
3,967,573	+		LRK53_RS18020	0.89	+0.2
3,967,573	+		LRK53_RS18020	0.89	-0.5
3,967,573	+		LRK53_RS18020	0.89	-1.0
3,967,573	+		LRK53_RS18020	0.89	-1.5
3,967,573	+		LRK53_RS18020	0.89	-0.8
3,967,573	+		LRK53_RS18020	0.89	-0.3
3,967,573	+		LRK53_RS18020	0.89	+0.6
3,967,573	+		LRK53_RS18020	0.89	+2.0
3,967,573	+		LRK53_RS18020	0.89	-0.6
3,967,573	+		LRK53_RS18020	0.89	-0.8
3,967,573	+		LRK53_RS18020	0.89	+1.0
3,967,573	+		LRK53_RS18020	0.89	-1.6
3,967,574	-		LRK53_RS18020	0.89	-2.2
3,967,574	-		LRK53_RS18020	0.89	-0.3
3,967,574	-		LRK53_RS18020	0.89	+0.4
3,967,574	-		LRK53_RS18020	0.89	+1.6
3,967,574	-		LRK53_RS18020	0.89	-2.0
3,967,574	-		LRK53_RS18020	0.89	-0.0
3,967,574	-		LRK53_RS18020	0.89	-0.0
3,967,574	-		LRK53_RS18020	0.89	-1.7
3,967,574	-		LRK53_RS18020	0.89	-1.3
3,967,574	-		LRK53_RS18020	0.89	-0.4
3,967,574	-		LRK53_RS18020	0.89	-0.0
3,967,574	-		LRK53_RS18020	0.89	-0.7
3,967,574	-		LRK53_RS18020	0.89	-2.8
3,967,598	-				-0.8
3,967,598	-				-1.8
3,967,598	-				-0.7
3,967,598	-				+1.0
3,967,659	+				+1.0
3,967,660	-				-0.0
3,967,688	+				+0.3
3,967,688	+				-0.0
3,967,688	+				+0.4
3,967,688	+				-0.6
3,967,688	+				-0.6
3,967,688	+				-0.3
3,967,688	+				-0.4
3,967,688	+				+0.1
3,967,688	+				-1.4
3,967,688	+				-0.9
3,967,688	+				-0.0
3,967,689	-				-1.6
3,967,689	-				-0.0
3,967,689	-				+0.4
3,967,689	-				-2.2
3,967,689	-				+2.0
3,967,771	+				+2.0
3,967,771	+				-0.1
3,967,771	+				-1.0
3,967,772	-				-0.6
3,967,772	-				-1.6
3,967,811	-				-0.8
3,967,811	-				-1.0
3,967,811	-				-0.3
3,967,840	+				-1.2
3,967,841	-				-0.0
3,967,844	+				-0.0
3,967,844	+				+2.0
3,967,844	+				-1.6
3,967,845	-				-0.8
3,967,845	-				-0.7
3,967,857	+				-1.3
3,967,858	-				+0.7
3,967,872	+				-0.0
3,967,872	+				-2.2
3,967,873	-				-0.0
3,967,873	-				-0.6
3,967,873	-				+0.4
3,967,914	+				-0.9
3,967,914	+				-0.4
3,967,915	-				-0.6
3,967,915	-				-0.0
3,967,915	-				-0.4
3,967,915	-				+0.3
3,967,916	+				-0.0
3,967,916	+				-0.0
3,967,917	-				+0.3
3,967,917	-				+0.1
3,967,948	+				-1.3
3,967,999	+				-0.3
3,967,999	+				-0.0
3,967,999	+				+0.4
3,967,999	+				-0.3
3,967,999	+				-0.2
3,968,057	+				-0.0
3,968,058	-				-0.2
3,968,058	-				-0.0
3,968,058	-				-0.4
3,968,058	-				-0.7
3,968,062	+				-0.8
3,968,153	-		LRK53_RS18025	0.20	-1.4
3,968,228	+		LRK53_RS18025	0.59	-1.3
3,968,229	-		LRK53_RS18025	0.60	-0.6
3,968,406	-				-0.7
3,968,406	-				-0.0
3,968,406	-				-0.1
3,968,423	+				+1.0
3,968,446	-		LRK53_RS18030	0.12	-1.3
3,968,531	+		LRK53_RS18030	0.32	-0.4
3,968,531	+		LRK53_RS18030	0.32	-0.7
3,968,532	-		LRK53_RS18030	0.32	-1.6
3,968,532	-		LRK53_RS18030	0.32	-0.8
3,968,532	-		LRK53_RS18030	0.32	-0.0
3,968,532	-		LRK53_RS18030	0.32	-0.9
3,968,548	+		LRK53_RS18030	0.35	+0.3
3,968,549	-		LRK53_RS18030	0.36	-0.0
3,968,549	-		LRK53_RS18030	0.36	+0.6
3,968,669	+		LRK53_RS18030	0.63	-1.6
3,968,670	-		LRK53_RS18030	0.63	-0.6
3,968,684	-		LRK53_RS18030	0.66	-0.5
3,968,684	-		LRK53_RS18030	0.66	-1.3
3,968,684	-		LRK53_RS18030	0.66	-0.6
3,968,684	-		LRK53_RS18030	0.66	+0.3
3,968,684	-		LRK53_RS18030	0.66	-2.3
3,968,687	+		LRK53_RS18030	0.67	-0.0
3,968,688	-		LRK53_RS18030	0.67	-0.0
3,968,688	-		LRK53_RS18030	0.67	-0.4
3,968,704	+		LRK53_RS18030	0.71	-1.3
3,968,704	+		LRK53_RS18030	0.71	-1.0
3,968,704	+		LRK53_RS18030	0.71	-0.7
3,968,705	-		LRK53_RS18030	0.71	-0.0
3,968,705	-		LRK53_RS18030	0.71	+0.7
3,968,705	-		LRK53_RS18030	0.71	-2.0
3,968,741	+		LRK53_RS18030	0.79	-0.8
3,968,742	-		LRK53_RS18030	0.79	+0.1
3,968,742	-		LRK53_RS18030	0.79	-1.4
3,968,742	-		LRK53_RS18030	0.79	-0.5
3,968,813	+				-0.0
3,968,813	+				-0.0
3,968,813	+				-0.0
3,968,813	+				-1.3
3,968,814	-				-0.6
3,968,822	+				+0.4
3,968,822	+				-0.6
3,968,822	+				-0.3
3,968,823	-				+0.7
3,968,830	+				-1.3
3,968,830	+				-0.2
3,968,831	-				-0.3
3,968,856	-				-1.0
3,968,867	+				+0.3
3,968,867	+				-0.5
3,968,867	+				+1.0
3,968,867	+				+1.0
3,968,868	-				-1.3
3,968,868	-				+1.0
3,968,935	+				+1.6
3,968,935	+				+2.0
3,968,935	+				-0.2
3,968,936	-				-0.0
3,969,012	+		LRK53_RS18035	0.16	+0.1
3,969,013	-		LRK53_RS18035	0.16	+2.0
3,969,026	-		LRK53_RS18035	0.19	-0.6
3,969,051	-		LRK53_RS18035	0.24	-0.0
3,969,051	-		LRK53_RS18035	0.24	-0.6
3,969,057	+		LRK53_RS18035	0.25	-0.0
3,969,057	+		LRK53_RS18035	0.25	-0.5
3,969,057	+		LRK53_RS18035	0.25	-0.4
3,969,057	+		LRK53_RS18035	0.25	-0.6
3,969,057	+		LRK53_RS18035	0.25	+2.0
3,969,058	-		LRK53_RS18035	0.25	-0.9
3,969,058	-		LRK53_RS18035	0.25	-0.6
3,969,058	-		LRK53_RS18035	0.25	-0.6
3,969,058	-		LRK53_RS18035	0.25	-1.0
3,969,065	-		LRK53_RS18035	0.27	-1.0
3,969,082	+		LRK53_RS18035	0.30	-1.0
3,969,116	+		LRK53_RS18035	0.37	-2.5
3,969,133	+		LRK53_RS18035	0.41	+0.4
3,969,134	-		LRK53_RS18035	0.41	-0.5
3,969,134	-		LRK53_RS18035	0.41	-0.9
3,969,134	-		LRK53_RS18035	0.41	-0.0
3,969,134	-		LRK53_RS18035	0.41	-0.0
3,969,179	-		LRK53_RS18035	0.50	+0.3
3,969,190	+		LRK53_RS18035	0.52	-0.6
3,969,191	-		LRK53_RS18035	0.52	+1.0
3,969,213	-		LRK53_RS18035	0.57	-0.8
3,969,221	+		LRK53_RS18035	0.59	+1.0
3,969,222	-		LRK53_RS18035	0.59	-0.0
3,969,236	+		LRK53_RS18035	0.62	-0.3
3,969,236	+		LRK53_RS18035	0.62	-1.0